The complete mitochondrial genome of the striped-tailed rat-snake, Orthriophis taeniurus (Reptilia, Serpentes, Colubridae)

Abstract The complete mitochondrial genome (mitogenome) of the striped-tailed rat-snake Orthriophis taeniurus was determined in the present study. The genome is 17,183 bp in size, containing 2 ribosomal RNA (rRNA) genes, 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, and 2 control regions (CRI and CRII). The gene order and orientation in O. taeniurus mitogenome are basically identical to that of other alethinophidian snakes. Nucleotide composition is very similar with other vertebrates, showing an AT bias.

[1]  U. Hwang,et al.  Complete mitochondrial genome of the black-headed snake Sibynophis collaris (Squamata, Serpentes, Colubridae) , 2011, Mitochondrial DNA.

[2]  M. He,et al.  The complete mitochondrial genome of the Sichuan hot-spring keel-back (Thermophis zhaoermii; Serpentes: Colubridae) and a mitogenomic phylogeny of the snakes , 2010, Mitochondrial DNA.

[3]  J. Macey,et al.  Vicariance and dispersal form a ring distribution in nightsnakes around the Gulf of California. , 2009, Molecular phylogenetics and evolution.

[4]  Shunping He,et al.  The complete mitochondrial DNA sequence and the phylogenetic position of Achalinus meiguensis (Reptilia: Squamata) , 2009 .

[5]  Young Uk Kim,et al.  Mitome: dynamic and interactive database for comparative mitochondrial genomics in metazoan animals , 2007, Nucleic Acids Res..

[6]  Xiaobing Wu,et al.  Rearrangement of a mitochondrial tRNA gene of the concave-eared torrent frog, Amolops tormotus. , 2007, Gene.

[7]  Graziano Pesole,et al.  Mitochondrial DNA in metazoa: degree of freedom in a frozen event. , 2002, Gene.

[8]  J. Boore Complete mitochondrial genome sequence of the polychaete annelid Platynereis dumerilii. , 2001, Molecular biology and evolution.

[9]  J. Boore Animal mitochondrial genomes. , 1999, Nucleic acids research.

[10]  M. Nishida,et al.  The complete nucleotide sequence of a snake (Dinodon semicarinatus) mitochondrial genome with two identical control regions. , 1998, Genetics.

[11]  Julio Montoya,et al.  tRNA punctuation model of RNA processing in human mitochondria , 1981, Nature.

[12]  M. Ruf,et al.  Molecular Systematics and Phylogeny of Old and New World Ratsnakes, Elaphe Auct., and Related Genera (Reptilia, Squamata, Colubridae) , 2002 .

[13]  G. Shadel,et al.  Mitochondrial DNA maintenance in vertebrates. , 1997, Annual review of biochemistry.

[14]  D. Clayton Nuclear gadgets in mitochondrial DNA replication and transcription. , 1991, Trends in biochemical sciences.