Cryo electron tomography of vitrified fibroblasts: microtubule plus ends in situ.

Mouse embryonic fibroblasts (MEFs) are cells that have highly suitable biophysical properties for cellular cryo electron tomography. MEFs can be grown directly on carbon supported by EM grids. They stretch out and grow thinner than 500nm over major parts of the cell, attaining a minimal thickness of 50nm at their cortex. This facilitates direct cryo-fixation by plunge-freezing and high resolution cryo electron tomography. Both by direct cryo electron microscopy projection imaging and cryo electron tomography of vitrified MEFs we visualized a variety of cellular structures like ribosomes, vesicles, mitochondria, rough endoplasmatic reticulum, actin filaments, intermediate filaments and microtubules. MEFs are primary cells that closely resemble native tissue and are highly motile. Therefore, they are attractive for studying cytoskeletal elements. Here we report on structural investigations of microtubule plus ends. We were able to visualize single frayed protofilaments at the microtubule plus end in vitrified fibroblasts using cryo electron tomography. Furthermore, it appeared that MEFs contain densities inside their microtubules, although 2.5-3.5 times less than in neuronal cells [Garvalov, B.K., Zuber, B., Bouchet-Marquis, C., Kudryashev, M., Gruska, M., Beck, M., Leis, A., Frischknecht, F., Bradke, F., Baumeister, W., Dubochet, J., and Cyrklaff, M. 2006. Luminal particles within cellular microtubules. J. Cell Biol. 174, 759-765]. Projection imaging of cellular microtubule plus ends showed that 40% was frayed, which is two times more than expected when compared to microtubule growth and shrinkage rates in MEFs. This suggests that frayed ends might be stabilized in the cell cortex.

[1]  D. Mastronarde,et al.  Organization of interphase microtubules in fission yeast analyzed by electron tomography. , 2007, Developmental cell.

[2]  F. Förster,et al.  Identification of macromolecular complexes in cryoelectron tomograms of phantom cells , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[3]  A S Frangakis,et al.  Noise reduction in electron tomographic reconstructions using nonlinear anisotropic diffusion. , 2001, Journal of structural biology.

[4]  J. M. Seguí-Simarro,et al.  Quantitative analysis of changes in spatial distribution and plus-end geometry of microtubules involved in plant-cell cytokinesis , 2005, Journal of Cell Science.

[5]  E. Mandelkow Microtubule dynamics and microtubule caps: a time-resolved cryo- electron microscopy study , 1991, Journal of Cell Biology.

[6]  D. DeRosier,et al.  The reconstruction of a three-dimensional structure from projections and its application to electron microscopy , 1970, Proceedings of the Royal Society of London. A. Mathematical and Physical Sciences.

[7]  K. Downing,et al.  Characterization of intact subcellular bodies in whole bacteria by cryo‐electron tomography and spectroscopic imaging , 2006, Journal of microscopy.

[8]  J. Frank,et al.  Towards high-resolution three-dimensional imaging of native mammalian tissue: electron tomography of frozen-hydrated rat liver sections. , 2006, Journal of structural biology.

[9]  Feng Chen,et al.  Rac1-null mouse embryonic fibroblasts are motile and respond to platelet-derived growth factor. , 2006, Molecular biology of the cell.

[10]  Julio O. Ortiz,et al.  Mapping 70S ribosomes in intact cells by cryoelectron tomography and pattern recognition. , 2006, Journal of structural biology.

[11]  Martin Beck,et al.  Organization of Actin Networks in Intact Filopodia , 2007, Current Biology.

[12]  W. Baumeister,et al.  Macromolecular Architecture in Eukaryotic Cells Visualized by Cryoelectron Tomography , 2002, Science.

[13]  W. Baumeister,et al.  Electron tomography of ice-embedded prokaryotic cells. , 1998, Biophysical journal.

[14]  D Typke,et al.  Determination of the inelastic mean free path in ice by examination of tilted vesicles and automated most probable loss imaging. , 1996, Ultramicroscopy.

[15]  J R Kremer,et al.  Computer visualization of three-dimensional image data using IMOD. , 1996, Journal of structural biology.

[16]  J. Chilton,et al.  Tubulin tyrosination is a major factor affecting the recruitment of CAP-Gly proteins at microtubule plus ends , 2006, The Journal of cell biology.

[17]  W. Baumeister,et al.  Perspectives of molecular and cellular electron tomography. , 1997, Journal of structural biology.

[18]  A S Frangakis,et al.  Cryo-electron tomography of neurospora mitochondria. , 2000, Journal of structural biology.

[19]  J. Dubochet,et al.  Cryo-electron microscopy of vitrified specimens , 1988, Quarterly Reviews of Biophysics.

[20]  C. Hoogenraad,et al.  Microtubule plus-end-tracking proteins: mechanisms and functions. , 2005, Current opinion in cell biology.

[21]  Achilleas S Frangakis,et al.  Visualization of cell microtubules in their native state , 2007, Biology of the cell.

[22]  Anthony A. Hyman,et al.  Morphologically distinct microtubule ends in the mitotic centrosome of Caenorhabditis elegans , 2003, The Journal of cell biology.

[23]  G. Murphy,et al.  In situ structure of the complete Treponema primitia flagellar motor , 2006, Nature.

[24]  Reiner Hegerl,et al.  Pyrodictium cannulae enter the periplasmic space but do not enter the cytoplasm, as revealed by cryo-electron tomography. , 2003, Journal of structural biology.

[25]  K. Downing,et al.  Molecular architecture of axonemal microtubule doublets revealed by cryo-electron tomography , 2006, Nature.

[26]  P. Hawkes,et al.  Science of Microscopy , 2007 .

[27]  N. Galjart,et al.  Cytoplasmic linker proteins promote microtubule rescue in vivo , 2002, The Journal of cell biology.

[28]  J. Dubochet,et al.  Luminal particles within cellular microtubules , 2006, The Journal of cell biology.

[29]  Chris I. De Zeeuw,et al.  CLASPs Are CLIP-115 and -170 Associating Proteins Involved in the Regional Regulation of Microtubule Dynamics in Motile Fibroblasts , 2001, Cell.

[30]  J. McIntosh,et al.  The Molecular Architecture of Axonemes Revealed by Cryoelectron Tomography , 2006, Science.

[31]  J. Frank Electron tomography : methods for three-dimensional visualization of structures in the cell , 2005 .

[32]  Bruce F. McEwen,et al.  Kinetochores Use a Novel Mechanism for Coordinating the Dynamics of Individual Microtubules , 2006, Current Biology.

[33]  A. Frangakis,et al.  Structural analysis of Mycoplasma pneumoniae by cryo-electron tomography. , 2006, Journal of structural biology.

[34]  J. Dubochet,et al.  Cryo-electron microscopy of vitreous sections of native biological cells and tissues. , 2004, Journal of structural biology.