The Significance of Exo1 K589E Polymorphism on Cancer Susceptibility: Evidence Based on a Meta-Analysis

The exonuclease1 (Exo1) gene is a key component of mismatch repair (MMR) by resecting the damaged strand, which is the only exonuclease involved in the human MMR system. The gene product is a member of the RAD2 nuclease family and functions in DNA replication, repair and recombination. However, whether Exo1 is required to activate MMR-dependent DNA damage response (DDR) remains unknown, the conclusions of the Exo1 polymorphisms on cancer susceptibility studies were not consistent. We carried out a meta-analysis of 7 case-control studies to clarify the association between the Exo1 K589E polymorphism and cancer risk. Overall,a significant association of the Exo1 K589E polymorphism with cancer risk in all genetic models (Lys vs Glu: OR = 1.51, 95%CI:1.39–1.99, P<0.01; Glu/Lys vs Glu/Glu: OR = 1.43, 95%CI:1.28–1.60, P<0.01; Lys/Lys vs Glu/Glu: OR = 2.45, 95%CI:1.90–3.17, P<0.01; Lys/Lys+Glu/Lys vs Glu/Glu: OR = 1.53, 95%CI:1.38–1.71, P<0.01; Glu/Glu vs Glu/Lys+Lys/Lys: OR =  2.27, 95%CI:1.79–2.89, P<0.01). In the stratified analysis by ethnicity, significantly increased risk was observed in Asian population (Lys vs Glu: OR = 1.53, 95%CI:1.39–1.69, P<0.01; Glu/Lys vs Glu/Glu: OR = 1.50, 95%CI:1.34–1.69, P<0.01; Lys/Lys vs Glu/Glu: OR = 2.48, 95%CI:1.84–3.34, P<0.01; Lys/Lys+Glu/Lys vs Glu/Glu: OR = 1.58, 95%CI:1.41–1.78, P<0.01; Glu/Glu vs Glu/Lys+Lys/Lys: OR = 2.18, 95%CI:1.62–2.93, P<0.01). Subgroup analysis based on smoking suggested Exo1 K589E polymorphism conferred significant risk among smokers (Lys/Lys+Glu/Lys vs Glu/Glu: OR = 2.16, 95%CI:1.77–2.63, P<0.01), but not in non-smokers (Lys/Lys+Glu/Lys vs Glu/Glu: OR = 0.89, 95%CI:0.64–1.24, P = 0.50). In conclusion, Exo1 K589E Lys allele may be used as a novel biomarker for cancer susceptibility, particularly in smokers.

[1]  Gong Yang,et al.  Aurora-A: a potential DNA repair modulator , 2014, Tumor Biology.

[2]  Sheng-li Yan,et al.  Significant associations between X-ray repair cross-complementing group 3 genetic polymorphisms and thyroid cancer risk , 2014, Tumor Biology.

[3]  S. Kapoor The emerging role of hOGG1 Ser326Cys polymorphisms in gastrointestinal carcinogenesis. , 2013, European journal of gastroenterology & hepatology.

[4]  Chen-Yang Shen,et al.  EGFR exon 19 in‐frame deletion and polymorphisms of DNA repair genes in never‐smoking female lung adenocarcinoma patients , 2013, International journal of cancer.

[5]  K. Brown,et al.  Exonuclease 1 (Exo1) is required for activating response to S(N)1 DNA methylating agents. , 2012, DNA repair.

[6]  H. Akkız,et al.  The significance of Exonuclease 1 K589E polymorphism on hepatocellular carcinoma susceptibility in the Turkish population: a case–control study , 2012, Molecular Biology Reports.

[7]  C. Lim,et al.  A Single Nucleotide Polymorphism in EXO1 Gene Is Associated With Cervical Cancer Susceptibility in Chinese Patients , 2011, International Journal of Gynecologic Cancer.

[8]  C. Hsiung,et al.  Single-nucleotide polymorphism of the Exo1 gene: association with gastric cancer susceptibility and interaction with smoking in Taiwan. , 2009, The Chinese journal of physiology.

[9]  Chia-Wen Tsai,et al.  Association of genetic polymorphisms of EXO1 gene with risk of breast cancer in Taiwan. , 2009, Anticancer research.

[10]  M. Tsai,et al.  Interaction of Exo1 genotypes and smoking habit in oral cancer in Taiwan. , 2009, Oral oncology.

[11]  Q. Wei,et al.  DNA repair phenotype and cancer susceptibility—A mini review , 2009, International journal of cancer.

[12]  D. Bau,et al.  Lung cancer susceptibility and genetic polymorphisms of Exo1 gene in Taiwan. , 2009, Anticancer research.

[13]  Hongbing Shen,et al.  Potentially functional polymorphisms of EXO1 and risk of lung cancer in a Chinese population: A case-control analysis. , 2008, Lung cancer.

[14]  Alexander R. Pico,et al.  Pathway Analysis of Single-Nucleotide Polymorphisms Potentially Associated with Glioblastoma Multiforme Susceptibility Using Random Forests , 2008, Cancer Epidemiology Biomarkers & Prevention.

[15]  Marco Foiani,et al.  Regulation of DNA repair throughout the cell cycle , 2008, Nature Reviews Molecular Cell Biology.

[16]  L. Symington,et al.  EXO1-A multi-tasking eukaryotic nuclease. , 2004, DNA repair.

[17]  K. Kinzler,et al.  Cancer genes and the pathways they control , 2004, Nature Medicine.

[18]  Chien-Jen Chen,et al.  Nasopharyngeal carcinoma and genetic polymorphisms of DNA repair enzymes XRCC1 and hOGG1. , 2003, Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology.

[19]  C. Ulrich,et al.  Polymorphisms in DNA repair genes and associations with cancer risk. , 2002, Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology.

[20]  J. Cleaver,et al.  UV damage, DNA repair and skin carcinogenesis. , 2002, Frontiers in bioscience : a journal and virtual library.

[21]  Oliver Fleck,et al.  DNA mismatch repair and mutation avoidance pathways , 2002, Journal of cellular physiology.

[22]  David M. Wilson,et al.  Molecular interactions of human Exo1 with DNA. , 2002, Nucleic acids research.

[23]  W. Tan,et al.  Ser326Cys polymorphism in hOGG1 gene and risk of esophageal cancer in a Chinese population , 2001, International journal of cancer.

[24]  Jack A. Taylor,et al.  DNA repair gene XRCC1 polymorphisms, smoking, and bladder cancer risk. , 2001, Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology.

[25]  J. Kaprio,et al.  Environmental and heritable factors in the causation of cancer--analyses of cohorts of twins from Sweden, Denmark, and Finland. , 2000, The New England journal of medicine.

[26]  R. Fishel,et al.  Human exonuclease I interacts with the mismatch repair protein hMSH2. , 1998, Cancer research.

[27]  J. Lamerdin,et al.  Hex1: a new human Rad2 nuclease family member with homology to yeast exonuclease 1. , 1998, Nucleic acids research.

[28]  N. Laird,et al.  Meta-analysis in clinical trials. , 1986, Controlled clinical trials.

[29]  W. Haenszel,et al.  Statistical aspects of the analysis of data from retrospective studies of disease. , 1959, Journal of the National Cancer Institute.

[30]  W. G. Cochran The combination of estimates from different experiments. , 1954 .

[31]  Li Li,et al.  XRCC1 R399Q polymorphism and risk of normal tissue injury after radiotherapy in breast cancer patients , 2013, Tumor Biology.

[32]  W. Cullen,et al.  Research confuses me: what is the difference between case-control and cohort studies in quantitative research? , 2013, Irish medical journal.

[33]  A. Jemal,et al.  Cancer statistics, 2012 , 2012, CA: a cancer journal for clinicians.

[34]  C. Mathers Global Burden of Disease , 2008 .

[35]  P. Modrich,et al.  Mismatch repair in replication fidelity, genetic recombination, and cancer biology. , 1996, Annual review of biochemistry.

[36]  N. Dubrawsky Cancer statistics , 1989, CA: a cancer journal for clinicians.