Protein Secondary Structure Prediction with Bidirectional Recurrent Neural Nets: Can Weight Updating for Each Residue Enhance Performance?
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Vasilis J. Promponas | Chris Christodoulou | Michalis Agathocleous | Antonis Antoniou | Vassilis Vassiliades | Georgia Christodoulou | Vassilis Vassiliades | A. Antoniou | V. Promponas | C. Christodoulou | M. Agathocleous | Georgia Christodoulou
[1] Narendra S. Chaudhari,et al. Cascaded Bidirectional Recurrent Neural Networks for Protein Secondary Structure Prediction , 2007, IEEE ACM Trans. Comput. Biol. Bioinform..
[2] Volker A. Eyrich,et al. EVA: Large‐scale analysis of secondary structure prediction , 2001, Proteins.
[3] Pierre Baldi,et al. Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profiles , 2002, Proteins.
[4] Geoffrey E. Hinton,et al. Learning representations by back-propagation errors, nature , 1986 .
[5] U. Hobohm,et al. Selection of representative protein data sets , 1992, Protein science : a publication of the Protein Society.
[6] G J Barton,et al. Evaluation and improvement of multiple sequence methods for protein secondary structure prediction , 1999, Proteins.
[7] T. Sejnowski,et al. Predicting the secondary structure of globular proteins using neural network models. , 1988, Journal of molecular biology.
[8] W. Kabsch,et al. Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features , 1983, Biopolymers.
[9] Jeffrey L. Elman,et al. Finding Structure in Time , 1990, Cogn. Sci..
[10] Geoffrey E. Hinton,et al. Learning representations by back-propagating errors , 1986, Nature.
[11] A. Yonath,et al. From peptide‐bond formation to cotranslational folding: dynamic, regulatory and evolutionary aspects , 2005, FEBS letters.
[12] Giovanni Soda,et al. Exploiting the past and the future in protein secondary structure prediction , 1999, Bioinform..
[13] F. Richards,et al. Identification of structural motifs from protein coordinate data: Secondary structure and first‐level supersecondary structure * , 1988, Proteins.
[14] B. Rost,et al. Improved prediction of protein secondary structure by use of sequence profiles and neural networks. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[15] C. Sander,et al. The HSSP database of protein structure-sequence alignments. , 1994, Nucleic acids research.
[16] A A Salamov,et al. Protein secondary structure prediction using local alignments. , 1997, Journal of molecular biology.
[17] B. Rost,et al. A modified definition of Sov, a segment‐based measure for protein secondary structure prediction assessment , 1999, Proteins.
[18] B. Rost,et al. Combining evolutionary information and neural networks to predict protein secondary structure , 1994, Proteins.
[19] C. Anfinsen. Principles that govern the folding of protein chains. , 1973, Science.