Imaging methods for elemental, chemical, molecular, and morphological analyses of single cells

Combining elemental, chemical, molecular, and morphological imaging information from individual cells with a lateral resolution well below 1 × 1 μm2 is the current technological challenge for investigating the smallest dimensions of living systems. In the race for such analytical performance, several techniques have been successfully developed; some use probes to determine given cellular contents whereas others use possible interactions between cellular matter with light or elements for characterization of contents. Morphological techniques providing information about cell dimensions have, when combined with other techniques, also opened the way to quantitative studies. New analytical opportunities are now being considered in cell biology, combining top-performance imaging techniques, applied to the same biosystem, with microscopy (nm–μm range) techniques providing elemental (micro-X-ray fluorescence, particle-induced X-ray emission, secondary-ion mass spectrometry), chemical (Raman, coherent anti-stokes Raman, Fourier-transform infrared, and near-field), molecular (UV–visible confocal and multiphoton), and morphological (AFM, ellipsometry, X-ray phase contrast, digital holography) information. Dedicated cell-culture methods have been proposed for multimodal imaging in vitro and/or ex vivo. This review shows that in addition to UV–fluorescent techniques, the imaging modalities able to provide interesting information about a cell, with high spatial and time resolution, have grown sufficiently to envisage quantitative analysis of chemical species inside subcellular compartments.

[1]  S. Kazarian,et al.  Applications of ATR-FTIR spectroscopic imaging to biomedical samples. , 2006, Biochimica et biophysica acta.

[2]  Ann-Shyn Chiang,et al.  A Map of Olfactory Representation in the Drosophila Mushroom Body , 2007, Cell.

[3]  H. Mattoussi,et al.  Use of quantum dots for live cell imaging , 2004, Nature Methods.

[4]  Pierre Marquet,et al.  DHM (Digital Holography Microscope) for imaging cells , 2007 .

[5]  Zuoshang Xu,et al.  ALS-associated mutant SOD1G93A causes mitochondrial vacuolation by expansion of the intermembrane space and by involvement of SOD1 aggregation and peroxisomes , 2003, BMC Neuroscience.

[6]  R. Newman,et al.  The structure and function of fluorescent proteins. , 2009, Chemical Society reviews.

[7]  E. Cuche,et al.  Measurement of the integral refractive index and dynamic cell morphometry of living cells with digital holographic microscopy. , 2005, Optics express.

[8]  D. Klenerman,et al.  Nanoscale live-cell imaging using hopping probe ion conductance microscopy , 2009, Nature Methods.

[9]  S. Hell,et al.  Nanoscale resolution in GFP-based microscopy , 2006, Nature Methods.

[10]  Barry Lai,et al.  Elemental and Redox Analysis of Single Bacterial Cells by X-ray Microbeam Analysis , 2004, Science.

[11]  Cyril Petibois,et al.  Chemical mapping of tumor progression by FT-IR imaging: towards molecular histopathology. , 2006, Trends in biotechnology.

[12]  W. Denk,et al.  Deep tissue two-photon microscopy , 2005, Nature Methods.

[13]  B. Lai,et al.  Imaging of the intracellular topography of copper with a fluorescent sensor and by synchrotron x-ray fluorescence microscopy. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[14]  M. Fordham,et al.  An evaluation of confocal versus conventional imaging of biological structures by fluorescence light microscopy , 1987, The Journal of cell biology.

[15]  Ji-Xin Cheng,et al.  Ex vivo and in vivo imaging of myelin fibers in mouse brain by coherent anti-Stokes Raman scattering microscopy. , 2008, Optics express.

[16]  S. Chandra 3D subcellular SIMS imaging in cryogenically prepared single cells , 2004 .

[17]  J. Je,et al.  Ex vivo imaging of basal cell carcinoma using synchrotron phase‐contrast X‐ray microscopy , 2007, Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging.

[18]  Heinrich F. Arlinghaus,et al.  Mass spectrometric characterization of elements and molecules in cell cultures and tissues , 2006 .

[19]  Victoria J Allan,et al.  Light Microscopy Techniques for Live Cell Imaging , 2003, Science.

[20]  M E Phelps,et al.  Positron emission tomography provides molecular imaging of biological processes. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[21]  Daniel A. Fletcher,et al.  Combined atomic force microscopy and side-view optical imaging for mechanical studies of cells , 2009, Nature Methods.

[22]  M. Malmsten,et al.  A Model Substrate for Ellipsometry Studies of Lipoprotein Deposition at the Endothelium. , 2001, Journal of colloid and interface science.

[23]  Rostislav V. Lapshin Feature-oriented scanning methodology for probe microscopy and nanotechnology , 2004 .

[24]  D. Prasher,et al.  Using GFP to see the light. , 1995, Trends in genetics : TIG.

[25]  A. Marcelli,et al.  Facing the challenge of biosample imaging by FTIR with a synchrotron radiation source , 2010, 35th International Conference on Infrared, Millimeter, and Terahertz Waves.

[26]  C. Fahrni,et al.  Biological applications of X-ray fluorescence microscopy: exploring the subcellular topography and speciation of transition metals. , 2007, Current opinion in chemical biology.

[27]  Jörg Maser,et al.  X‐ray fluorescence microprobe imaging in biology and medicine , 2006, Journal of cellular biochemistry.

[28]  Roger Y. Tsien,et al.  Improved green fluorescence , 1995, Nature.

[29]  Mortazavi,et al.  Supporting Online Material Materials and Methods Figs. S1 to S13 Tables S1 to S3 References Label-free Biomedical Imaging with High Sensitivity by Stimulated Raman Scattering Microscopy , 2022 .

[30]  Christian Depeursinge,et al.  Total aberrations compensation in digital holographic microscopy with a reference conjugated hologram. , 2006, Optics express.

[31]  S. Kazarian,et al.  Chemical Imaging of Live Cancer Cells in the Natural Aqueous Environment , 2009, Applied spectroscopy.

[32]  P. Cloetens,et al.  Synchrotron-based X-ray fluorescence imaging of human cells labeled with CdSe quantum dots. , 2009, Analytical biochemistry.

[33]  E. Betzig,et al.  Near-Field Optics: Microscopy, Spectroscopy, and Surface Modification Beyond the Diffraction Limit , 1992, Science.

[34]  Diane J. Rodi,et al.  X-ray fluorescence microscopy reveals large-scale relocalization and extracellular translocation of cellular copper during angiogenesis , 2007, Proceedings of the National Academy of Sciences.

[35]  Jasbinder S. Sanghera,et al.  Spectroscopic infrared scanning near-field optical microscopy (IR-SNOM) , 2005 .

[36]  C. Petibois,et al.  Bioimaging of cells and tissues using accelerator-based sources , 2008, Analytical and bioanalytical chemistry.

[37]  Cyril Petibois,et al.  A bright future for synchrotron imaging , 2009 .

[38]  J. Thrall,et al.  Clinical molecular imaging. , 2004, Journal of the American College of Radiology : JACR.

[39]  E. Cocker,et al.  Fiber-optic fluorescence imaging , 2005, Nature Methods.

[40]  Reto Meuli,et al.  Synchrotron radiation in radiology: radiology techniques based on synchrotron sources , 2004, European Radiology.

[41]  Daniel M. Mittleman,et al.  Metal wires for terahertz wave guiding , 2004, Nature.

[42]  S. Hell Far-Field Optical Nanoscopy , 2007, Science.

[43]  Taeyoon Son,et al.  Fluorescent image analysis for evaluating the condition of facial sebaceous follicles , 2008, Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging.