Adaptation of the pore diffusion model to describe multi-addition batch uptake high-throughput screening experiments.

Equilibrium isotherm and kinetic mass transfer measurements are critical to mechanistic modeling of binding and elution behavior within a chromatographic column. However, traditional methods of measuring these parameters are impractically time- and labor-intensive. While advances in high-throughput robotic liquid handling systems have created time and labor-saving methods of performing kinetic and equilibrium measurements of proteins on chromatographic resins in a 96-well plate format, these techniques continue to be limited by physical constraints on protein addition, incubation and separation times; the available concentration of protein stocks and process pools; and practical constraints on resin and fluid volumes in the 96-well format. In this study, a novel technique for measuring protein uptake kinetics (multi-addition batch uptake) has been developed to address some of these limitations during high-throughput batch uptake kinetic measurements. This technique uses sequential additions of protein stock to chromatographic resin in a 96-well plate and the subsequent removal of each addition by centrifugation or vacuum separation. The pore diffusion model was adapted here to model multi-addition batch uptake and was tested and compared with traditional batch uptake measurements of uptake of an Fc-fusion protein on an anion exchange resin. Acceptable agreement between the two techniques is achieved for the two solution conditions investigated here. In addition, a sensitivity analysis of the model to the physical inputs is presented and the advantages and limitations of the multi-addition batch uptake technique are explored.

[1]  G. Carta,et al.  Protein adsorption on novel acrylamido-based polymeric ion exchangers. II. Adsorption rates and column behavior. , 2000, Journal of chromatography. A.

[2]  Karol M Łącki,et al.  High-throughput process development of chromatography steps: advantages and limitations of different formats used. , 2012, Biotechnology journal.

[3]  J. Persson,et al.  Effects of resin ligand density on yield and impurity clearance in preparative cation exchange chromatography. II. Process characterization. , 2012, Journal of chromatography. A.

[4]  Jürgen Hubbuch,et al.  High‐throughput methods for miniaturization and automation of monoclonal antibody purification processes , 2012, Biotechnology progress.

[5]  Richard Tran,et al.  Changing manufacturing paradigms in downstream processing and the role of alternative bioseparation technologies , 2014 .

[6]  Jürgen Hubbuch,et al.  High Throughput Screening for the Design and Optimization of Chromatographic Processes - Miniaturization, Automation and Parallelization of Breakthrough and Elution Studies , 2008 .

[7]  Beckley K. Nfor,et al.  High-throughput isotherm determination and thermodynamic modeling of protein adsorption on mixed mode adsorbents. , 2010, Journal of chromatography. A.

[8]  Giorgio Carta,et al.  Protein Mass Transfer Kinetics in Ion Exchange Media: Measurements and Interpretations , 2005 .

[9]  A. Rathore,et al.  Chromatography process development in the quality by design paradigm I: Establishing a high‐throughput process development platform as a tool for estimating “characterization space” for an ion exchange chromatography step , 2013, Biotechnology progress.

[10]  Kaushal Rege,et al.  High‐throughput process development for recombinant protein purification , 2006, Biotechnology and bioengineering.

[11]  Kaushal Kumar,et al.  High-throughput process development for biopharmaceutical drug substances. , 2011, Trends in biotechnology.

[12]  R. Bayer,et al.  Recovery and purification process development for monoclonal antibody production , 2010, mAbs.

[13]  Sunil Chhatre,et al.  Review: Microscale methods for high‐throughput chromatography development in the pharmaceutical industry , 2009 .

[14]  A. Lenhoff Multiscale modeling of protein uptake patterns in chromatographic particles. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[15]  A. Lenhoff,et al.  Protein adsorption and transport in dextran-modified ion-exchange media. I: adsorption. , 2009, Journal of chromatography. A.

[16]  Kaushal Rege,et al.  High-throughput screening and quantitative structure-efficacy relationship models of potential displacer molecules for ion-exchange systems. , 2002, Biotechnology and bioengineering.

[17]  P. Ng,et al.  Purification of β-lactoglobulin with a high-capacity anion exchanger: high-throughput process development and scale-up considerations. , 2013, Journal of the science of food and agriculture.

[18]  G. Carta,et al.  Adsorption of deamidated antibody variants on macroporous and dextran-grafted cation exchangers: I. Adsorption equilibrium. , 2011, Journal of chromatography. A.

[19]  Abraham M Lenhoff,et al.  Pore size distributions of ion exchangers and relation to protein binding capacity. , 2006, Journal of chromatography. A.

[20]  Howard A. Chase,et al.  Modelling single-component protein adsorption to the cation exchanger s sepharose® FF , 1990 .

[21]  Gregory A Barker,et al.  Adaptation to high throughput batch chromatography enhances multivariate screening. , 2015, Biotechnology journal.

[22]  Yu Isakari,et al.  High‐throughput process development methods for chromatography and precipitation of proteins: Advantages and precautions , 2013 .

[23]  V. Richter,et al.  Cation exchange displacement batch chromatography of proteins guided by screening of protein purification parameters. , 2012, Journal of separation science.

[24]  Jürgen Hubbuch,et al.  High Throughput Screening of Chromatographic Phases for Rapid Process Development , 2005 .

[25]  Kun Yang,et al.  Structured parallel diffusion model for intraparticle mass transport of proteins to porous adsorbent , 2007 .

[26]  A. Lenhoff,et al.  Effects of ionic strength on lysozyme uptake rates in cation exchangers. I: Uptake in SP Sepharose FF. , 2005, Biotechnology and bioengineering.

[27]  G. Carta,et al.  Adsorption kinetics of deamidated antibody variants on macroporous and dextran-grafted cation exchangers. III. Microscopic studies. , 2011, Journal of chromatography. A.

[28]  Jun-fen Ma,et al.  Development of a high throughput protein a well‐plate purification method for monoclonal antibodies , 2009, Biotechnology progress.

[29]  Motonobu Yoshikawa,et al.  Parallel transport of BSA by surface and pore diffusion in strongly basic chitosan , 1994 .

[30]  H. Yoshida,et al.  Parallel transport by solid-phase and macropore diffusion in a polyaminated highly porous chitosan bead in case of acetic acid and lactic acid , 2001 .

[31]  Jürgen Hubbuch,et al.  High Throughput Screening for the Design and Optimization of Chromatographic Processes: Automated Optimization of Chromatographic Phase Systems , 2009 .

[32]  N. Sanaie,et al.  Applying high-throughput methods to develop a purification process for a highly glycosylated protein. , 2012, Biotechnology journal.

[33]  Tryggve Bergander,et al.  High‐Throughput Process Development: Determination of Dynamic Binding Capacity Using Microtiter Filter Plates Filled with Chromatography Resin , 2008, Biotechnology progress.

[34]  A. Lenhoff,et al.  Nondiffusive mechanisms enhance protein uptake rates in ion exchange particles , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[35]  Gerhard Schembecker,et al.  A Fully Automated Ad- and Desorption Method for Resin and Solvent Screening , 2013 .

[36]  A. Lenhoff,et al.  A predictive approach to correlating protein adsorption isotherms on ion-exchange media. , 2008, The journal of physical chemistry. B.

[37]  Beckley K. Nfor,et al.  Model‐based rational strategy for chromatographic resin selection , 2011, Biotechnology progress.

[38]  Abraham M Lenhoff,et al.  Protein adsorption and transport in dextran-modified ion-exchange media. II. Intraparticle uptake and column breakthrough. , 2011, Journal of chromatography. A.

[39]  A. Lenhoff,et al.  Comparison of protein adsorption isotherms and uptake rates in preparative cation-exchange materials. , 1998, Journal of chromatography. A.

[40]  B. Kelley,et al.  High-throughput screening of chromatographic separations: I. Method development and column modeling. , 2008, Biotechnology and bioengineering.

[41]  John P Welsh,et al.  A practical strategy for using miniature chromatography columns in a standardized high‐throughput workflow for purification development of monoclonal antibodies , 2014, Biotechnology progress.

[42]  Marcel Ottens,et al.  Purifying biopharmaceuticals: knowledge-based chromatographic process development. , 2014, Trends in biotechnology.