A molecular inversion probe assay for detecting alternative splicing

[1]  Eric T. Wang,et al.  Alternative Isoform Regulation in Human Tissue Transcriptomes , 2008, Nature.

[2]  Marcel H. Schulz,et al.  A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome , 2008, Science.

[3]  Malek Faham,et al.  A comprehensive assay for targeted multiplex amplification of human DNA sequences , 2008, Proceedings of the National Academy of Sciences.

[4]  Mark D. Robinson,et al.  FIRMA: a method for detection of alternative splicing from exon array data , 2008, Bioinform..

[5]  M. Gerstein,et al.  The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing , 2008, Science.

[6]  David Haussler,et al.  The UCSC Genome Browser Database: 2008 update , 2007, Nucleic Acids Res..

[7]  James Ireland,et al.  Analysis of molecular inversion probe performance for allele copy number determination , 2007, Genome Biology.

[8]  Tatiana Tatusova,et al.  NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins , 2004, Nucleic Acids Res..

[9]  Tyson A. Clark,et al.  Discovery of tissue-specific exons using comprehensive human exon microarrays , 2007, Genome Biology.

[10]  Hanlee P. Ji,et al.  Molecular inversion probe analysis of gene copy alterations reveals distinct categories of colorectal carcinoma. , 2006, Cancer research.

[11]  Corey Nislow,et al.  A unique and universal molecular barcode array , 2006, Nature Methods.

[12]  David Haussler,et al.  Unusual Intron Conservation near Tissue-Regulated Exons Found by Splicing Microarrays , 2005, PLoS Comput. Biol..

[13]  Yael Mandel-Gutfreund,et al.  Detection and measurement of alternative splicing using splicing-sensitive microarrays. , 2005, Methods.

[14]  Ronald W. Davis,et al.  Allele quantification using molecular inversion probes (MIP) , 2005, Nucleic acids research.

[15]  Fuli Yu,et al.  Highly multiplexed molecular inversion probe genotyping: over 10,000 targeted SNPs genotyped in a single tube assay. , 2005, Genome research.

[16]  Xiang-Dong Fu,et al.  ASF/SF2-Regulated CaMKIIδ Alternative Splicing Temporally Reprograms Excitation-Contraction Coupling in Cardiac Muscle , 2005, Cell.

[17]  Xiang Xu,et al.  Identification and Functional Characterization of a Novel Human Misshapen/Nck Interacting Kinase-related Kinase, hMINKβ* , 2004, Journal of Biological Chemistry.

[18]  Jennifer A Byrne,et al.  The tumor protein D52 family: many pieces, many puzzles. , 2004, Biochemical and biophysical research communications.

[19]  G. Church,et al.  Accurate multiplex gene synthesis from programmable DNA microchips , 2004, Nature.

[20]  J. Venables.  Aberrant and Alternative Splicing in Cancer , 2004, Cancer Research.

[21]  E. Lander,et al.  Finishing the euchromatic sequence of the human genome , 2004 .

[22]  J. Bonfield,et al.  Finishing the euchromatic sequence of the human genome , 2004, Nature.

[23]  Jian-Bing Fan,et al.  A versatile assay for high-throughput gene expression profiling on universal array matrices. , 2004, Genome research.

[24]  S. Perry.  Vertebrate tropomyosin: distribution, properties and function , 2004, Journal of Muscle Research & Cell Motility.

[25]  International Human Genome Sequencing Consortium.  Finishing the euchromatic sequence of the human genome , 2004 .

[26]  Xiang Xu,et al.  Identification and functional characterization of a novel human misshapen/Nck interacting kinase-related kinase, hMINK beta. , 2004, The Journal of biological chemistry.

[27]  J. Castle,et al.  Genome-Wide Survey of Human Alternative Pre-mRNA Splicing with Exon Junction Microarrays , 2003, Science.

[28]  Valerie Combaret,et al.  Real-time PCR based on SYBR-Green I fluorescence: An alternative to the TaqMan assay for a relative quantification of gene rearrangements, gene amplifications and micro gene deletions , 2003, BMC biotechnology.

[29]  S. H. Wilson,et al.  Alternative splicing as a mechanism for regulating 14-3-3 binding: interactions between hD53 (TPD52L1) and 14-3-3 proteins. , 2003, Journal of molecular biology.

[30]  Ronald W. Davis,et al.  Multiplexed genotyping with sequence-tagged molecular inversion probes , 2003, Nature Biotechnology.

[31]  D. Black,et al.  Alternative RNA splicing in the nervous system , 2001, Progress in Neurobiology.

[32]  C. Bortner,et al.  Modification of Alternative Splicing of Bcl-x Pre-mRNA in Prostate and Breast Cancer Cells , 2001, The Journal of Biological Chemistry.

[33]  P. Stenson,et al.  Human Gene Mutation Database—A biomedical information and research resource , 2000, Human mutation.

[34]  S Rozen,et al.  Primer3 on the WWW for general users and for biologist programmers. , 2000, Methods in molecular biology.

[35]  Thomas L. Madden,et al.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.

[36]  R. Abramson,et al.  Detection of specific polymerase chain reaction product by utilizing the 5'----3' exonuclease activity of Thermus aquaticus DNA polymerase. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[37]  M. Braga,et al.  Exploratory Data Analysis , 2018, Encyclopedia of Social Network Analysis and Mining. 2nd Ed..