Faster exact computation of rSPR distance

[1]  Zhi-Zhong Chen,et al.  An Ultrafast Tool for Minimum Reticulate Networks , 2013, J. Comput. Biol..

[2]  Zhi-Zhong Chen,et al.  A fast tool for minimum hybridization networks , 2012, BMC Bioinformatics.

[3]  Bin Ma,et al.  Efficient estimation of the accuracy of the maximum likelihood method for ancestral state reconstruction , 2011, J. Comb. Optim..

[4]  Norbert Zeh,et al.  Fast FPT Algorithms for Computing Rooted Agreement Forests: Theory and Experiments , 2010, SEA.

[5]  Robert Fredriksson,et al.  SPRIT: Identifying horizontal gene transfer in rooted phylogenetic trees , 2010, BMC Evolutionary Biology.

[6]  Norbert Zeh,et al.  A Unifying View on Approximation and FPT of Agreement Forests , 2009, WABI.

[7]  Yufeng Wu,et al.  A practical method for exact computation of subtree prune and regraft distance , 2009, Bioinform..

[8]  Charles Semple,et al.  A 3-approximation algorithm for the subtree distance between phylogenies , 2008, J. Discrete Algorithms.

[9]  Pablo A. Goloboff,et al.  Calculating SPR distances between trees , 2008, Cladistics : the international journal of the Willi Hennig Society.

[10]  Luay Nakhleh,et al.  PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships , 2008, BMC Bioinformatics.

[11]  Yoshiko Wakabayashi,et al.  The maximum agreement forest problem: Approximation algorithms and computational experiments , 2007, Theor. Comput. Sci..

[12]  Maria Luisa Bonet,et al.  Approximating Subtree Distances Between Phylogenies , 2006, J. Comput. Biol..

[13]  Nicholas Hamilton,et al.  Phylogenetic identification of lateral genetic transfer events , 2006, BMC Evolutionary Biology.

[14]  Charles Semple,et al.  On the Computational Complexity of the Rooted Subtree Prune and Regraft Distance , 2005 .

[15]  Eric Bapteste,et al.  Deduction of probable events of lateral gene transfer through comparison of phylogenetic trees by recursive consolidation and rearrangement , 2005, BMC Evolutionary Biology.

[16]  Jerrold I. Davis,et al.  Phylogeny and subfamilial classification of the grasses (Poaceae) , 2001 .

[17]  Andrzej Lingas,et al.  On the Complexity of Constructing Evolutionary Trees , 1999, J. Comb. Optim..

[18]  Bin Ma,et al.  Fitting Distances by Tree Metrics with Increment Error , 1999, J. Comb. Optim..

[19]  Tao Jiang,et al.  On the Complexity of Comparing Evolutionary Trees , 1996, Discret. Appl. Math..