Alzheimer's Disease Diagnosis Using Landmark-Based Features From Longitudinal Structural MR Images

Structural magnetic resonance imaging (MRI) has been proven to be an effective tool for Alzheimer's disease (AD) diagnosis. While conventional MRI-based AD diagnosis typically uses images acquired at a single time point, a longitudinal study is more sensitive in detecting early pathological changes of AD, making it more favorable for accurate diagnosis. In general, there are two challenges faced in MRI-based diagnosis. First, extracting features from structural MR images requires time-consuming nonlinear registration and tissue segmentation, whereas the longitudinal study with involvement of more scans further exacerbates the computational costs. Moreover, the inconsistent longitudinal scans (i.e., different scanning time points and also the total number of scans) hinder extraction of unified feature representations in longitudinal studies. In this paper, we propose a landmark-based feature extraction method for AD diagnosis using longitudinal structural MR images, which does not require nonlinear registration or tissue segmentation in the application stage and is also robust to inconsistencies among longitudinal scans. Specifically, first, the discriminative landmarks are automatically discovered from the whole brain using training images, and then efficiently localized using a fast landmark detection method for testing images, without the involvement of any nonlinear registration and tissue segmentation; and second, high-level statistical spatial features and contextual longitudinal features are further extracted based on those detected landmarks, which can characterize spatial structural abnormalities and longitudinal landmark variations. Using these spatial and longitudinal features, a linear support vector machine is finally adopted to distinguish AD subjects or mild cognitive impairment (MCI) subjects from healthy controls (HCs). Experimental results on the Alzheimer's Disease Neuroimaging Initiative database demonstrate the superior performance and efficiency of the proposed method, with classification accuracies of 88.30% for AD versus HC and 79.02% for MCI versus HC, respectively.

[1]  Dinggang Shen,et al.  View‐aligned hypergraph learning for Alzheimer's disease diagnosis with incomplete multi‐modality data , 2017, Medical Image Anal..

[2]  Peter J Gianaros,et al.  Longitudinal assessment of neuroimaging and clinical markers in autosomal dominant Alzheimer's disease: a prospective cohort study , 2015, The Lancet Neurology.

[3]  Fred L. Bookstein,et al.  Principal Warps: Thin-Plate Splines and the Decomposition of Deformations , 1989, IEEE Trans. Pattern Anal. Mach. Intell..

[4]  Yaozong Gao,et al.  Robust Anatomical Landmark Detection for MR Brain Image Registration , 2014, MICCAI.

[5]  Chong-Wah Ngo,et al.  Evaluating bag-of-visual-words representations in scene classification , 2007, MIR '07.

[6]  M. Prince,et al.  World Alzheimer Report 2015 - The Global Impact of Dementia: An analysis of prevalence, incidence, cost and trends , 2015 .

[7]  Arun Ross,et al.  Score normalization in multimodal biometric systems , 2005, Pattern Recognit..

[8]  Yaozong Gao,et al.  Automatic Craniomaxillofacial Landmark Digitization via Segmentation-Guided Partially-Joint Regression Forest Model and Multiscale Statistical Features , 2016, IEEE Transactions on Biomedical Engineering.

[9]  Olivier Piguet,et al.  Disease-specific patterns of cortical and subcortical degeneration in a longitudinal study of Alzheimer's disease and behavioural-variant frontotemporal dementia , 2017, NeuroImage.

[10]  J. Pariente,et al.  Early diagnosis of Alzheimer's disease using cortical thickness: impact of cognitive reserve , 2009, Brain : a journal of neurology.

[11]  Dinggang Shen,et al.  HAMMER: hierarchical attribute matching mechanism for elastic registration , 2002, IEEE Transactions on Medical Imaging.

[12]  Marie Chupin,et al.  Multidimensional classification of hippocampal shape features discriminates Alzheimer's disease and mild cognitive impairment from normal aging , 2009, NeuroImage.

[13]  H. Benali,et al.  Support vector machine-based classification of Alzheimer’s disease from whole-brain anatomical MRI , 2009, Neuroradiology.

[14]  刘明霞 View-centralized multi-atlas classification for Alzheimer's disease diagnosis , 2015 .

[15]  Fabio A. González,et al.  Extracting Salient Brain Patterns for Imaging-Based Classification of Neurodegenerative Diseases , 2014, IEEE Transactions on Medical Imaging.

[16]  Magda Tsolaki,et al.  Application of a MRI based index to longitudinal atrophy change in Alzheimer disease, mild cognitive impairment and healthy older individuals in the AddNeuroMed cohort , 2014, Front. Aging Neurosci..

[17]  MalikJitendra,et al.  Representing and Recognizing the Visual Appearance of Materials using Three-dimensional Textons , 2001 .

[18]  C. Jack,et al.  Comparison of different MRI brain atrophy rate measures with clinical disease progression in AD , 2004, Neurology.

[19]  Timothy F. Cootes,et al.  Fully Automatic Segmentation of the Proximal Femur Using Random Forest Regression Voting , 2013, IEEE Transactions on Medical Imaging.

[20]  K. Mardia Assessment of multinormality and the robustness of Hotelling's T^2 test , 1975 .

[21]  J. A. Hartigan,et al.  A k-means clustering algorithm , 1979 .

[22]  C. Jack,et al.  Tracking pathophysiological processes in Alzheimer's disease: an updated hypothetical model of dynamic biomarkers , 2013, The Lancet Neurology.

[23]  Manuel Graña,et al.  Eigenanatomy on Fractional Anisotropy Imaging Provides White Matter Anatomical Features Discriminating Between Alzheimer's Disease and Late Onset Bipolar Disorder. , 2016, Current Alzheimer research.

[24]  Nick C Fox,et al.  The clinical use of structural MRI in Alzheimer disease , 2010, Nature Reviews Neurology.

[25]  Manuel Graña,et al.  Discrimination between Alzheimer's Disease and Late Onset Bipolar Disorder Using Multivariate Analysis. , 2015 .

[26]  Dinggang Shen,et al.  Affine-invariant image retrieval by correspondence matching of shapes , 1999, Image Vis. Comput..

[27]  Alan C. Evans,et al.  Enhancement of MR Images Using Registration for Signal Averaging , 1998, Journal of Computer Assisted Tomography.

[28]  Bill Triggs,et al.  Histograms of oriented gradients for human detection , 2005, 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'05).

[29]  Jitendra Malik,et al.  Representing and Recognizing the Visual Appearance of Materials using Three-dimensional Textons , 2001, International Journal of Computer Vision.

[30]  Jun Zhang,et al.  Local Energy Pattern for Texture Classification Using Self-Adaptive Quantization Thresholds , 2013, IEEE Transactions on Image Processing.

[31]  I. Campbell-Taylor Contribution of Alzheimer disease to mortality in the United States , 2014, Neurology.

[32]  Manuel Graña,et al.  Discrimination of Schizophrenia Auditory Hallucinators by Machine Learning of Resting-State Functional MRI , 2015, Int. J. Neural Syst..

[33]  Shoab Ahmad Khan,et al.  A Nonparametric Approach for Mild Cognitive Impairment to AD Conversion Prediction: Results on Longitudinal Data , 2017, IEEE Journal of Biomedical and Health Informatics.

[34]  Jitendra Malik,et al.  Normalized cuts and image segmentation , 1997, Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition.

[35]  Guoyan Zheng,et al.  Automatic X-ray landmark detection and shape segmentation via data-driven joint estimation of image displacements , 2014, Medical Image Anal..

[36]  Antonio Criminisi,et al.  Regression forests for efficient anatomy detection and localization in computed tomography scans , 2013, Medical Image Anal..

[37]  Chong-Wah Ngo,et al.  Towards optimal bag-of-features for object categorization and semantic video retrieval , 2007, CIVR '07.

[38]  Terry M. Peters,et al.  Medical Image Computing and Computer Assisted Intervention – MICCAI 2019: 22nd International Conference, Shenzhen, China, October 13–17, 2019, Proceedings, Part IV , 2019, MICCAI.

[39]  A. Wimo,et al.  The global prevalence of dementia: A systematic review and metaanalysis , 2013, Alzheimer's & Dementia.

[40]  Peter A. Bandettini,et al.  Does feature selection improve classification accuracy? Impact of sample size and feature selection on classification using anatomical magnetic resonance images , 2012, NeuroImage.

[41]  Dinggang Shen,et al.  Iterative multi-atlas-based multi-image segmentation with tree-based registration , 2012, NeuroImage.

[42]  Yaozong Gao,et al.  Detecting Anatomical Landmarks for Fast Alzheimer’s Disease Diagnosis , 2016, IEEE Transactions on Medical Imaging.

[43]  Rozi Mahmud,et al.  Boosting diagnosis accuracy of Alzheimer's disease using high dimensional recognition of longitudinal brain atrophy patterns , 2015, Behavioural Brain Research.

[44]  Vladimir Vapnik,et al.  Statistical learning theory , 1998 .

[45]  Jun Zhang,et al.  Continuous rotation invariant local descriptors for texton dictionary-based texture classification , 2013, Comput. Vis. Image Underst..

[46]  Frédéric Jurie,et al.  Sampling Strategies for Bag-of-Features Image Classification , 2006, ECCV.

[47]  Jianping Yin,et al.  Multiple Kernel Learning in the Primal for Multimodal Alzheimer’s Disease Classification , 2013, IEEE Journal of Biomedical and Health Informatics.

[48]  Ian T. Jolliffe,et al.  Principal Component Analysis , 2002, International Encyclopedia of Statistical Science.

[49]  Dinggang Shen,et al.  Simulating deformations of MR brain images for validation of atlas-based segmentation and registration algorithms , 2006, NeuroImage.

[50]  Claudia Lindner,et al.  Robust and Accurate Shape Model Matching Using Random Forest Regression-Voting. , 2015, IEEE transactions on pattern analysis and machine intelligence.

[51]  N. Tzourio-Mazoyer,et al.  Automated Anatomical Labeling of Activations in SPM Using a Macroscopic Anatomical Parcellation of the MNI MRI Single-Subject Brain , 2002, NeuroImage.

[52]  A. Simmons,et al.  Different multivariate techniques for automated classification of MRI data in Alzheimer’s disease and mild cognitive impairment , 2013, Psychiatry Research: Neuroimaging.

[53]  Sabina Sonia Tangaro,et al.  Integrating longitudinal information in hippocampal volume measurements for the early detection of Alzheimer's disease , 2016, NeuroImage.

[54]  Daoqiang Zhang,et al.  Joint Binary Classifier Learning for ECOC-Based Multi-Class Classification , 2016, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[55]  Yaozong Gao,et al.  Learning-Based Multimodal Image Registration for Prostate Cancer Radiation Therapy , 2016, MICCAI.

[56]  Nick C Fox,et al.  Automatic classification of MR scans in Alzheimer's disease. , 2008, Brain : a journal of neurology.