TranscriptomeBrowser: A Powerful and Flexible Toolbox to Explore Productively the Transcriptional Landscape of the Gene Expression Omnibus Database
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Samuel Granjeaud | Denis Puthier | Elisabeth Remy | Gilles Didier | Aurélie Bergon | Jean Imbert | Julien Textoris | S. Granjeaud | C. Nguyen | É. Remy | J. Imbert | G. Didier | D. Puthier | A. Bergon | Fabrice Lopez | Catherine Nguyen | J. Textoris | Fabrice Lopez
[1] Sean R. Collins,et al. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae , 2006, Nature.
[2] C. Ball,et al. Microarray databases: standards and ontologies , 2002, Nature Genetics.
[3] N. Hayward,et al. Confirmation of a BRAF mutation-associated gene expression signature in melanoma. , 2007, Pigment cell research.
[4] Ron Edgar,et al. Gene Expression Omnibus ( GEO ) : Microarray data storage , submission , retrieval , and analysis , 2008 .
[5] S. Valitutti,et al. CD160-activating NK cell effector functions depend on the phosphatidylinositol 3-kinase recruitment. , 2007, International immunology.
[6] J. Newell,et al. OBF-1, a novel B cell-specific coactivator that stimulates immunoglobulin promoter activity through association with octamer-binding proteins , 1995, Cell.
[7] D. Botstein,et al. Cluster analysis and display of genome-wide expression patterns. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[8] B. Korn,et al. Characterization of a Cluster of Human High/Ultrahigh Sulfur Keratin-associated Protein Genes Embedded in the Type I Keratin Gene Domain on Chromosome 17q12-21* , 2001, The Journal of Biological Chemistry.
[9] Stijn van Dongen,et al. GeneMCL in microarray analysis , 2005, Comput. Biol. Chem..
[10] Yudong D. He,et al. Gene expression profiling predicts clinical outcome of breast cancer , 2002, Nature.
[11] P. Farnham,et al. T-bet regulates the terminal maturation and homeostasis of NK and Valpha14i NKT cells. , 2004, Immunity.
[12] Laurie J. Heyer,et al. Exploring expression data: identification and analysis of coexpressed genes. , 1999, Genome research.
[13] L. Holmberg,et al. Gene expression profiling spares early breast cancer patients from adjuvant therapy: derived and validated in two population-based cohorts , 2005, Breast Cancer Research.
[14] Maqc Consortium. The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements , 2006, Nature Biotechnology.
[15] Patrik D'haeseleer,et al. How does gene expression clustering work? , 2005, Nature Biotechnology.
[16] J. Inazawa,et al. POU2AF1, an amplification target at 11q23, promotes growth of multiple myeloma cells by directly regulating expression of a B-cell maturation factor, TNFRSF17 , 2008, Oncogene.
[17] S. Dongen. A cluster algorithm for graphs , 2000 .
[18] Sergio Contrino,et al. ArrayExpress—a public repository for microarray gene expression data at the EBI , 2004, Nucleic Acids Res..
[19] Dennis B. Troup,et al. NCBI GEO: mining tens of millions of expression profiles—database and tools update , 2006, Nucleic Acids Res..
[20] Jean YH Yang,et al. Bioconductor: open software development for computational biology and bioinformatics , 2004, Genome Biology.
[21] David Liu,et al. DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis , 2007, BMC Bioinformatics.
[22] David Botstein,et al. SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data , 2003, Nucleic Acids Res..
[23] G Leclercq,et al. About GATA3, HNF3A, and XBP1, three genes co-expressed with the oestrogen receptor-α gene (ESR1) in breast cancer , 2004, Molecular and Cellular Endocrinology.
[24] Anton J. Enright,et al. An efficient algorithm for large-scale detection of protein families. , 2002, Nucleic acids research.
[25] J. Renauld,et al. Synergistic proliferation and activation of natural killer cells by interleukin 12 and interleukin 18. , 1999, Cytokine.
[26] M. Colonna,et al. Molecular characterization of a novel human natural killer cell receptor homologous to mouse 2B4. , 1999, Tissue antigens.