Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening

[1]  Marco Marra,et al.  Generation of ESTs in Vitis vinifera wine grape (Cabernet Sauvignon) and table grape (Muscat Hamburg) and discovery of new candidate genes with potential roles in berry development. , 2007, Gene.

[2]  N. Sharma,et al.  Identification and characterisation of acidic and novel basic forms of actinidin, the highly abundant cysteine protease from kiwifruit. , 2007, Functional plant biology : FPB.

[3]  J. Poulain,et al.  The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla , 2007, Nature.

[4]  Mindy Y. Wang,et al.  In vitro and in vivo release of aroma compounds from yellow-fleshed kiwifruit. , 2007, Journal of agricultural and food chemistry.

[5]  K. Asano,et al.  Molecular Interactions of a Soluble Gibberellin Receptor, GID1, with a Rice DELLA Protein, SLR1, and Gibberellin[W] , 2007, The Plant Cell Online.

[6]  Robert J. Schaffer,et al.  A Genomics Approach Reveals That Aroma Production in Apple Is Controlled by Ethylene Predominantly at the Final Step in Each Biosynthetic Pathway[W] , 2007, Plant Physiology.

[7]  J. Cooney,et al.  The missing step of the l-galactose pathway of ascorbate biosynthesis in plants, an l-galactose guanyltransferase, increases leaf ascorbate content , 2007, Proceedings of the National Academy of Sciences.

[8]  Kentaro Inoue,et al.  Identification of genes involved in proanthocyanidin biosynthesis of persimmon (Diospyros kaki) fruit , 2007 .

[9]  Hongwen Huang,et al.  Genetic Resources of Kiwifruit: Domestication and Breeding , 2007 .

[10]  Edward N Baker,et al.  High-resolution crystal structure of plant carboxylesterase AeCXE1, from Actinidia eriantha, and its complex with a high-affinity inhibitor paraoxon. , 2007, Biochemistry.

[11]  Robert D. Finn,et al.  New developments in the InterPro database , 2007, Nucleic Acids Res..

[12]  J. Cairney,et al.  A simple and efficient method for isolating RNA from pine trees , 1993, Plant Molecular Biology Reporter.

[13]  I. Nishiyama Fruits of the actinidia genus. , 2007, Advances in food and nutrition research.

[14]  A. Ferguson The need for characterisation and evaluation of germplasm: kiwifruit as an example , 2007, Euphytica.

[15]  D. Soltis,et al.  An expressed sequence tag (EST) library from developing fruits of an Hawaiian endemic mint (Stenogyne rugosa, Lamiaceae): characterization and microsatellite markers , 2006, BMC Plant Biology.

[16]  Steve L. Taylor,et al.  Evaluation of IgE binding to proteins of hardy (Actinidia arguta), gold (Actinidia chinensis) and green (Actinidia deliciosa) kiwifruits and processed hardy kiwifruit concentrate, using sera of individuals with food allergies to green kiwifruit. , 2006, Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association.

[17]  Sasha A. Singh,et al.  Structure of Arabidopsis dehydroquinate dehydratase-shikimate dehydrogenase and implications for metabolic channeling in the shikimate pathway. , 2006, Biochemistry.

[18]  S. Hörtensteiner Chlorophyll degradation during senescence. , 2006, Annual review of plant biology.

[19]  B. Pogson,et al.  Vitamin synthesis in plants: tocopherols and carotenoids. , 2006, Annual review of plant biology.

[20]  E. Grotewold The genetics and biochemistry of floral pigments. , 2006, Annual review of plant biology.

[21]  T. Ishikawa,et al.  Progress in manipulating ascorbic acid biosynthesis and accumulation in plants , 2006 .

[22]  D. DellaPenna,et al.  Defining the primary route for lutein synthesis in plants: the role of Arabidopsis carotenoid beta-ring hydroxylase CYP97A3. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[23]  R. Newcomb Running head: Analyses of Expressed Sequence Tags from Apple. , 2006 .

[24]  R. Atkinson,et al.  KIWIFRUIT CELL WALLS: TOWARDS AN UNDERSTANDING OF SOFTENING?* , 2006 .

[25]  F. Carrari,et al.  Conversion of MapMan to Allow the Analysis of Transcript Data from Solanaceous Species: Effects of Genetic and Environmental Alterations in Energy Metabolism in the Leaf , 2006, Plant Molecular Biology.

[26]  L. Fraser,et al.  Cross-species amplification of microsatellite loci within the dioecious, polyploid genus Actinidia (Actinidiaceae) , 2005, Theoretical and Applied Genetics.

[27]  A. Ferguson,et al.  Pigments in the fruit of red-fleshed kiwifruit (Actinidia chinensis and Actinidia deliciosa). , 2005, Journal of agricultural and food chemistry.

[28]  L. Camardella,et al.  Kiwellin, a Novel Protein from Kiwi Fruit. Purification, Biochemical Characterization and Identification as an Allergen* , 2005, The protein journal.

[29]  J. Todd,et al.  Effects of kiwifruit (Actinidia deliciosa) cysteine protease on growth and survival of Spodoptera litura larvae (Lepidoptera: Noctuidae) fed with control or transgenic avidin‐expressing tobacco , 2005 .

[30]  M. S. Grando,et al.  Comparative analysis of expressed sequence tags from different organs of Vitis vinifera L. , 2005, Functional & Integrative Genomics.

[31]  H. Sampson,et al.  Food allergy – accurately identifying clinical reactivity , 2005, Allergy.

[32]  Anne White,et al.  Evaluation of softening characteristics of fruit from 14 species of Actinidia , 2005 .

[33]  Y. Sheng,et al.  An active ingredient of Cat's Claw water extracts identification and efficacy of quinic acid. , 2005, Journal of ethnopharmacology.

[34]  T. Aoki,et al.  Molecular and Biochemical Characterization of 2-Hydroxyisoflavanone Dehydratase. Involvement of Carboxylesterase-Like Proteins in Leguminous Isoflavone Biosynthesis 1[w] , 2005 .

[35]  M. Crowe,et al.  Developing pineapple fruit has a small transcriptome dominated by metallothionein. , 2005, Journal of experimental botany.

[36]  M. P. Cummings PHYLIP (Phylogeny Inference Package) , 2004 .

[37]  Zhangjun Fei,et al.  Comprehensive EST analysis of tomato and comparative genomics of fruit ripening. , 2004, The Plant journal : for cell and molecular biology.

[38]  K. Grimshaw,et al.  Kiwi fruit is a significant allergen and is associated with differing patterns of reactivity in children and adults , 2004, Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology.

[39]  A. Ferguson,et al.  Inheritance of taste characters and fruit size and number in a diploid Actinidia chinensis (kiwifruit) population , 2004, Euphytica.

[40]  M. Sorrells,et al.  EST derived SSR markers for comparative mapping in wheat and rice , 2004, Molecular Genetics and Genomics.

[41]  Heimo Breiteneder,et al.  Thaumatin‐like proteins – a new family of pollen and fruit allergens , 2004, Allergy.

[42]  Kexuan Tang,et al.  Preference of simple sequence repeats in coding and non-coding regions of Arabidopsis thaliana , 2004, Bioinform..

[43]  K. B. Marsh,et al.  High growing temperatures reduce fruit carbohydrate and vitamin C in kiwifruit , 2004 .

[44]  S. Rhee,et al.  MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. , 2004, The Plant journal : for cell and molecular biology.

[45]  M. Sorrells,et al.  Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat , 2002, Plant Molecular Biology.

[46]  D. Brummell,et al.  Cell wall metabolism in fruit softening and quality and its manipulation in transgenic plants , 2001, Plant Molecular Biology.

[47]  S. Ledger,et al.  Cloning and characterization of five cDNAs for genes differentially expressed during fruit development of kiwifruit (Actinidia deliciosa var.deliciosa) , 1994, Plant Molecular Biology.

[48]  E. Macrae,et al.  Kiwifruit β-galactosidase: Isolation and activity against specific fruit cell-wall polysaccharides , 1993, Planta.

[49]  R. McKee,et al.  Molecular analysis of actinidin, the cysteine proteinase of Actinidia chinensis , 1988, Plant Molecular Biology.

[50]  L. Fraser,et al.  EST-derived microsatellites from Actinidia species and their potential for mapping , 2004, Theoretical and Applied Genetics.

[51]  P. Shewry,et al.  Plant Food Allergens , 2003 .

[52]  J. Lucas,et al.  Kiwi fruit allergy: A review , 2003, Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology.

[53]  Terry Speed,et al.  Normalization of cDNA microarray data. , 2003, Methods.

[54]  J. Putterill,et al.  The Carboxylesterase Gene Family from Arabidopsis thaliana , 2003, Journal of Molecular Evolution.

[55]  H. Young,et al.  Actinidia arguta: volatile compounds in fruit and flowers. , 2003, Phytochemistry.

[56]  S. Decroocq,et al.  Development and transferability of apricot and grape EST microsatellite markers across taxa , 2003, Theoretical and Applied Genetics.

[57]  R. Jung,et al.  Redundant Proteolytic Mechanisms Process Seed Storage Proteins in the Absence of Seed-Type Members of the Vacuolar Processing Enzyme Family of Cysteine Proteases , 2002, The Plant Cell Online.

[58]  S. Christensen,et al.  Hydrophilic carboxylic acids and iridoid glycosides in the juice of American and European cranberries (Vaccinium macrocarpon and V. oxycoccos), lingonberries (V. vitis-idaea), and blueberries (V. myrtillus). , 2002, Journal of agricultural and food chemistry.

[59]  S. Rhee,et al.  TAIR: a resource for integrated Arabidopsis data , 2002, Functional & Integrative Genomics.

[60]  T. McGhie,et al.  Color in fruit of the genus actinidia: carotenoid and chlorophyll compositions. , 2002, Journal of agricultural and food chemistry.

[61]  R. Henry,et al.  Evaluating the potential of SSR flanking regions for examining taxonomic relationships in the Vitaceae , 2002, Theoretical and Applied Genetics.

[62]  Rolf Apweiler,et al.  InterProScan - an integration platform for the signature-recognition methods in InterPro , 2001, Bioinform..

[63]  C. Bonner,et al.  Broad-specificity quinate (shikimate) dehydrogenasefrom Pinus taeda needles , 2000 .

[64]  B. M. Lange,et al.  Isoprenoid biosynthesis: the evolution of two ancient and distinct pathways across genomes. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[65]  I. Longden,et al.  EMBOSS: the European Molecular Biology Open Software Suite. , 2000, Trends in genetics : TIG.

[66]  K. Klages,et al.  Seasonal Concentrations of Non-structural Carbohydrates of Five Actinidia Species in Fruit, Leaf and Fine Root Tissue , 2000 .

[67]  S. Robinson,et al.  Differential screening indicates a dramatic change in mRNA profiles during grape berry ripening. Cloning and characterization of cDNAs encoding putative cell wall and stress response proteins. , 2000, Plant physiology.

[68]  Toshimichi Ikemura,et al.  Codon usage tabulated from international DNA sequence databases: status for the year 2000 , 2000, Nucleic Acids Res..

[69]  X. Huang,et al.  CAP3: A DNA sequence assembly program. , 1999, Genome research.

[70]  K. Herrmann,et al.  THE SHIKIMATE PATHWAY. , 1999, Annual review of plant physiology and plant molecular biology.

[71]  E. Dirlewanger,et al.  Mapping QTLs controlling fruit quality in peach (Prunus persica (L.) Batsch) , 1999, Theoretical and Applied Genetics.

[72]  L. Fraser,et al.  Development of sex-linked PCR markers for gender identification in Actinidia , 1998, Theoretical and Applied Genetics.

[73]  D. Starrett,et al.  A gene coding for tomato fruit beta-galactosidase II is expressed during fruit ripening. Cloning, characterization, and expression pattern. , 1998, Plant physiology.

[74]  E. Gantt,et al.  GENES AND ENZYMES OF CAROTENOID BIOSYNTHESIS IN PLANTS. , 1998, Annual review of plant physiology and plant molecular biology.

[75]  E. Pastorello,et al.  Identification of actinidin as the major allergen of kiwi fruit. , 1998, The Journal of allergy and clinical immunology.

[76]  E. Macrae,et al.  myo-Inositol is the major sugar in Actinidia arguta during early fruit development , 1998 .

[77]  R. Atkinson,et al.  Biochemical and molecular characterisation of xyloglucan endotransglycosylase from ripe kiwifruit , 1998, Planta.

[78]  K. Müntz Globulins from Legume Seeds: Structure and Function during Storage and Reactivation , 1998 .

[79]  G. Burdock,et al.  Fenaroli's Handbook of Flavor Ingredients , 1997 .

[80]  H. Steinhart,et al.  Isolation and characterization of a major allergen in kiwi fruit , 1997 .

[81]  F. Harker,et al.  Changes in firmness of the outer pericarp, inner pericarp, and core of Actinidia species during ripening , 1997 .

[82]  B. Pogson,et al.  Functional analysis of the beta and epsilon lycopene cyclase enzymes of Arabidopsis reveals a mechanism for control of cyclic carotenoid formation. , 1996, The Plant cell.

[83]  Roderic D. M. Page,et al.  TreeView: an application to display phylogenetic trees on personal computers , 1996, Comput. Appl. Biosci..

[84]  M. Duranti,et al.  The molecular basis for N-glycosylation in the 11S globulin (legumin) of lupin seed , 1995, Journal of protein chemistry.

[85]  D. Roby,et al.  hsr203J, a tobacco gene whose activation is rapid, highly localized and specific for incompatible plant/pathogen interactions. , 1994, The Plant journal : for cell and molecular biology.

[86]  M. Gómez-Lim,et al.  A Method for Extracting Intact RNA from Fruits Rich in Polysaccharides using Ripe Mango Mesocarp , 1992 .

[87]  A. Ferguson,et al.  VITAMIN C IN ACTINIDIA , 1992 .

[88]  P. Langridge,et al.  Purification and biochemical characterization of triticin, a legumin-like protein in wheat endosperm , 1991 .

[89]  H. Young,et al.  Relationships between sensory properties and chemical composition of kiwifruit (Actinidia deliciosa) , 1991 .

[90]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[91]  E. F. Walton,et al.  Growth and compositional changes in kiwifruit berries from three Californian locations. , 1990 .

[92]  M. K. Yates,et al.  Volatile flavour constituents of feijoa (Feijoa sellowiana)—analysis of fruit flesh , 1990 .

[93]  A. Shutov,et al.  Degradation of storage proteins in germinating seeds , 1987 .

[94]  I. Altosaar,et al.  Homology between legumin-like polypeptides from cereals and pea. , 1985, The Biochemical journal.

[95]  B. L. Fox Organic chemistry, second edition , 1983 .

[96]  R. Fessenden,et al.  Organic Chemistry, Second Edition , 1979 .

[97]  T. Sakai,et al.  DEHYDROIRIDODIAL, THE PUNGENT PRINCIPLE OF ACTINIDIA POLYGAMA MIQ. , 1978 .

[98]  S. Isoe,et al.  The structure of neomatatabiol, the potent attractant for from miq. , 1968 .

[99]  D. Guadagni,et al.  Identification and organoleptic evaluation of compounds in Delicious apple essence , 1967 .