Inhibitory luminopsins: genetically-encoded bioluminescent opsins for versatile, scalable, and hardware-independent optogenetic inhibition

Optogenetic techniques provide an unprecedented ability to precisely manipulate neural activity in the context of complex neural circuitry. Although the toolbox of optogenetic probes continues to expand at a rapid pace with more efficient and responsive reagents, hardware-based light delivery is still a major hurdle that limits its practical use in vivo. We have bypassed the challenges of external light delivery by directly coupling a bioluminescent light source (a genetically encoded luciferase) to an inhibitory opsin, which we term an inhibitory luminopsin (iLMO). iLMO was shown to suppress action potential firing and synchronous bursting activity in vitro in response to both external light and luciferase substrate. iLMO was further shown to suppress single-unit firing rate and local field potentials in the hippocampus of anesthetized rats. Finally, expression of iLMO was scaled up to multiple structures of the basal ganglia to modulate rotational behavior of freely moving animals in a hardware-independent fashion. This novel class of optogenetic probes demonstrates how non-invasive inhibition of neural activity can be achieved, which adds to the versatility, scalability, and practicality of optogenetic applications in freely behaving animals.

[1]  Steve M. Potter,et al.  An extremely rich repertoire of bursting patterns during the development of cortical cultures , 2006, BMC Neuroscience.

[2]  K. Deisseroth,et al.  eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications , 2008, Brain cell biology.

[3]  Tim C. Lei,et al.  Light Scattering Properties Vary across Different Regions of the Adult Mouse Brain , 2013, PloS one.

[4]  G. Buzsáki Theta Oscillations in the Hippocampus , 2002, Neuron.

[5]  K. Deisseroth,et al.  Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri , 2008, Nature Neuroscience.

[6]  T. A. Ryan,et al.  Activity-Driven Local ATP Synthesis Is Required for Synaptic Function , 2014, Cell.

[7]  Garret D Stuber,et al.  Construction of implantable optical fibers for long-term optogenetic manipulation of neural circuits , 2011, Nature Protocols.

[8]  D. Trono,et al.  Production and Titration of Lentiviral Vectors , 2006, Current protocols in neuroscience.

[9]  William W. Ward,et al.  ENERGY TRANSFER VIA PROTEIN‐PROTEIN INTERACTION IN RENILLA BIOLUMINESCENCE , 1978 .

[10]  Jessica A. Cardin,et al.  Noninvasive optical inhibition with a red-shifted microbial rhodopsin , 2014, Nature Neuroscience.

[11]  Partha P. Mitra,et al.  Chronux: A platform for analyzing neural signals , 2010, Journal of Neuroscience Methods.

[12]  R. Quian Quiroga,et al.  Unsupervised Spike Detection and Sorting with Wavelets and Superparamagnetic Clustering , 2004, Neural Computation.

[13]  Wenjun Yan,et al.  Medial prefrontal activity during delay period contributes to learning of a working memory task , 2014, Science.

[14]  M. Jann,et al.  Reversible metabolism of clozapine and clozapine N-oxide in schizophrenic patients , 1998, Progress in Neuro-Psychopharmacology and Biological Psychiatry.

[15]  M. Markus,et al.  On-off intermittency and intermingledlike basins in a granular medium. , 2002, Physical review. E, Statistical, nonlinear, and soft matter physics.

[16]  Yongling Zhu,et al.  Identification of Sequence Motifs That Target Neuronal Nicotinic Receptors to Dendrites and Axons , 2006, The Journal of Neuroscience.

[17]  E. Entcheva,et al.  Optogenetics' promise: pacing and cardioversion by light? , 2014, Future cardiology.

[18]  P. Blanchet,et al.  Opposite rotation induced by dopamine agonists in rats with unilateral lesions of the globus pallidus or substantia nigra Research report , 1998, Behavioural Brain Research.

[19]  Sanjiv S. Gambhir,et al.  Bioluminescence resonance energy transfer (BRET) imaging of protein–protein interactions within deep tissues of living subjects , 2011, Proceedings of the National Academy of Sciences.

[20]  K. L. Montgomery,et al.  Optogenetic Control of Targeted Peripheral Axons in Freely Moving Animals , 2013, PloS one.

[21]  Steve M. Potter,et al.  Closed-Loop, Multichannel Experimentation Using the Open-Source NeuroRighter Electrophysiology Platform , 2013, Front. Neural Circuits.

[22]  Steve M. Potter,et al.  How to Culture, Record and Stimulate Neuronal Networks on Micro-electrode Arrays (MEAs) , 2010, Journal of visualized experiments : JoVE.

[23]  K. Deisseroth,et al.  Molecular and Cellular Approaches for Diversifying and Extending Optogenetics , 2010, Cell.

[24]  B. Roth,et al.  Remote Control of Neuronal Signaling , 2011, Pharmacological Reviews.

[25]  Steve M. Potter,et al.  A Low-Cost Multielectrode System for Data Acquisition Enabling Real-Time Closed-Loop Processing with Rapid Recovery from Stimulation Artifacts , 2009, Front. Neuroeng..

[26]  Qingming Luo,et al.  Homeostatically regulated synchronized oscillations induced by short-term tetrodotoxin treatment in cultured neuronal network , 2009, Biosyst..

[27]  George J. Augustine,et al.  Light-Emitting Channelrhodopsins for Combined Optogenetic and Chemical-Genetic Control of Neurons , 2013, PloS one.

[28]  Takahiro Kimura,et al.  Optimization of enzyme–substrate pairing for bioluminescence imaging of gene transfer using Renilla and Gaussia luciferases , 2010, The journal of gene medicine.

[29]  S. Jacques Optical properties of biological tissues: a review , 2013, Physics in medicine and biology.

[30]  D. Kleinfeld,et al.  ReaChR: A red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation , 2013, Nature Neuroscience.

[31]  Takeharu Nagai,et al.  Luminescent proteins for high-speed single-cell and whole-body imaging , 2012, Nature Communications.

[32]  Lief E. Fenno,et al.  The development and application of optogenetics. , 2011, Annual review of neuroscience.

[33]  C. Akerman,et al.  Optogenetic silencing strategies differ in their effects on inhibitory synaptic transmission , 2012, Nature Neuroscience.

[34]  G. Fisone,et al.  Acquisition and expression of conditioned taste aversion differentially affects extracellular signal regulated kinase and glutamate receptor phosphorylation in rat prefrontal cortex and nucleus accumbens , 2014, Front. Behav. Neurosci..

[35]  Walter P. Abhayaratna,et al.  Effects of Changes in Adiposity and Physical Activity on Preadolescent Insulin Resistance: The Australian LOOK Longitudinal Study , 2012, PloS one.

[36]  Steve M. Potter,et al.  Controlling Bursting in Cortical Cultures with Closed-Loop Multi-Electrode Stimulation , 2005, The Journal of Neuroscience.

[37]  B. Roth,et al.  A chemical-genetic approach for precise spatio-temporal control of cellular signaling. , 2010, Molecular bioSystems.

[38]  Feng Zhang,et al.  An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology , 2007, Journal of neural engineering.

[39]  Karl Deisseroth,et al.  Optogenetics in Neural Systems , 2011, Neuron.

[40]  Eva A Naumann,et al.  Monitoring Neural Activity with Bioluminescence during Natural Behavior , 2010, Nature Neuroscience.

[41]  C. Brayton,et al.  Optogenetic inhibition of neurons by internal light production , 2014, Front. Behav. Neurosci..

[42]  Jerry Pelletier,et al.  Short RNAs repress translation after initiation in mammalian cells. , 2006, Molecular cell.

[43]  Hans-Ulrich Dodt,et al.  Low Dose Isoflurane Exerts Opposing Effects on Neuronal Network Excitability in Neocortex and Hippocampus , 2012, PloS one.

[44]  Osamu Shimomura,et al.  Solubilizing Coelenterazine in Water with Hydroxypropyl-β-cyclodextrin , 1997 .

[45]  S S Gambhir,et al.  Optical imaging of Renilla luciferase, synthetic Renilla luciferase, and firefly luciferase reporter gene expression in living mice. , 2004, Journal of biomedical optics.

[46]  R Quian Quiroga,et al.  Event synchronization: a simple and fast method to measure synchronicity and time delay patterns. , 2002, Physical review. E, Statistical, nonlinear, and soft matter physics.

[47]  S. Roth,et al.  Inhalation anaesthetics exhibit pathway-specific and differential actions on hippocampal synaptic responses in vitro. , 1988, British journal of anaesthesia.