Anaerococcus jeddahensis sp. nov., a New Bacterial Species Isolated From Healthy Nomadic Bedouin Woman From Saudi Arabia

[1]  C. Robert,et al.  Dakarella massiliensis gen. nov., sp. nov., strain ND3T: a new bacterial genus isolated from the female genital tract , 2017, New microbes and new infections.

[2]  D. Raoult,et al.  Taxonogenomics: Genome of a New Organism , 2022 .

[3]  Didier Raoult,et al.  Cautionary tale of using 16S rRNA gene sequence similarity values in identification of human-associated bacterial species. , 2015, International journal of systematic and evolutionary microbiology.

[4]  Didier Raoult,et al.  The Rebirth of Culture in Microbiology through the Example of Culturomics To Study Human Gut Microbiota , 2015, Clinical Microbiology Reviews.

[5]  C. Robert,et al.  Non-contiguous finished genome sequence and description of Anaerococcus provenciensis sp. nov. , 2014, Standards in genomic sciences.

[6]  G Kahlmeter,et al.  Development of the EUCAST disk diffusion antimicrobial susceptibility testing method and its implementation in routine microbiology laboratories. , 2014, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[7]  J. Chun,et al.  Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. , 2014, International Journal of Systematic and Evolutionary Microbiology.

[8]  D. Raoult,et al.  A polyphasic strategy incorporating genomic data for the taxonomic description of novel bacterial species. , 2014, International journal of systematic and evolutionary microbiology.

[9]  C. Robert,et al.  Culturomics identified 11 new bacterial species from a single anorexia nervosa stool sample , 2013, European Journal of Clinical Microbiology & Infectious Diseases.

[10]  Alexander F. Auch,et al.  Genome sequence-based species delimitation with confidence intervals and improved distance functions , 2013, BMC Bioinformatics.

[11]  D Raoult,et al.  Microbial culturomics: paradigm shift in the human gut microbiome study. , 2012, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[12]  D. Raoult,et al.  Non-contiguous finished genome sequence and description of Anaerococcus senegalensis sp. nov. , 2012, Standards in genomic sciences.

[13]  N. Carrier,et al.  The Complex Vaginal Flora of West African Women with Bacterial Vaginosis , 2011, PloS one.

[14]  David S. Wishart,et al.  PHAST: A Fast Phage Search Tool , 2011, Nucleic Acids Res..

[15]  D. Raoult,et al.  Burden of emerging anaerobes in the MALDI-TOF and 16S rRNA gene sequencing era. , 2011, Anaerobe.

[16]  Miriam L. Land,et al.  Trace: Tennessee Research and Creative Exchange Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification Recommended Citation Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification , 2022 .

[17]  Lu Wang,et al.  The NIH Human Microbiome Project. , 2009, Genome research.

[18]  Matthew Berriman,et al.  DNAPlotter: circular and linear interactive genome visualization , 2008, Bioinform..

[19]  Rick L. Stevens,et al.  The RAST Server: Rapid Annotations using Subsystems Technology , 2008, BMC Genomics.

[20]  S. Jain,et al.  Septic arthritis in a native joint due to Anaerococcus prevotii , 2007, Journal of Clinical Pathology.

[21]  Peter F. Hallin,et al.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes , 2007, Nucleic acids research.

[22]  S. Finegold,et al.  Peptoniphilus gorbachii sp. nov., Peptoniphilus olsenii sp. nov., and Anaerococcus murdochii sp. nov. Isolated from Clinical Specimens of Human Origin , 2007, Journal of Clinical Microbiology.

[23]  André Gilles,et al.  FIGENIX: Intelligent automation of genomic annotation: expertise integration in a new software platform , 2005, BMC Bioinformatics.

[24]  F. Blattner,et al.  Mauve: multiple alignment of conserved genomic sequence with rearrangements. , 2004, Genome research.

[25]  A. Krogh,et al.  A combined transmembrane topology and signal peptide prediction method. , 2004, Journal of molecular biology.

[26]  T. Ezaki,et al.  Proposal of the genera Anaerococcus gen. nov., Peptoniphilus gen. nov. and Gallicola gen. nov. for members of the genus Peptostreptococcus. , 2001, International journal of systematic and evolutionary microbiology.

[27]  Kim Rutherford,et al.  Artemis: sequence visualization and annotation , 2000, Bioinform..

[28]  D. Murdoch.  Gram-Positive Anaerobic Cocci , 1998, Clinical Microbiology Reviews.

[29]  R. Mutters,et al.  Taxonomic update and clinical significance of species within the genus Peptostreptococcus. , 1997, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[30]  S. Eddy,et al.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. , 1997, Nucleic acids research.

[31]  T. Ezaki,et al.  Determination of 16S ribosomal RNA sequences of all members of the genus Peptostreptococcus and their phylogenetic position. , 1994, FEMS microbiology letters.

[32]  Jacques Dainat,et al.  Integration of Evolutionary Biology Concepts for Functional Annotation and Automation of Complex Research in Evolution: The Multi-Agent Software System DAGOBAH , 2011 .

[33]  Erko Stackebrant.  Molecular taxonomic parameters , 2011 .

[34]  Marguerita Sasser,et al.  Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids Technical Note # 101 , 2001 .