Systematic Discovery of New Recognition Peptides Mediating Protein Interaction Networks
暂无分享,去创建一个
T. Gibson | R. Russell | Victor Neduva | R. Linding | Isabelle Su-Angrand | A. Stark | F. De Masi | Joe D. Lewis | Luis Serrano | A. Stark | R. Russell | Federico De Masi
[1] B. Stillman,et al. Coordinated leading and lagging strand synthesis during SV40 DNA replication in vitro requires PCNA , 1988, Cell.
[2] D. E. Anderson,et al. Expression and nitrogen-15 labeling of proteins for proton and nitrogen-15 nuclear magnetic resonance. , 1989, Methods in enzymology.
[3] D. Barford,et al. Purification and crystallization of the catalytic domain of human protein tyrosine phosphatase 1B expressed in Escherichia coli. , 1994, Journal of molecular biology.
[4] M. Kretzschmar,et al. A novel mediator of class II gene transcription with homology to viral immediate-early transcriptional regulators , 1994, Cell.
[5] Roger Brent,et al. Groucho is required for Drosophila neurogenesis, segmentation, and sex determination and interacts directly with hairy-related bHLH proteins , 1994, Cell.
[6] R. Roeder,et al. Purification, cloning, and characterization of a human coactivator, PC4, that mediates transcriptional activation of class II genes , 1994, Cell.
[7] A. Omori,et al. A novel gene, Translin, encodes a recombination hotspot binding protein associated with chromosomal translocations , 1995, Nature Genetics.
[8] J. M. Boyd,et al. Molecular cloning and characterization of a cellular phosphoprotein that interacts with a conserved C-terminal domain of adenovirus E1A involved in negative modulation of oncogenic transformation. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[9] Kornelia Polyak,et al. Mechanism of CDK activation revealed by the structure of a cyclinA-CDK2 complex , 1995, Nature.
[10] W. Gu,et al. Testis-brain RNA-binding protein, a testicular translational regulatory RNA-binding protein, is present in the brain and binds to the 3' untranslated regions of transported brain mRNAs. , 1995, Biology of reproduction.
[11] L Serrano,et al. Rational design of specific high-affinity peptide ligands for the Abl-SH3 domain. , 1996, Biochemistry.
[12] Philip R. Cohen,et al. Structural basis for the recognition of regulatory subunits by the catalytic subunit of protein phosphatase 1 , 1997, The EMBO journal.
[13] P. Gros,et al. C-terminal domain of transcription cofactor PC4 reveals dimeric ssDNA binding site , 1997, Nature Structural Biology.
[14] Gapped BLAST and PSI-BLAST: A new , 1997 .
[15] T. Pawson,et al. Signaling through scaffold, anchoring, and adaptor proteins. , 1997, Science.
[16] Aris Floratos,et al. Combinatorial pattern discovery in biological sequences: The TEIRESIAS algorithm [published erratum appears in Bioinformatics 1998;14(2): 229] , 1998, Bioinform..
[17] Marius Sudol,et al. From Src Homology domains to other signaling modules: proposal of the `protein recognition code' , 1998, Oncogene.
[18] L. Serrano,et al. Crystal structure of the abl-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions. , 1998, Journal of molecular biology.
[19] W. Kaelin,et al. The Elongin BC complex interacts with the conserved SOCS-box motif present in members of the SOCS, ras, WD-40 repeat, and ankyrin repeat families. , 1998, Genes & development.
[20] G. Chinnadurai,et al. Structural Determinants Present in the C-terminal Binding Protein Binding Site of Adenovirus Early Region 1A Proteins* , 1998, The Journal of Biological Chemistry.
[21] M. Dottore,et al. Identification of a 14-3-3 Binding Sequence in the Common β Chain of the Granulocyte-Macrophage Colony-Stimulating Factor (GM-CSF), Interleukin-3 (IL-3), and IL-5 Receptors That Is Serine-Phosphorylated by GM-CSF , 1999 .
[22] M. Dottore,et al. Identification of a 14-3-3 binding sequence in the common beta chain of the granulocyte-macrophage colony-stimulating factor (GM-CSF), interleukin-3 (IL-3), and IL-5 receptors that is serine-phosphorylated by GM-CSF. , 1999, Blood.
[23] J. G. Zhang,et al. The conserved SOCS box motif in suppressors of cytokine signaling binds to elongins B and C and may couple bound proteins to proteasomal degradation. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[24] Hideyuki Okano,et al. WRM-1 Activates the LIT-1 Protein Kinase to Transduce Anterior/Posterior Polarity Signals in C. elegans , 1999, Cell.
[25] C. Mello,et al. MOM-4, a MAP kinase kinase kinase-related protein, activates WRM-1/LIT-1 kinase to transduce anterior/posterior polarity signals in C. elegans. , 1999, Molecular cell.
[26] G. Jensen,et al. Electron Crystal Structure of an RNA Polymerase II Transcription Elongation Complex , 1999, Cell.
[27] James R. Knight,et al. A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae , 2000, Nature.
[28] C. Nüsslein-Volhard,et al. The molecular motor dynein is involved in targeting Swallow and bicoid RNA to the anterior pole of Drosophila oocytes , 2000, Nature Cell Biology.
[29] E. Warbrick. The puzzle of PCNA's many partners. , 2000, BioEssays : news and reviews in molecular, cellular and developmental biology.
[30] H. Paudel,et al. Neuronal Cdc2-like Protein Kinase (Cdk5/p25) Is Associated with Protein Phosphatase 1 and Phosphorylates Inhibitor-2* , 2001, The Journal of Biological Chemistry.
[31] M. Bollen,et al. Combinatorial control of protein phosphatase-1. , 2001, Trends in biochemical sciences.
[32] R. Ozawa,et al. A comprehensive two-hybrid analysis to explore the yeast protein interactome , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[33] M. Yaffe,et al. A motif-based profile scanning approach for genome-wide prediction of signaling pathways , 2001, Nature Biotechnology.
[34] K. W. Lo,et al. The 8-kDa Dynein Light Chain Binds to Its Targets via a Conserved (K/R)XTQT Motif* , 2001, The Journal of Biological Chemistry.
[35] Chi-Hung Lin,et al. Identification of a Mouse Thiamine Transporter Gene as a Direct Transcriptional Target for p53* , 2001, The Journal of Biological Chemistry.
[36] Jeong Ho Chang,et al. Structural basis for the recognition of the E2F transactivation domain by the retinoblastoma tumor suppressor. , 2002, Genes & development.
[37] Kenneth R. Henry,et al. Protein Phosphatase-1 Binding to Scd5p Is Important for Regulation of Actin Organization and Endocytosis in Yeast* , 2002, The Journal of Biological Chemistry.
[38] A. Krainer,et al. Nuclear Export and Retention Signals in the RS Domain of SR Proteins , 2002, Molecular and Cellular Biology.
[39] Patrick Aloy,et al. The third dimension for protein interactions and complexes. , 2002, Trends in biochemical sciences.
[40] Peer Bork,et al. Recent improvements to the SMART domain-based sequence annotation resource , 2002, Nucleic Acids Res..
[41] B. Snel,et al. Comparative assessment of large-scale data sets of protein–protein interactions , 2002, Nature.
[42] G. Chinnadurai,et al. CtBP, an unconventional transcriptional corepressor in development and oncogenesis. , 2002, Molecular cell.
[43] S. Shenolikar,et al. Neurabins Recruit Protein Phosphatase-1 and Inhibitor-2 to the Actin Cytoskeleton* , 2002, The Journal of Biological Chemistry.
[44] Andrea Musacchio,et al. How SH3 domains recognize proline. , 2002, Advances in protein chemistry.
[45] Leszek Rychlewski,et al. ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins , 2003, Nucleic Acids Res..
[46] Michael Sattler,et al. High-resolution X-ray and NMR structures of the SMN Tudor domain: conformational variation in the binding site for symmetrically dimethylated arginine residues. , 2003, Journal of molecular biology.
[47] James R. Knight,et al. A Protein Interaction Map of Drosophila melanogaster , 2003, Science.
[48] T. Pawson,et al. Assembly of Cell Regulatory Systems Through Protein Interaction Domains , 2003, Science.
[49] Ewan Birney,et al. Discovering novel cis-regulatory motifs using functional networks. , 2003, Genome research.
[50] Maria Jesus Martin,et al. The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003 , 2003, Nucleic Acids Res..
[51] Hanno Steen,et al. Development of human protein reference database as an initial platform for approaching systems biology in humans. , 2003, Genome research.
[52] Julius Brennecke,et al. Identification of Drosophila MicroRNA Targets , 2003, PLoS biology.
[53] Christian von Mering,et al. STRING: a database of predicted functional associations between proteins , 2003, Nucleic Acids Res..
[54] Michael R. Green,et al. Arginine-serine-rich domains bound at splicing enhancers contact the branchpoint to promote prespliceosome assembly. , 2004, Molecular cell.
[55] S. L. Wong,et al. A Map of the Interactome Network of the Metazoan C. elegans , 2004, Science.
[56] Roberto Dominguez,et al. Structural basis of protein phosphatase 1 regulation , 2004, Nature.
[57] L. Castagnoli,et al. Protein Interaction Networks by Proteome Peptide Scanning , 2004, PLoS biology.
[58] R. Lin,et al. Phosphorylation by the β-Catenin/MAPK Complex Promotes 14-3-3-Mediated Nuclear Export of TCF/POP-1 in Signal-Responsive Cells in C. elegans , 2004, Cell.
[59] Y. Shamoo,et al. Structural and thermodynamic analysis of human PCNA with peptides derived from DNA polymerase-delta p66 subunit and flap endonuclease-1. , 2004, Structure.
[60] Robert D. Finn,et al. The Pfam protein families database , 2004, Nucleic Acids Res..
[61] Robert C. Edgar,et al. MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.
[62] R. Russell,et al. Linear motifs: Evolutionary interaction switches , 2005, FEBS letters.
[63] K. Lindblad-Toh,et al. Systematic discovery of regulatory motifs in human promoters and 3′ UTRs by comparison of several mammals , 2005, Nature.
[64] C. Benes,et al. The C2 Domain of PKCδ Is a Phosphotyrosine Binding Domain , 2005, Cell.
[65] C. Benes,et al. The C2 domain of PKCdelta is a phosphotyrosine binding domain. , 2005, Cell.
[66] John M. Walker,et al. C. elegans , 2006, Methods in Molecular Biology.