Efficient use of unlabeled data for protein sequence classification: a comparative study
暂无分享,去创建一个
[1] Jason Weston,et al. Mismatch String Kernels for SVM Protein Classification , 2002, NIPS.
[2] Michael Gribskov,et al. Use of Receiver Operating Characteristic (ROC) Analysis to Evaluate Sequence Matching , 1996, Comput. Chem..
[3] Vladimir Pavlovic,et al. Scalable Algorithms for String Kernels with Inexact Matching , 2008, NIPS.
[4] Vladimir Pavlovic,et al. Fast protein homology and fold detection with sparse spatial sample kernels , 2008, 2008 19th International Conference on Pattern Recognition.
[5] Ke Wang,et al. Profile-based string kernels for remote homology detection and motif extraction , 2004, Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004..
[6] Vladimir Vapnik,et al. Statistical learning theory , 1998 .
[7] T. N. Bhat,et al. The Protein Data Bank , 2000, Nucleic Acids Res..
[8] Maria Jesus Martin,et al. The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003 , 2003, Nucleic Acids Res..
[9] Adam Godzik,et al. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences , 2006, Bioinform..
[10] Tim J. P. Hubbard,et al. SCOP: a structural classification of proteins database , 1998, Nucleic Acids Res..
[11] Jason Weston,et al. Semi-supervised Protein Classification Using Cluster Kernels , 2003, NIPS.
[12] Vladimir Pavlovic,et al. Fast and accurate multi-class protein fold recognition with spatial sample kernels. , 2008, Computational systems bioinformatics. Computational Systems Bioinformatics Conference.
[13] David L. Wheeler,et al. GenBank , 2015, Nucleic Acids Res..
[14] A. D. McLachlan,et al. Profile analysis: detection of distantly related proteins. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[15] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[16] Jason Weston,et al. Multi-class Protein Classification Using Adaptive Codes , 2007, J. Mach. Learn. Res..
[17] Christina S. Leslie,et al. Fast String Kernels using Inexact Matching for Protein Sequences , 2004, J. Mach. Learn. Res..
[18] David Haussler,et al. A Discriminative Framework for Detecting Remote Protein Homologies , 2000, J. Comput. Biol..
[19] Sean R. Eddy,et al. Profile hidden Markov models , 1998, Bioinform..