Applying the Stream-Based Computing Model to Design Hardware Accelerators: A Case Study
暂无分享,去创建一个
[1] Thomas Ludwig,et al. RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees , 2005, Bioinform..
[2] John P. Huelsenbeck,et al. MrBayes 3: Bayesian phylogenetic inference under mixed models , 2003, Bioinform..
[3] Erik Lindholm,et al. NVIDIA Tesla: A Unified Graphics and Computing Architecture , 2008, IEEE Micro.
[4] Jung Ho Ahn,et al. Merrimac: Supercomputing with Streams , 2003, ACM/IEEE SC 2003 Conference (SC'03).
[5] Keshab K. Parhi,et al. VLSI digital signal processing systems , 1999 .
[6] J. Felsenstein. Evolutionary trees from DNA sequences: A maximum likelihood approach , 2005, Journal of Molecular Evolution.
[7] William Thies,et al. StreamIt: A Language for Streaming Applications , 2002, CC.
[8] Srinivas Aluru,et al. Large-scale maximum likelihood-based phylogenetic analysis on the IBM BlueGene/L , 2007, Proceedings of the 2007 ACM/IEEE Conference on Supercomputing (SC '07).
[9] Andrew Rambaut,et al. Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees , 1997, Comput. Appl. Biosci..
[10] Mendel Rosenblum,et al. Stream programming on general-purpose processors , 2005, 38th Annual IEEE/ACM International Symposium on Microarchitecture (MICRO'05).
[11] Ziheng Yang. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods , 1994, Journal of Molecular Evolution.
[12] Shuvra S. Bhattacharyya,et al. Functional DIF for Rapid Prototyping , 2008, 2008 The 19th IEEE/IFIP International Symposium on Rapid System Prototyping.