Identification of carbonylated proteins from enriched rat skeletal muscle mitochondria using affinity chromatography‐stable isotope labeling and tandem mass spectrometry
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Hongwei Xie | T. Griffin | D. Meany | Hongwei Xie | E. Arriaga | L. Thompson | Danni L. Meany | LaDora V. Thompson | Edgar A. Arriaga | Timothy J. Griffin
[1] Alexey I Nesvizhskii,et al. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. , 2002, Analytical chemistry.
[2] R. Ali,et al. The aging paradox: free radical theory of aging , 1999, Experimental Gerontology.
[3] F. Cross,et al. Accurate quantitation of protein expression and site-specific phosphorylation. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[4] J. Yates,et al. Protein identification at the low femtomole level from silver-stained gels using a new fritless electrospray interface for liquid chromatography-microspray and nanospray mass spectrometry. , 1998, Analytical biochemistry.
[5] Y. Clonis,et al. The affinity technology in downstream processing. , 1994, Journal of biotechnology.
[6] F. Regnier,et al. Proteomic analysis of carbonylated proteins in two‐dimensional gel electrophoresis using avidin‐fluorescein affinity staining , 2004, Electrophoresis.
[7] E. Stadtman,et al. Protein Oxidation in Aging, Disease, and Oxidative Stress* , 1997, The Journal of Biological Chemistry.
[8] L. Hood,et al. Complementary Profiling of Gene Expression at the Transcriptome and Proteome Levels in Saccharomyces cerevisiae*S , 2002, Molecular & Cellular Proteomics.
[9] Bradford W. Gibson,et al. Characterization of the human heart mitochondrial proteome , 2003, Nature Biotechnology.
[10] R. Aebersold,et al. Automated statistical analysis of protein abundance ratios from data generated by stable-isotope dilution and tandem mass spectrometry. , 2003, Analytical chemistry.
[11] W. Wriggers,et al. His73, Often Methylated, Is an Important Structural Determinant for Actin , 1999, The Journal of Biological Chemistry.
[12] Hamid Mirzaei,et al. Affinity chromatographic selection of carbonylated proteins followed by identification of oxidation sites using tandem mass spectrometry. , 2005, Analytical chemistry.
[13] R. Dean,et al. Stable markers of oxidant damage to proteins and their application in the study of human disease. , 1999, Free radical biology & medicine.
[14] L. Deterding,et al. Nanoscale packed-capillary liquid chromatography coupled with mass spectrometry using a coaxial continuous-flow fast atom bombardment interface. , 1991, Analytical chemistry.
[15] K. Davies,et al. Mitochondrial free radical generation, oxidative stress, and aging. , 2000, Free radical biology & medicine.
[16] X. Qian,et al. Proteomic analysis of mitochondrial proteins in cardiomyocytes from chronic stressed rat , 2004, Proteomics.
[17] R. S. Sohal,et al. Identification of oxidized proteins based on sodium dodecyl sulfate-polyacrylamide gel electrophoresis, immunochemical detection, isoelectric focusing, and microsequencing. , 1998, Analytical biochemistry.
[18] Ronald J. Moore,et al. Enrichment of integral membrane proteins for proteomic analysis using liquid chromatography-tandem mass spectrometry. , 2002, Journal of proteome research.
[19] Roberto Colombo,et al. Protein carbonylation in human diseases. , 2003, Trends in molecular medicine.
[20] M. Wilchek,et al. Application of avidin-biotin technology to affinity-based separations. , 1990, Journal of chromatography.
[21] C. Maier,et al. New role for an old probe: affinity labeling of oxylipid protein conjugates by N'-aminooxymethylcarbonylhydrazino d-biotin. , 2006, Analytical chemistry.
[22] N. Bykova,et al. Identification of oxidised proteins in the matrix of rice leaf mitochondria by immunoprecipitation and two-dimensional liquid chromatography-tandem mass spectrometry. , 2004, Phytochemistry.
[23] T. Colgan,et al. Search for cancer markers from endometrial tissues using differentially labeled tags iTRAQ and cICAT with multidimensional liquid chromatography and tandem mass spectrometry. , 2005, Journal of proteome research.
[24] K. Panneerselvam,et al. Oxidative Stress and DNA Single Strand Breaks in Skeletal Muscle of Aged Rats: Role of Carnitine and Lipoicacid , 2006, Biogerontology.
[25] S. Hussain,et al. Protein carbonyl formation in the diaphragm. , 2005, American journal of respiratory cell and molecular biology.
[26] N. Garg,et al. Oxidative modification of mitochondrial respiratory complexes in response to the stress of Trypanosoma cruzi infection. , 2004, Free radical biology & medicine.
[27] Joshua E. Elias,et al. Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome. , 2003, Journal of proteome research.
[28] K. Parker,et al. Multiplexed Protein Quantitation in Saccharomyces cerevisiae Using Amine-reactive Isobaric Tagging Reagents*S , 2004, Molecular & Cellular Proteomics.
[29] J. Yates,et al. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database , 1994, Journal of the American Society for Mass Spectrometry.
[30] John R Yates,et al. Analysis of quantitative proteomic data generated via multidimensional protein identification technology. , 2002, Analytical chemistry.
[31] Bradford W Gibson,et al. The human mitochondrial proteome: oxidative stress, protein modifications and oxidative phosphorylation. , 2005, The international journal of biochemistry & cell biology.
[32] J. Strahler,et al. Organellar Proteomics , 2006, Molecular & Cellular Proteomics.
[33] J. Rabek,et al. Oxidatively damaged proteins of heart mitochondrial electron transport complexes. , 2004, Biochimica et biophysica acta.
[34] Ruedi Aebersold,et al. The study of macromolecular complexes by quantitative proteomics , 2003, Nature Genetics.
[35] Stefani N. Thomas,et al. High-Throughput Proteomic-Based Identification of Oxidatively Induced Protein Carbonylation in Mouse Brain , 2003, Pharmaceutical Research.
[36] E. Stadtman,et al. Glutamic and aminoadipic semialdehydes are the main carbonyl products of metal-catalyzed oxidation of proteins. , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[37] T. Griffin,et al. Trade-off between high sensitivity and increased potential for false positive peptide sequence matches using a two-dimensional linear ion trap for tandem mass spectrometry-based proteomics. , 2006, Journal of proteome research.
[38] R. Aebersold,et al. Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry , 2001, Nature Biotechnology.
[39] Takeshi Ueno,et al. Proteomic method detects oxidatively induced protein carbonyls in muscles of a diabetes model Otsuka Long-Evans Tokushima Fatty (OLETF) rat. , 2003, Free radical biology & medicine.
[40] R. Aebersold,et al. Abundance ratio-dependent proteomic analysis by mass spectrometry. , 2003, Analytical chemistry.
[41] David Han,et al. Systematic Comparison of a Two-dimensional Ion Trap and a Three-dimensional Ion Trap Mass Spectrometer in Proteomics*S , 2005, Molecular & Cellular Proteomics.
[42] C. Bessant,et al. i-Tracker: For quantitative proteomics using iTRAQ™ , 2005, BMC Genomics.