Host species identity, site and time drive temperate tree phyllosphere bacterial community structure
暂无分享,去创建一个
[1] Usda Nrcs. The PLANTS Database , 2015 .
[2] S. Hubbell,et al. Relationships between phyllosphere bacterial communities and plant functional traits in a neotropical forest , 2014, Proceedings of the National Academy of Sciences.
[3] D. Crowley,et al. Bacterial Community Assemblages Associated with the Phyllosphere, Dermosphere, and Rhizosphere of Tree Species of the Atlantic Forest are Host Taxon Dependent , 2014, Microbial Ecology.
[4] Christian von Mering,et al. Ecological Consistency of SSU rRNA-Based Operational Taxonomic Units at a Global Scale , 2014, PLoS Comput. Biol..
[5] S. Kembel,et al. Plant traits and taxonomy drive host associations in tropical phyllosphere fungal communities1 , 2014 .
[6] Jiajie Zhang,et al. PEAR: a fast and accurate Illumina Paired-End reAd mergeR , 2013, Bioinform..
[7] S. Ruppel,et al. Progress in cultivation-independent phyllosphere microbiology , 2013, FEMS microbiology ecology.
[8] R Core Team,et al. R: A language and environment for statistical computing. , 2014 .
[9] Hojeong Kang,et al. Changes in Soil Bacterial Community Structure with Increasing Disturbance Frequency , 2013, Microbial Ecology.
[10] P. Schulze-Lefert,et al. Structure and functions of the bacterial microbiota of plants. , 2013, Annual review of plant biology.
[11] J. Vorholt. Microbial life in the phyllosphere , 2012, Nature Reviews Microbiology.
[12] M. Desprez-Loustau,et al. Spatial variability of phyllosphere fungal assemblages: genetic distance predominates over geographic distance in a European beech stand (Fagus sylvatica) , 2012 .
[13] Omri M. Finkel,et al. Bacterial anoxygenic photosynthesis on plant leaf surfaces. , 2012, Environmental microbiology reports.
[14] J. Handelsman,et al. Beyond the Venn diagram: the hunt for a core microbiome. , 2012, Environmental microbiology.
[15] J. Chun,et al. Distinctive Phyllosphere Bacterial Communities in Tropical Trees , 2012, Microbial Ecology.
[16] Omri M. Finkel,et al. Geographical Location Determines the Population Structure in Phyllosphere Microbial Communities of a Salt-Excreting Desert Tree , 2011, Applied and Environmental Microbiology.
[17] C. Huttenhower,et al. Metagenomic biomarker discovery and explanation , 2011, Genome Biology.
[18] T. Thomas,et al. Composition, uniqueness and variability of the epiphytic bacterial community of the green alga Ulva australis , 2011, The ISME Journal.
[19] J. Vorholt,et al. Protection of Arabidopsis thaliana against Leaf-Pathogenic Pseudomonas syringae by Sphingomonas Strains in a Controlled Model System , 2011, Applied and Environmental Microbiology.
[20] Nathan J B Kraft,et al. Functional traits and the growth-mortality trade-off in tropical trees. , 2010, Ecology.
[21] J. Leveau,et al. A PCR-based toolbox for the culture-independent quantification of total bacterial abundances in plant environments. , 2010, Journal of microbiological methods.
[22] Rob Knight,et al. The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves. , 2010, Environmental microbiology.
[23] A. Newton,et al. Managing the ecology of foliar pathogens: ecological tolerance in crops , 2010 .
[24] Robert C. Edgar,et al. Search and clustering orders of magnitude faster than BLAST , 2010, Bioinform..
[25] Marcus J. Claesson,et al. Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions , 2010, Nucleic acids research.
[26] Jean M. Macklaim,et al. Microbiome Profiling by Illumina Sequencing of Combinatorial Sequence-Tagged PCR Products , 2010, PLoS ONE.
[27] Campbell O. Webb,et al. Picante: R tools for integrating phylogenies and ecology , 2010, Bioinform..
[28] William A. Walters,et al. QIIME allows analysis of high-throughput community sequencing data , 2010, Nature Methods.
[29] J. Vorholt,et al. Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere , 2010, The ISME Journal.
[30] F. Bushman,et al. QIIME allows integration and analysis of high-throughput community sequencing data. Nat. Meth. , 2010 .
[31] Hadley Wickham,et al. ggplot2 - Elegant Graphics for Data Analysis (2nd Edition) , 2017 .
[32] K. Jones,et al. Massively parallel 454 sequencing indicates hyperdiverse fungal communities in temperate Quercus macrocarpa phyllosphere. , 2009, The New phytologist.
[33] B. Roschitzki,et al. Community proteogenomics reveals insights into the physiology of phyllosphere bacteria , 2009, Proceedings of the National Academy of Sciences.
[34] M. Shishido,et al. Powdery mildew-infection changes bacterial community composition in the phyllosphere. , 2009, Microbes and environments.
[35] A. Arnold,et al. Fungal endophytes: diversity and functional roles. , 2009, The New phytologist.
[36] J. Chave,et al. Towards a Worldwide Wood Economics Spectrum 2 . L E a D I N G D I M E N S I O N S I N W O O D F U N C T I O N , 2022 .
[37] N. Fierer,et al. Bacterial Succession on the Leaf Surface: A Novel System for Studying Successional Dynamics , 2009, Microbial Ecology.
[38] T. Osono. Endophytic and epiphytic phyllosphere fungi of Camellia japonica: seasonal and leaf age-dependent variations , 2008, Mycologia.
[39] Wolfgang Wanek,et al. Nitrogen fixation by phyllosphere bacteria associated with higher plants and their colonizing epiphytes of a tropical lowland rainforest of Costa Rica , 2008, The ISME Journal.
[40] E. Herre,et al. Ecological implications of anti-pathogen effects of tropical fungal endophytes and mycorrhizae. , 2007, Ecology.
[41] W. Schwab,et al. Molecular interaction between Methylobacterium extorquens and seedlings: growth promotion, methanol consumption, and localization of the methanol emission site. , 2006, Journal of experimental botany.
[42] Ü. Niinemets,et al. Tolerance to shade, drought, and waterlogging of temperate northern hemisphere trees and shrubs , 2006 .
[43] Rob Knight,et al. UniFrac – An online tool for comparing microbial community diversity in a phylogenetic context , 2006, BMC Bioinformatics.
[44] T. Osono. Role of phyllosphere fungi of forest trees in the development of decomposer fungal communities and decomposition processes of leaf litter. , 2006, Canadian journal of microbiology.
[45] D. Crowley,et al. Bacterial Diversity in Tree Canopies of the Atlantic Forest , 2006, Science.
[46] P. Janssen. Identifying the Dominant Soil Bacterial Taxa in Libraries of 16S rRNA and 16S rRNA Genes , 2006, Applied and Environmental Microbiology.
[47] Eoin L. Brodie,et al. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB , 2006, Applied and Environmental Microbiology.
[48] P. Normand. The Families Frankiaceae, Geodermatophilaceae, Acidothermaceae and Sporichthyaceae , 2006 .
[49] Vanja Klepac-Ceraj,et al. PCR-Induced Sequence Artifacts and Bias: Insights from Comparison of Two 16S rRNA Clone Libraries Constructed from the Same Sample , 2005, Applied and Environmental Microbiology.
[50] Sean C. Thomas,et al. The worldwide leaf economics spectrum , 2004, Nature.
[51] Korbinian Strimmer,et al. APE: Analyses of Phylogenetics and Evolution in R language , 2004, Bioinform..
[52] D. Tilman,et al. Fungal endophytes limit pathogen damage in a tropical tree , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[53] S. Lindow,et al. Microbiology of the Phyllosphere , 2003, Applied and Environmental Microbiology.
[54] Bill Shipley,et al. Dry matter content as a measure of dry matter concentration in plants and their parts , 2002 .
[55] V. J. Elliott,et al. Fifty years of phyllosphere microbiology: significant contributions to research in related fields. , 2002 .
[56] G. Gilbert. Evolutionary ecology of plant diseases in natural ecosystems. , 2002, Annual review of phytopathology.
[57] M. Chelius,et al. The Diversity of Archaea and Bacteria in Association with the Roots of Zea mays L. , 2001, Microbial Ecology.
[58] Marti J. Anderson,et al. A new method for non-parametric multivariate analysis of variance in ecology , 2001 .
[59] J. Andrews,et al. The Ecology and Biogeography of Microorganisms on Plant Surfaces. , 2000, Annual review of phytopathology.
[60] S. Lindow,et al. Role of Leaf Surface Sugars in Colonization of Plants by Bacterial Epiphytes , 2000, Applied and Environmental Microbiology.
[61] R. Schmid,et al. Trees In Canada , 1995 .
[62] D. Altman,et al. Multiple significance tests: the Bonferroni method. , 1995, BMJ.
[63] M. Abrams,et al. Leaf structural characteristics of 31 hardwood and conifer tree species in central Wisconsin: influence of light regime and shade-tolerance rank. , 1990 .
[64] R. Burns,et al. Silvics of North America: 1. Conifers; 2. Hardwoods , 1990 .
[65] Y. Hochberg. A sharper Bonferroni procedure for multiple tests of significance , 1988 .
[66] H. Chandler. Database , 1985 .
[67] H. Biebl,et al. Isolation of Members of the Family Rhodospirillaceae , 1981 .
[68] S. Lindow,et al. Distribution of ice nucleation-active bacteria on plants in nature , 1978, Applied and environmental microbiology.