Quantitative Numerical Analysis of g Strain in the EPR of Distributed Systems and Its Importance for Multicenter Metalloproteins

A method for simulation of inhomogeneously broadened EPR of metallo-proteins based on recent theoretical advances is surveyed critically in terms of efficiency and accuracy. From the quality of the experimental spectrum, minimal boundary conditions are established for the spatial integration over the g-strained polycrystal. Computational efficiency is achieved by generating the S = 12 spectrum as an absorption in g space, reducing the number of molecular orientations computed by filtering mosaic artifacts from the Fourier-transformed spectrum, and generating the lineshape due to g strain from a tabulated distribution function. These techniques provide a reduction in computation time by some two orders of magnitude and make the data analysis of EPR of metalloproteins by minimization practical. The resulting simulation program is superior to current approaches in that it does not introduce artifactual multiplicities, and it is expected to require a smaller number of fitting parameters for the quantitative analysis of most cases. To illustrate its potential, the method is applied to EPR data from the iron-sulfur centers in NADH:Q oxidoreductase and in QH2:ferricytochrome c oxidoreductase, clarifying existing controversies on the stoichiometries of these centers.

[1]  H. Beinert,et al.  Electron paramagnetic resonance-detectable electron acceptors in beef heart mitochondria. Reduced diphosphopyridine nucleotide ubiquinone reductase segment of the electron transfer system. , 1974, The Journal of biological chemistry.

[2]  H. Watari,et al.  Dependence of EPR Transition Probability on Magnetic Field , 1970 .

[3]  E. C. Slater,et al.  The pathway of electrons through OH2:cytochrome c oxidoreductase studied by pre-steady -state kinetics. , 1982, Biochimica et biophysica acta.

[4]  J. D. Swalen,et al.  Paramagnetic resonance line shapes and magnetic parameters of polycrystalline substances , 1962 .

[5]  B. Trumpower Function of the iron-sulfur protein of the cytochrome b-c1 segment in electron-transfer and energy-conserving reactions of the mitochondrial respiratory chain. , 1981, Biochimica et biophysica acta.

[6]  F. J. Leeuwerik,et al.  EPR signals of NADH: Q oxidoreductase. Shape and intensity. , 1977, Biochimica et biophysica acta.

[7]  Y. Hatefi,et al.  Iron-sulfur N-1 clusters studied in NADH-ubiquinone oxidoreductase and in soluble NADH dehydrogenase. , 1981, Journal of Biological Chemistry.

[8]  J. Salerno Cytochrome electron spin resonance line shapes, ligand fields, and components stoichiometry in ubiquinol-cytochrome c oxidoreductase. , 1984, The Journal of biological chemistry.

[9]  H. Beinert,et al.  New insights, ideas and unanswered questions concerning iron-sulfur clusters in mitochondria. , 1982, Biochimica et biophysica acta.

[10]  F. J. Leeuwerik,et al.  The multiplicity and stoichiometry of the prosthetic groups in QH2: cytochrome c oxidoreductase as studied by EPR. , 1979, Biochimica et biophysica acta.

[11]  W. Hagen,et al.  Analysis of strain-induced EPR-line shapes and anisotropic spin-lattice relaxation in a [2Fe-2S] ferredoxin. , 1982, Biochimica et biophysica acta.

[12]  E. O. Brigham,et al.  The Fast Fourier Transform , 1967, IEEE Transactions on Systems, Man, and Cybernetics.

[13]  W. Hagen Dislocation strain broadening as a source of anisotropic linewidth and asymmetrical lineshape in the electron paramagnetic resonance spectrum of metalloproteins and related systems , 1981 .

[14]  W. Hagen,et al.  A comparison of the respiratory chain in particles from Paracoccus denitrificans and bovine heart mitochondria by EPR spectroscopy. , 1980, Biochimica et biophysica acta.

[15]  F. Kneubühl Line Shapes of Electron Paramagnetic Resonance Signals Produced by Powders, Glasses, and Viscous Liquids , 1960 .

[16]  H. Beinert,et al.  Multiple frequency EPR studies on three forms of oxidized cytochrome c oxidase. , 1983, Biochimica et biophysica acta.

[17]  S. Albracht Some new paramagnetic centers in submitochondrial particles detectable by EPR spectroscopy. , 1974, Biochimica et biophysica acta.

[18]  T. Vänngård,et al.  EPR signal intensity and powder shapes: A reexamination , 1975 .