Integrated analysis of long noncoding RNA and mRNA expression profile in children with obesity by microarray analysis

[1]  Weihua Liu,et al.  LncRNA Gm15290 sponges miR-27b to promote PPARγ-induced fat deposition and contribute to body weight gain in mice. , 2017, Biochemical and biophysical research communications.

[2]  Teng Zhang,et al.  Long non-coding RNAs could act as vectors for paternal heredity of high fat diet-induced obesity , 2017, Oncotarget.

[3]  G. Radaelli,et al.  Serum salicylic acid and fruit and vegetable consumption in obese and normal-weight children: a pilot-study , 2017, International journal of food sciences and nutrition.

[4]  Yan Zhang,et al.  Integrated Analysis of LncRNA-mRNA Co-Expression Profiles in Patients with Moyamoya Disease , 2017, Scientific Reports.

[5]  Jackie Y Ying,et al.  Comparison of Circulating Tumour Cells and Circulating Cell-Free Epstein-Barr Virus DNA in Patients with Nasopharyngeal Carcinoma Undergoing Radiotherapy , 2016, Scientific Reports.

[6]  X. Wang,et al.  The role and possible mechanism of lncRNA U90926 in modulating 3T3-L1 preadipocyte differentiation , 2016, International Journal of Obesity.

[7]  Bin Xu,et al.  LncRNA SRA promotes hepatic steatosis through repressing the expression of adipose triglyceride lipase (ATGL) , 2016, Scientific Reports.

[8]  M. Du,et al.  Long noncoding RNAs in regulating adipogenesis: new RNAs shed lights on obesity , 2016, Cellular and Molecular Life Sciences.

[9]  M. Febbraio,et al.  IL-18 Production from the NLRP1 Inflammasome Prevents Obesity and Metabolic Syndrome. , 2016, Cell metabolism.

[10]  Jiandie D. Lin,et al.  Long Noncoding RNAs: A New Regulatory Code in Metabolic Control. , 2015, Trends in biochemical sciences.

[11]  Peng Chen,et al.  Regulatory networks of non-coding RNAs in brown/beige adipogenesis , 2015, Bioscience reports.

[12]  Yingying Ding,et al.  Socio-economic position as an intervention against overweight and obesity in children: a systematic review and meta-analysis , 2015, Scientific Reports.

[13]  Gongshe Yang,et al.  PU.1 antisense lncRNA against its mRNA translation promotes adipogenesis in porcine preadipocytes. , 2015, Animal genetics.

[14]  Yi Zhao,et al.  A liver-enriched long non-coding RNA, lncLSTR, regulates systemic lipid metabolism in mice. , 2015, Cell metabolism.

[15]  Pengfei Li,et al.  Long Non-Coding RNA NEAT1 Associates with SRp40 to Temporally Regulate PPARγ2 Splicing during Adipogenesis in 3T3-L1 Cells , 2014, Genes.

[16]  Davide Heller,et al.  STRING v10: protein–protein interaction networks, integrated over the tree of life , 2014, Nucleic Acids Res..

[17]  C. Zoccali,et al.  Pro- and anti-inflammatory cytokine gene expression in subcutaneous and visceral fat in severe obesity. , 2014, Nutrition, metabolism, and cardiovascular diseases : NMCD.

[18]  I. Chalmers,et al.  Israel–Gaza conflict – Authors' reply , 2014, The Lancet.

[19]  S. Legrand-Poels,et al.  Inflammation as a link between obesity, metabolic syndrome and type 2 diabetes. , 2014, Diabetes research and clinical practice.

[20]  Mario Aranda,et al.  Unsaturated fatty acids and insulin resistance in childhood obesity , 2014, Journal of pediatric endocrinology & metabolism : JPEM.

[21]  森 博子.  新着論文 要訳と解説 健康閉経前女性において,内臓脂肪は骨形成の低下および骨質劣化と関与している : a transiliac bone biopsy study , 2014 .

[22]  Y. Xiong,et al.  Acetylation stabilizes ATP-citrate lyase to promote lipid biosynthesis and tumor growth. , 2013, Molecular cell.

[23]  Binsheng Zhao,et al.  Abdominal fat is associated with lower bone formation and inferior bone quality in healthy premenopausal women: a transiliac bone biopsy study. , 2013, The Journal of clinical endocrinology and metabolism.

[24]  Howard Y. Chang,et al.  Long Noncoding RNAs: Cellular Address Codes in Development and Disease , 2013, Cell.

[25]  Huixia Li,et al.  Osteocalcin reverses endoplasmic reticulum stress and improves impaired insulin sensitivity secondary to diet-induced obesity through nuclear factor-κB signaling pathway. , 2013, Endocrinology.

[26]  H. Lodish,et al.  Regulation of mammalian cell differentiation by long non‐coding RNAs , 2012, EMBO reports.

[27]  S. Weng,et al.  Systematic review and meta-analyses of risk factors for childhood overweight identifiable during infancy , 2012, Archives of Disease in Childhood.

[28]  Xin Ma,et al.  LncRNAs Expression Signatures of Renal Clear Cell Carcinoma Revealed by Microarray , 2012, PloS one.

[29]  Howard Y. Chang,et al.  Genome regulation by long noncoding RNAs. , 2012, Annual review of biochemistry.

[30]  L. Lloyd,et al.  Childhood obesity and risk of the adult metabolic syndrome: a systematic review , 2011, International Journal of Obesity.

[31]  J. Clarke,et al.  What is a systematic review? , 2011, Evidence Based Nursing.

[32]  S. Hohmann.  UNICELLSYS - Understanding the cell's functional organization , 2010 .

[33]  D. Spector,et al.  Long noncoding RNAs: functional surprises from the RNA world. , 2009, Genes & development.

[34]  D. Granger,et al.  Adipose tissue: A motor for the inflammation associated with obesity , 2009, IUBMB life.

[35]  M. Deurenberg-Yap,et al.  Review on epidemic of obesity. , 2009, Annals of the Academy of Medicine, Singapore.

[36]  Brad T. Sherman,et al.  Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists , 2008, Nucleic acids research.

[37]  J. Wardle,et al.  Evidence for a strong genetic influence on childhood adiposity despite the force of the obesogenic environment. , 2008, The American journal of clinical nutrition.

[38]  K. Gunsalus,et al.  Network modeling links breast cancer susceptibility and centrosome dysfunction. , 2007, Nature genetics.

[39]  P. Khatri,et al.  A systems biology approach for pathway level analysis. , 2007, Genome research.

[40]  Jianzhi Zhang,et al.  Why Do Hubs Tend to Be Essential in Protein Networks? , 2006, PLoS genetics.

[41]  Gene Ontology Consortium,et al.  The Gene Ontology (GO) project in 2006 , 2005, Nucleic Acids Res..

[42]  C. Ji.  Report on childhood obesity in China (1)--body mass index reference for screening overweight and obesity in Chinese school-age children. , 2005, Biomedical and environmental sciences : BES.

[43]  Z. Oltvai,et al.  Network biology: understanding the cell's functional organization , 2004, Nature Reviews Genetics.

[44]  Brad T. Sherman,et al.  DAVID: Database for Annotation, Visualization, and Integrated Discovery , 2003, Genome Biology.

[45]  D. Freedman,et al.  Clustering of Coronary Heart Disease Risk Factors among Obese Children , 2002, Journal of pediatric endocrinology & metabolism : JPEM.

[46]  C. Baird.  The pilot study. , 2000, Orthopedic nursing.

[47]  W. Dietz.  Health consequences of obesity in youth: childhood predictors of adult disease. , 1998, Pediatrics.

[48]  R. Kurokawa,et al.  Long Noncoding RNAs , 2015, Springer Japan.

[49]  Yan Zhang,et al.  Inflammatory Markers and Risk of Type 2 Diabetes , 2012, Diabetes Care.

[50]  Brad T. Sherman,et al.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources , 2008, Nature Protocols.

[51]  E. Gehan,et al.  The properties of high-dimensional data spaces: implications for exploring gene and protein expression data , 2008, Nature Reviews Cancer.

[52]  Brad T. Sherman,et al.  DAVID: Database for Annotation, Visualization, and Integrated Discovery , 2003, Genome Biology.

[53]  ScienceDirect.  Nutrition, metabolism, and cardiovascular diseases : NMCD. , 1991 .

[54]  Supplementary Figures Supplementary Figure 1: Flow Charts Detailing the Different Interactome Mapping Strategies 1) Basic Serial 2) Pooling 3) Thresholding 4) Predictions Supplementary Tables , 2022 .