S-Nitrosylation links obesity-associated inflammation to endoplasmic reticulum dysfunction

S-nitrosylation links obesity and cell stress Obesity and other diseases are somehow linked to malfunction of the protein-protecting functions of the endoplasmic reticulum (ER). Yang et al. propose a mechanism by which obesity and associated chronic inflammation may be linked to the accumulation of unfolded proteins in the ER. Such stress would normally trigger the process known as the unfolded protein response (UPR). However, obese mice had increased S-nitrosylation of inositol-requiring protein-1 (IRE1α), a ribonuclease that regulates the UPR. The modified IRE1α had decreased RNAse activity. The authors expressed an IRE1α mutant protein that could not be nitrosylated in the liver of obese mice. This approach improved the UPR and helped restore glucose homeostasis. Science, this issue p. 500 Altered S-nitrosylation of a key protein involved in the unfolded protein response interferes with proteostasis in obesity. The association between inflammation and endoplasmic reticulum (ER) stress has been observed in many diseases. However, if and how chronic inflammation regulates the unfolded protein response (UPR) and alters ER homeostasis in general, or in the context of chronic disease, remains unknown. Here, we show that, in the setting of obesity, inflammatory input through increased inducible nitric oxide synthase (iNOS) activity causes S-nitrosylation of a key UPR regulator, IRE1α, which leads to a progressive decline in hepatic IRE1α-mediated XBP1 splicing activity in both genetic (ob/ob) and dietary (high-fat diet–induced) models of obesity. Finally, in obese mice with liver-specific IRE1α deficiency, reconstitution of IRE1α expression with a nitrosylation-resistant variant restored IRE1α-mediated XBP1 splicing and improved glucose homeostasis in vivo. Taken together, these data describe a mechanism by which inflammatory pathways compromise UPR function through iNOS-mediated S-nitrosylation of IRE1α, which contributes to defective IRE1α activity, impaired ER function, and prolonged ER stress in obesity.

[1]  I. Shimomura,et al.  Regulation of sterol regulatory element binding proteins in livers of fasted and refed mice. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[2]  S. Watkins,et al.  Identification of a Lipokine, a Lipid Hormone Linking Adipose Tissue to Systemic Metabolism , 2008, Cell.

[3]  C. Kahn,et al.  A regulatory subunit of phosphoinositide 3-kinase increases the nuclear accumulation of X-box–binding protein-1 to modulate the unfolded protein response , 2010, Nature Medicine.

[4]  A. Martínez-Ruíz,et al.  Signalling by NO-induced protein S-nitrosylation and S-glutathionylation: convergences and divergences. , 2007, Cardiovascular research.

[5]  R. Stroud,et al.  Structural and functional basis for RNA cleavage by Ire1 , 2011, BMC Biology.

[6]  Dustin J Maly,et al.  Allosteric Inhibition of the IRE1α RNase Preserves Cell Viability and Function during Endoplasmic Reticulum Stress , 2014, Cell.

[7]  Maruf M. U. Ali,et al.  Phosphoregulation of Ire1 RNase splicing activity , 2014, Nature Communications.

[8]  Dustin J Maly,et al.  Divergent allosteric control of the IRE1α endoribonuclease using kinase inhibitors , 2012, Nature chemical biology.

[9]  S. Tangye,et al.  Inflammatory Mechanisms in Obesity , 2013 .

[10]  Chao Zhang,et al.  The unfolded protein response signals through high-order assembly of Ire1 , 2009, Nature.

[11]  M. Karin,et al.  Hypothalamic IKKβ/NF-κB and ER Stress Link Overnutrition to Energy Imbalance and Obesity , 2008, Cell.

[12]  F. Urano,et al.  Coupling of stress in the ER to activation of JNK protein kinases by transmembrane protein kinase IRE1. , 2000, Science.

[13]  F. Sicheri,et al.  Flavonol activation defines an unanticipated ligand-binding site in the kinase-RNase domain of IRE1. , 2010, Molecular cell.

[14]  C. Hetz The unfolded protein response: controlling cell fate decisions under ER stress and beyond , 2012, Nature Reviews Molecular Cell Biology.

[15]  Xiaoping Yang,et al.  Chromium Alleviates Glucose Intolerance, Insulin Resistance, and Hepatic ER Stress in Obese Mice , 2008, Obesity.

[16]  J. Weissman,et al.  Regulated Ire1-dependent decay of messenger RNAs in mammalian cells , 2009, The Journal of cell biology.

[17]  T. N. Bhat,et al.  The Protein Data Bank , 2000, Nucleic Acids Res..

[18]  F. Martinon,et al.  BAX inhibitor-1 is a negative regulator of the ER stress sensor IRE1alpha. , 2009, Molecular cell.

[19]  Q. K. Timerghazin,et al.  Protein control of S-nitrosothiol reactivity: interplay of antagonistic resonance structures. , 2013, The journal of physical chemistry. B.

[20]  D. Mathis,et al.  Restoration of the Unfolded Protein Response in Pancreatic β Cells Protects Mice Against Type 1 Diabetes , 2013, Science Translational Medicine.

[21]  J. Donovan,et al.  Structure of Human RNase L Reveals the Basis for Regulated RNA Decay in the IFN Response , 2014, Science.

[22]  P. C. Wille,et al.  Unbiased identification of cysteine S-nitrosylation sites on proteins , 2007, Nature Protocols.

[23]  Yong Liu,et al.  PKA phosphorylation couples hepatic inositol-requiring enzyme 1α to glucagon signaling in glucose metabolism , 2011, Proceedings of the National Academy of Sciences.

[24]  L. Glimcher,et al.  Endoplasmic Reticulum Stress Links Obesity, Insulin Action, and Type 2 Diabetes , 2004, Science.

[25]  H. E. Marshall,et al.  Protein S-nitrosylation: purview and parameters , 2005, Nature Reviews Molecular Cell Biology.

[26]  T. Iwawaki,et al.  IRE1α Disruption Causes Histological Abnormality of Exocrine Tissues, Increase of Blood Glucose Level, and Decrease of Serum Immunoglobulin Level , 2010, PloS one.

[27]  Takashi Uehara,et al.  S-Nitrosylated protein-disulphide isomerase links protein misfolding to neurodegeneration , 2006, Nature.

[28]  N. Sonenberg,et al.  Double-Stranded RNA-Dependent Protein Kinase Links Pathogen Sensing with Stress and Metabolic Homeostasis , 2010, Cell.

[29]  Michael Karin,et al.  A central role for JNK in obesity and insulin resistance , 2002, Nature.

[30]  L. Glimcher,et al.  XBP-1 Regulates a Subset of Endoplasmic Reticulum Resident Chaperone Genes in the Unfolded Protein Response , 2003, Molecular and Cellular Biology.

[31]  A. Thompson,et al.  Multiple autophosphorylations significantly enhance the endoribonuclease activity of human inositol requiring enzyme 1α , 2014, BMC Biochemistry.

[32]  M. Montminy,et al.  The CREB Coactivator CRTC2 Links Hepatic ER Stress and Fasting Gluconeogenesis , 2009, Nature.

[33]  Peter Walter,et al.  The Transmembrane Kinase Ire1p Is a Site-Specific Endonuclease That Initiates mRNA Splicing in the Unfolded Protein Response , 1997, Cell.

[34]  Carey N Lumeng,et al.  Inflammatory links between obesity and metabolic disease. , 2011, The Journal of clinical investigation.

[35]  J. Tavernier,et al.  Getting RIDD of RNA: IRE1 in cell fate regulation. , 2014, Trends in biochemical sciences.

[36]  Solomon H. Snyder,et al.  The Biotin Switch Method for the Detection of S-Nitrosylated Proteins , 2001, Science's STKE.

[37]  G. Hotamisligil,et al.  Endoplasmic Reticulum Stress and the Inflammatory Basis of Metabolic Disease , 2010, Cell.

[38]  J. Ule,et al.  CLIP: construction of cDNA libraries for high-throughput sequencing from RNAs cross-linked to proteins in vivo. , 2009, Methods.

[39]  K. Ueki,et al.  The regulatory subunits of PI3K, p85α and p85β, interact with XBP-1 and increase its nuclear translocation , 2010, Nature Medicine.

[40]  A. Shah,et al.  Inducible nitric oxide synthase has divergent effects on vascular and metabolic function in obesity. , 2005, Diabetes.

[41]  F. Sicheri,et al.  Structure of the Dual Enzyme Ire1 Reveals the Basis for Catalysis and Regulation in Nonconventional RNA Splicing , 2008, Cell.

[42]  R. Parker,et al.  Treatment of diabetes and atherosclerosis by inhibiting fatty-acid-binding protein aP2 , 2007, Nature.

[43]  R. Cole,et al.  Identification and Quantification of S-Nitrosylation by Cysteine Reactive Tandem Mass Tag Switch Assay* , 2011, Molecular & Cellular Proteomics.

[44]  Tong Liu,et al.  A strategy for direct identification of protein S-nitrosylation sites by quadrupole time-of-flight mass spectrometry , 2008, Journal of the American Society for Mass Spectrometry.

[45]  M. Kaneki,et al.  Nitrosative stress and pathogenesis of insulin resistance. , 2006, Antioxidants & redox signaling.

[46]  Robert Clarke,et al.  Guidelines for the use and interpretation of assays for monitoring autophagy , 2012 .

[47]  Chao Zhang,et al.  IRE1 Signaling Affects Cell Fate During the Unfolded Protein Response , 2007, Science.

[48]  J. Carvalheira,et al.  S-nitrosation of the insulin receptor, insulin receptor substrate 1, and protein kinase B/Akt: a novel mechanism of insulin resistance. , 2005, Diabetes.

[49]  F. R. Papa,et al.  IRE1α Kinase Activation Modes Control Alternate Endoribonuclease Outputs to Determine Divergent Cell Fates , 2009, Cell.

[50]  Tzvi Aviv,et al.  The RNA-binding SAM domain of Smaug defines a new family of post-transcriptional regulators , 2003, Nature Structural Biology.

[51]  A. Marette,et al.  Targeted disruption of inducible nitric oxide synthase protects against obesity-linked insulin resistance in muscle , 2001, Nature Medicine.

[52]  S. Ryder,et al.  Quantitative approaches to monitor protein-nucleic acid interactions using fluorescent probes. , 2011, RNA.

[53]  P. Walter,et al.  Signal integration in the endoplasmic reticulum unfolded protein response , 2007, Nature Reviews Molecular Cell Biology.