The Glutaminase-Dependent System Confers Extreme Acid Resistance to New Species and Atypical Strains of Brucella

Neutralophilic bacteria have developed specific mechanisms to cope with the acid stress encountered in environments such as soil, fermented foods, and host compartments. In Escherichia coli, the glutamate decarboxylase (Gad)-dependent system is extremely efficient: it requires the concerted action of glutamate decarboxylase (GadA/GadB) and of the glutamate (Glu)/γ-aminobutyrate antiporter, GadC. Notably, this system is operative also in new strains/species of Brucella, among which Brucella microti, but not in the “classical” species, with the exception of marine mammals strains. Recently, the glutaminase-dependent system (named AR2_Q), relying on the deamination of glutamine (Gln) into Glu and on GadC activity, was described in E. coli. In Brucella genomes, a putative glutaminase (glsA)-coding gene is located downstream of the gadBC genes. We found that in B. microti these genes are expressed as a polycistronic transcript. Moreover, using a panel of Brucella genus-representative strains, we show that the AR2_Q system protects from extreme acid stress (pH ≤2.5), in the sole presence of Gln, only the Brucella species/strains predicted to have functional glsA and gadC. Indeed, mutagenesis approaches confirmed the involvement of glsA and gadC of B. microti in AR2_Q and that the acid-sensitive phenotype of B. abortus can be ascribed to a Ser248Leu substitution in GlsA, leading to loss of glutaminase activity. Furthermore, we found that the gene BMI_II339, of unknown function and downstream of the gadBC–glsA operon, positively affects Gad- and GlsA-dependent AR. Thus, we identified novel determinants that allow newly discovered and marine mammals Brucella strains to be better adapted to face hostile acidic environments. As for significance, this work may contribute to the understanding of the host preferences of Brucella species and opens the way to alternative diagnostic targets in epidemiological surveillance of brucellosis.

[1]  N. Thomson,et al.  Brucella neotomae Infection in Humans, Costa Rica , 2017, Emerging infectious diseases.

[2]  J. Foster,et al.  Brucella spp. of amphibians comprise genomically diverse motile strains competent for replication in macrophages and survival in mammalian hosts , 2017, Scientific Reports.

[3]  J. Blom,et al.  Isolation of a novel ‘atypical’ Brucella strain from a bluespotted ribbontail ray (Taeniura lymma) , 2016, Antonie van Leeuwenhoek.

[4]  T. Ficht,et al.  A Brucella spp. Isolate from a Pac-Man Frog (Ceratophrys ornata) Reveals Characteristics Departing from Classical Brucellae , 2016, Front. Cell. Infect. Microbiol..

[5]  J. Blom,et al.  Brucella vulpis sp. nov., isolated from mandibular lymph nodes of red foxes (Vulpes vulpes). , 2016, International journal of systematic and evolutionary microbiology.

[6]  J. Foster,et al.  First isolation and characterization of Brucella microti from wild boar , 2015, BMC Veterinary Research.

[7]  D. De Biase,et al.  Biochemical and spectroscopic properties of Brucella microti glutamate decarboxylase, a key component of the glutamate-dependent acid resistance system , 2015, FEBS open bio.

[8]  Gilles Vergnaud,et al.  Brucella papionis sp. nov., isolated from baboons (Papio spp.). , 2014, International journal of systematic and evolutionary microbiology.

[9]  D. De Biase,et al.  Glutamate Decarboxylase-Dependent Acid Resistance in Brucella spp.: Distribution and Contribution to Fitness under Extremely Acidic Conditions , 2014, Applied and Environmental Microbiology.

[10]  P. Lund,et al.  Coping with low pH: molecular strategies in neutralophilic bacteria. , 2014, FEMS microbiology reviews.

[11]  M. Su,et al.  Glutamine, glutamate, and arginine-based acid resistance in Lactobacillus reuteri. , 2014, Food microbiology.

[12]  Yufei Wang,et al.  Impact of Hfq on Global Gene Expression and Intracellular Survival in Brucella melitensis , 2013, PloS one.

[13]  S. Köhler,et al.  Global Rsh-dependent transcription profile of Brucella suis during stringent response unravels adaptation to nutrient starvation and cross-talk with other stress responses , 2013, BMC Genomics.

[14]  Didier Raoult,et al.  Postgenomic analysis of bacterial pathogens repertoire reveals genome reduction rather than virulence factors. , 2013, Briefings in functional genomics.

[15]  Peilong Lu,et al.  L-glutamine provides acid resistance for Escherichia coli through enzymatic release of ammonia , 2013, Cell Research.

[16]  R. Roop,et al.  Diverse Genetic Regulon of the Virulence-Associated Transcriptional Regulator MucR in Brucella abortus 2308 , 2013, Infection and Immunity.

[17]  D. De Biase,et al.  The glutamic acid decarboxylase system of the new species Brucella microti contributes to its acid resistance and to oral infection of mice. , 2012, The Journal of infectious diseases.

[18]  E. Pennacchietti,et al.  Glutamate decarboxylase‐dependent acid resistance in orally acquired bacteria: function, distribution and biomedical implications of the gadBC operon , 2012, Molecular microbiology.

[19]  Y. Eguchi,et al.  The connector SafA interacts with the multi‐sensing domain of PhoQ in Escherichia coli , 2012, Molecular microbiology.

[20]  F. Aujoulat,et al.  From Environment to Man: Genome Evolution and Adaptation of Human Opportunistic Bacterial Pathogens , 2012, Genes.

[21]  M. Su,et al.  Contribution of glutamate decarboxylase in Lactobacillus reuteri to acid resistance and persistence in sourdough fermentation , 2011, Microbial cell factories.

[22]  D. Andrews,et al.  Bacterial Transmembrane Proteins that Lack N-Terminal Signal Sequences , 2011, PloS one.

[23]  S. Köhler,et al.  The virB operon is essential for lethality of Brucella microti in the Balb/c murine model of infection. , 2011, The Journal of infectious diseases.

[24]  B. Appel,et al.  Survival of Brucella spp. in mineral water, milk and yogurt. , 2011, International journal of food microbiology.

[25]  J. Setubal,et al.  Characterization of Novel Brucella Strains Originating from Wild Native Rodent Species in North Queensland, Australia , 2010, Applied and Environmental Microbiology.

[26]  V. Lafont,et al.  The new species Brucella microti replicates in macrophages and causes death in murine models of infection. , 2010, The Journal of infectious diseases.

[27]  G. Vergnaud,et al.  Brucella inopinata sp. nov., isolated from a breast implant infection. , 2010, International journal of systematic and evolutionary microbiology.

[28]  S. Dandekar,et al.  Establishment of Systemic Brucella melitensis Infection through the Digestive Tract Requires Urease, the Type IV Secretion System, and Lipopolysaccharide O Antigen , 2009, Infection and Immunity.

[29]  P. Le Flèche,et al.  Isolation of Brucella microti from mandibular lymph nodes of red foxes, Vulpes vulpes, in lower Austria. , 2009, Vector borne and zoonotic diseases.

[30]  E. Groisman,et al.  Signal integration in bacterial two-component regulatory systems. , 2008, Genes & development.

[31]  A. Joachimiak,et al.  Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis. , 2008, Biochemistry.

[32]  Z. Hubálek,et al.  Brucella microti sp. nov., isolated from the common vole Microtus arvalis. , 2008, International journal of systematic and evolutionary microbiology.

[33]  G. Schurig,et al.  Brucella suis urease encoded by ure1 but not ure2 is necessary for intestinal infection of BALB/c mice , 2007, BMC Microbiology.

[34]  L. Pease,et al.  Gene splicing and mutagenesis by PCR-driven overlap extension , 2007, Nature Protocols.

[35]  F. Sangari,et al.  Characterization of the Urease Operon of Brucella abortus and Assessment of Its Role in Virulence of the Bacterium , 2006, Infection and Immunity.

[36]  J. Letesson,et al.  The stringent response mediator Rsh is required for Brucella melitensis and Brucella suis virulence, and for expression of the type IV secretion system virB , 2006, Cellular microbiology.

[37]  Georgios Pappas,et al.  The new global map of human brucellosis. , 2006, The Lancet. Infectious diseases.

[38]  M. Winkler,et al.  Role of HdeA in acid resistance and virulence in Brucella abortus 2308. , 2005, Veterinary microbiology.

[39]  John W. Foster,et al.  Escherichia coli Glutamate- and Arginine-Dependent Acid Resistance Systems Increase Internal pH and Reverse Transmembrane Potential , 2004, Journal of bacteriology.

[40]  A. Bollen,et al.  Human Neurobrucellosis with Intracerebral Granuloma Caused by a Marine Mammal Brucella spp. , 2003, Emerging infectious diseases.

[41]  K. Gajiwala,et al.  HDEA, a periplasmic protein that supports acid resistance in pathogenic enteric bacteria. , 2000, Journal of molecular biology.

[42]  J. Liautard,et al.  Early Acidification of Phagosomes ContainingBrucella suis Is Essential for Intracellular Survival in Murine Macrophages , 1999, Infection and Immunity.

[43]  G. Young,et al.  A bifunctional urease enhances survival of pathogenic Yersinia enterocolitica and Morganella morganii at low pH , 1996, Journal of bacteriology.

[44]  T. Blundell,et al.  Comparative protein modelling by satisfaction of spatial restraints. , 1993, Journal of molecular biology.

[45]  B. Marshall,et al.  Urea protects Helicobacter (Campylobacter) pylori from the bactericidal effect of acid. , 1990, Gastroenterology.

[46]  E. Shaw,et al.  A Comparison of the Morphologic, Cultural and Biochemical Characteristics of B. Abortus and B. Melitensis* Studies on the Genus Brucella Nov. Gen. I , 1920 .

[47]  G. Escobar,et al.  Recent trends in human Brucella canis infection. , 2013, Comparative immunology, microbiology and infectious diseases.

[48]  M. Glickman,et al.  An improved counterselectable marker system for mycobacterial recombination using galK and 2-deoxy-galactose. , 2011, Gene.