A metagenomic survey identifies Tamdy orthonairovirus as well as divergent phlebo-, rhabdo-, chu- and flavi-like viruses in Anatolia, Turkey.
暂无分享,去创建一个
E. Dinçer | A. Nitsche | A. Brinkmann | K. Ergünay | K. Földes | O. Hekimoğlu | A. Özkul | İ. Öktem | Ceylan Polat | S. Hacıoğlu | O. Hekimoglu | I. Öktem
[1] T. N. Morozova,et al. Complete Genome Coding Sequences of Artashat, Burana, Caspiy, Chim, Geran, Tamdy, and Uzun-Agach Viruses (Bunyavirales: Nairoviridae: Orthonairovirus) , 2017, Genome Announcements.
[2] E. Dinçer,et al. Generic amplification and next generation sequencing reveal Crimean-Congo hemorrhagic fever virus AP92-like strain and distinct tick phleboviruses in Anatolia, Turkey , 2017, Parasites & Vectors.
[3] H. Isawa,et al. Detection of a novel putative phlebovirus and first isolation of Dugbe virus from ticks in Accra, Ghana. , 2017, Ticks and tick-borne diseases.
[4] R. L. Harrison,et al. Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018) , 2017, Archives of Virology.
[5] A. Papa,et al. Novel phleboviruses detected in ticks, Greece. , 2016, Ticks and tick-borne diseases.
[6] Daniel H. Huson,et al. MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data , 2016, PLoS Comput. Biol..
[7] H. Guzmán,et al. A Global Genomic Characterization of Nairoviruses Identifies Nine Discrete Genogroups with Distinctive Structural Characteristics and Host-Vector Associations , 2016, The American journal of tropical medicine and hygiene.
[8] R. Ozaras,et al. Crimean-Congo hemorrhagic fever in Turkey: Current status and future challenges. , 2016, Antiviral research.
[9] A. Brault,et al. Molecular, serological and in vitro culture-based characterization of Bourbon virus, a newly described human pathogen of the genus Thogotovirus. , 2015, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.
[10] Nikos Vasilakis,et al. Divergent Viruses Discovered in Arthropods and Vertebrates Revise the Evolutionary History of the Flaviviridae and Related Viruses , 2015, Journal of Virology.
[11] D. Raoult,et al. How a multidisciplinary 'One Health' approach can combat the tick-borne pathogen threat in Europe. , 2015, Future microbiology.
[12] Changqing Zeng,et al. Metagenomic Profile of the Viral Communities in Rhipicephalus spp. Ticks from Yunnan, China , 2015, PloS one.
[13] Xue-Jie Yu,et al. Severe fever with thrombocytopenia syndrome and its pathogen SFTSV. , 2015, Microbes and infection.
[14] M. Shi,et al. Unprecedented genomic diversity of RNA viruses in arthropods reveals the ancestry of negative-sense RNA viruses , 2015, eLife.
[15] Narmada Thanki,et al. CDD: NCBI's conserved domain database , 2014, Nucleic Acids Res..
[16] Chao Xie,et al. Fast and sensitive protein alignment using DIAMOND , 2014, Nature Methods.
[17] M. Sanchez Leon,et al. Virome Analysis of Amblyomma americanum, Dermacentor variabilis, and Ixodes scapularis Ticks Reveals Novel Highly Divergent Vertebrate and Invertebrate Viruses , 2014, Journal of Virology.
[18] Björn Usadel,et al. Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..
[19] M. Baron,et al. The molecular biology of nairoviruses, an emerging group of tick-borne arboviruses , 2013, Archives of Virology.
[20] Koichiro Tamura,et al. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. , 2013, Molecular biology and evolution.
[21] R. Tesh,et al. Characterization of the Bhanja Serogroup Viruses (Bunyaviridae): a Novel Species of the Genus Phlebovirus and Its Relationship with Other Emerging Tick-Borne Phleboviruses , 2013, Journal of Virology.
[22] H. Guzmán,et al. Characterization of the Uukuniemi Virus Group (Phlebovirus: Bunyaviridae): Evidence for Seven Distinct Species , 2013, Journal of Virology.
[23] S. Randolph,et al. Drivers, dynamics, and control of emerging vector-borne zoonotic diseases , 2012, The Lancet.
[24] D. Otranto,et al. Ticks and tick-borne diseases: a One Health perspective. , 2012, Trends in parasitology.
[25] A. MacNeil,et al. A new phlebovirus associated with severe febrile illness in Missouri. , 2012, The New England journal of medicine.
[26] Jonathan E. Suk,et al. Monitoring EU Emerging Infectious Disease Risk Due to Climate Change , 2012, Science.
[27] Z. Hubálek,et al. Tick-borne viruses in Europe , 2012, Parasitology Research.
[28] Steven L Salzberg,et al. Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.
[29] A. Ozkul,et al. Current status of human arboviral diseases in Turkey. , 2011, Vector borne and zoonotic diseases.
[30] I. Horak,et al. The genus Hyalomma Koch, 1844: v. re-evaluation of the taxonomic rank of taxa comprising the H. (Euhyalomma) marginatum koch complex of species (Acari: Ixodidae) with redescription of all parasitic stages and notes on biology , 2008 .
[31] L. Aydın,et al. Geographical distribution of ticks in Turkey , 2007, Parasitology Research.
[32] E. Holmes,et al. Phylogenetic relationships among rhabdoviruses inferred using the L polymerase gene. , 2005, The Journal of general virology.
[33] L. Holm,et al. The Pfam protein families database , 2005, Nucleic Acids Res..
[34] T. V. Frolova,et al. Tick-borne virus diseases of human interest in Europe. , 2004, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
[35] H. Klompen. The Genus Rhipicephalus (Acari, Ixodidae). A Guide to the Brown Ticks of the World, , 2000 .
[36] J. Thompson,et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.
[37] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[38] Aristova Va,et al. [Isolation of Tamdy virus (Bunyaviridae) pathogenic for man from natural sources in Central Asia, Kazakhstan and Transcaucasia]. , 1984 .
[39] M. L. Vieira,et al. Multiple Phlebovirus (Bunyaviridae) genetic groups detected in Rhipicephalus, Hyalomma and Dermacentor ticks from southern Portugal. , 2017, Ticks and tick-borne diseases.
[40] A. Papa,et al. Novel phlebovirus detected in Haemaphysalis parva ticks in a Greek island. , 2017, Ticks and tick-borne diseases.
[41] Alexander E Gorbalenya,et al. Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2017) , 2017, Archives of Virology.
[42] Aleksanian IuT,et al. The species composition of mosquitoes and ticks in Armenia , 2006 .
[43] Iu T Aleksanian,et al. [The species composition of mosquitoes and ticks in Armenia]. , 2006, Meditsinskaia parazitologiia i parazitarnye bolezni.
[44] D. K. Lvov,et al. Virus “Tamdy” — A new arbovirus, isolated in the Uzbec S.S.R. and Turkmen S.S.R. from ticksHyalomma asiaticum asiaticum Schulce et Schlottke, 1929, andHyalomma plumbeum plumbeum Panzer, 1796 , 2005, Archives of Virology.
[45] A. Estrada-Peña,et al. Ticks of domestic animals in Africa: a guide to identification of species , 2003 .
[46] Sean R. Eddy,et al. The Pfam Protein Families Database , 2002, Nucleic Acids Res..
[47] T. A. Hall,et al. BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT , 1999 .
[48] N. Filippova. Fauna of Russia and neighbouring countries. Ixodid ticks of subfamily Amblyomminae. , 1997 .
[49] V. L. Gromashevskiĭ,et al. [Isolation of Tamdy virus (Bunyaviridae) pathogenic for man from natural sources in Central Asia, Kazakhstan and Transcaucasia]. , 1984, Voprosy virusologii.