Analysis methods for measuring passive auditory fNIRS responses generated by a block-design paradigm

Abstract. Significance: Functional near-infrared spectroscopy (fNIRS) is an increasingly popular tool in auditory research, but the range of analysis procedures employed across studies may complicate the interpretation of data. Aim: We aim to assess the impact of different analysis procedures on the morphology, detection, and lateralization of auditory responses in fNIRS. Specifically, we determine whether averaging or generalized linear model (GLM)-based analysis generates different experimental conclusions when applied to a block-protocol design. The impact of parameter selection of GLMs on detecting auditory-evoked responses was also quantified. Approach: 17 listeners were exposed to three commonly employed auditory stimuli: noise, speech, and silence. A block design, comprising sounds of 5 s duration and 10 to 20 s silent intervals, was employed. Results: Both analysis procedures generated similar response morphologies and amplitude estimates, and both indicated that responses to speech were significantly greater than to noise or silence. Neither approach indicated a significant effect of brain hemisphere on responses to speech. Methods to correct for systemic hemodynamic responses using short channels improved detection at the individual level. Conclusions: Consistent with theoretical considerations, simulations, and other experimental domains, GLM and averaging analyses generate the same group-level experimental conclusions. We release this dataset publicly for use in future development and optimization of algorithms.

[1]  Carlos M. Gómez,et al.  Multivariate analysis of the systemic response to auditory stimulation: An integrative approach , 2021, Experimental physiology.

[2]  Alessandro Torricelli,et al.  Best practices for fNIRS publications , 2021, Neurophotonics.

[3]  S. Nahavandi,et al.  Objective measurement of tinnitus using functional near-infrared spectroscopy and machine learning , 2020, PloS one.

[4]  Antje Ihlefeld,et al.  Hemodynamic Responses Link Individual Differences in Informational Masking to the Vicinity of Superior Temporal Gyrus , 2020, bioRxiv.

[5]  P. Kitterick,et al.  The Benefit of Cross-Modal Reorganization on Speech Perception in Pediatric Cochlear Implant Recipients Revealed Using Functional Near-Infrared Spectroscopy , 2020, Frontiers in Human Neuroscience.

[6]  Maureen J. Shader,et al.  Impact of Aging and the Electrode-to-Neural Interface on Temporal Processing Ability in Cochlear-Implant Users: Amplitude-Modulation Detection Thresholds , 2020, Trends in hearing.

[7]  Martin Wolf,et al.  Short-channel regression in functional near-infrared spectroscopy is more effective when considering heterogeneous scalp hemodynamics , 2020, Neurophotonics.

[8]  Xuetong Zhai,et al.  Quantitative comparison of correction techniques for removing systemic physiological signal in functional near-infrared spectroscopy studies , 2020, Neurophotonics.

[9]  J. Furman,et al.  Changes in Cortical Activation During Dual-Task Walking in Individuals With and Without Visual Vertigo , 2020, Journal of neurologic physical therapy : JNPT.

[10]  H. Innes-Brown,et al.  Cortical fNIRS Responses Can Be Better Explained by Loudness Percept than Sound Intensity , 2020, Ear and hearing.

[11]  M. Pichora-Fuller,et al.  Functional Near-Infrared Spectroscopy as a Measure of Listening Effort in Older Adults Who Use Hearing Aids , 2019, Trends in hearing.

[12]  Astrid van Wieringen,et al.  Neural Modulation Transmission Is a Marker for Speech Perception in Noise in Cochlear Implant Users , 2019, Ear and hearing.

[13]  P. Kitterick,et al.  Evaluating time-reversed speech and signal-correlated noise as auditory baselines for isolating speech-specific processing using fNIRS , 2019, PLoS ONE.

[14]  P. Kitterick,et al.  Pre-operative Brain Imaging Using Functional Near-Infrared Spectroscopy Helps Predict Cochlear Implant Outcome in Deaf Adults , 2019, Journal of the Association for Research in Otolaryngology.

[15]  John P. Spencer,et al.  A fNIRS Investigation of Speech Planning and Execution in Adults Who Stutter , 2019, Neuroscience.

[16]  Xuetong Zhai,et al.  Investigation of the sensitivity-specificity of canonical- and deconvolution-based linear models in evoked functional near-infrared spectroscopy , 2019, Neurophotonics.

[17]  Dinesh K. Sivakolundu,et al.  BOLD hemodynamic response function changes significantly with healthy aging , 2019, NeuroImage.

[18]  H. Innes-Brown,et al.  Assessing hearing by measuring heartbeat: The effect of sound level , 2019, PloS one.

[19]  Chandan J. Vaidya,et al.  Temporal Derivative Distribution Repair (TDDR): A motion correction method for fNIRS , 2019, NeuroImage.

[20]  J. Davies-Thompson,et al.  Cortical correlates of speech intelligibility measured using functional near-infrared spectroscopy (fNIRS) , 2018, Hearing Research.

[21]  D. Hartley,et al.  Listening in Naturalistic Scenes: What Can Functional Near-Infrared Spectroscopy and Intersubject Correlation Analysis Tell Us About the Underlying Brain Activity? , 2018, Trends in hearing.

[22]  Xiao-Su Hu,et al.  Human central auditory plasticity: A review of functional near‐infrared spectroscopy (fNIRS) to measure cochlear implant performance and tinnitus perception , 2018, Laryngoscope investigative otolaryngology.

[23]  Antje Ihlefeld,et al.  Spatial Release From Informational Masking: Evidence From Functional Near Infrared Spectroscopy , 2018, bioRxiv.

[24]  Xuetong Zhai,et al.  The NIRS Brain AnalyzIR Toolbox , 2018, Algorithms.

[25]  Hamish Innes-Brown,et al.  Cortical Processing Related to Intensity of a Modulated Noise Stimulus—a Functional Near-Infrared Study , 2018, Journal of the Association for Research in Otolaryngology.

[26]  João Ricardo Sato,et al.  fNIRS Optodes’ Location Decider (fOLD): a toolbox for probe arrangement guided by brain regions-of-interest , 2018, Scientific Reports.

[27]  Meryem A Yücel,et al.  Functional Near Infrared Spectroscopy: Enabling Routine Functional Brain Imaging. , 2017, Current opinion in biomedical engineering.

[28]  P. Kitterick,et al.  Adaptive benefit of cross-modal plasticity following cochlear implantation in deaf adults , 2017, Proceedings of the National Academy of Sciences.

[29]  D. Hartley,et al.  Brain activity underlying the recovery of meaning from degraded speech: A functional near-infrared spectroscopy (fNIRS) study , 2017, Hearing Research.

[30]  Jan Wouters,et al.  Source analysis of auditory steady-state responses in acoustic and electric hearing , 2017, NeuroImage.

[31]  Jaime A. Undurraga,et al.  Neural Representation of Interaural Time Differences in Humans—an Objective Measure that Matches Behavioural Performance , 2016, Journal of the Association for Research in Otolaryngology.

[32]  P. Kitterick,et al.  Speech-evoked activation in adult temporal cortex measured using functional near-infrared spectroscopy (fNIRS): Are the measurements reliable? , 2016, Hearing Research.

[33]  Satrajit S. Ghosh,et al.  The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments , 2016, Scientific Data.

[34]  D. Hartley,et al.  Shining a light on the neural signature of effortful listening , 2016 .

[35]  Ilias Tachtsidis,et al.  False positives and false negatives in functional near-infrared spectroscopy: issues, challenges, and the way forward , 2016, Neurophotonics.

[36]  Theodore J Huppert,et al.  Commentary on the statistical properties of noise and its implication on general linear models in functional near-infrared spectroscopy. , 2016, Neurophotonics.

[37]  Andrea Bergmann,et al.  Statistical Parametric Mapping The Analysis Of Functional Brain Images , 2016 .

[38]  Jan Wouters,et al.  Assessing temporal modulation sensitivity using electrically evoked auditory steady state responses , 2015, Hearing Research.

[39]  D. Hartley,et al.  A Synchrony-Dependent Influence of Sounds on Activity in Visual Cortex Measured Using Functional Near-Infrared Spectroscopy (fNIRS) , 2015, PloS one.

[40]  F. Scholkmann,et al.  Measuring tissue hemodynamics and oxygenation by continuous-wave functional near-infrared spectroscopy—how robust are the different calculation methods against movement artifacts? , 2014, Physiological measurement.

[41]  M. Beauchamp,et al.  Auditory cortex activation to natural speech and simulated cochlear implant speech measured with functional near-infrared spectroscopy , 2014, Hearing Research.

[42]  Michael Eickenberg,et al.  Machine learning for neuroimaging with scikit-learn , 2014, Front. Neuroinform..

[43]  Martin Luessi,et al.  MNE software for processing MEG and EEG data , 2014, NeuroImage.

[44]  Sungho Tak,et al.  Statistical analysis of fNIRS data: A comprehensive review , 2014, NeuroImage.

[45]  Martin Luessi,et al.  MEG and EEG data analysis with MNE-Python , 2013, Front. Neuroinform..

[46]  Fan Wang,et al.  A Circuit for Motor Cortical Modulation of Auditory Cortical Activity , 2013, The Journal of Neuroscience.

[47]  Adam A. Hersbach,et al.  An Adaptive Australian Sentence Test in Noise (AuSTIN) , 2013, Ear and hearing.

[48]  Ardalan Aarabi,et al.  Autoregressive model based algorithm for correcting motion and serially correlated errors in fNIRS. , 2013, Biomedical optics express.

[49]  M. Ben-Shachar,et al.  Do not throw out the baby with the bath water: choosing an effective baseline for a functional localizer of speech processing , 2013, Brain and behavior.

[50]  D. Poeppel The maps problem and the mapping problem: Two challenges for a cognitive neuroscience of speech and language , 2012, Cognitive neuropsychology.

[51]  Gary H. Glover,et al.  A quantitative comparison of NIRS and fMRI across multiple cognitive tasks , 2011, NeuroImage.

[52]  M. Beauchamp,et al.  Neuroimaging with near-infrared spectroscopy demonstrates speech-evoked activity in the auditory cortex of deaf children following cochlear implantation , 2010, Hearing Research.

[53]  Xu Cui,et al.  Functional near infrared spectroscopy (NIRS) signal improvement based on negative correlation between oxygenated and deoxygenated hemoglobin dynamics , 2010, NeuroImage.

[54]  W. K. Simmons,et al.  Circular analysis in systems neuroscience: the dangers of double dipping , 2009, Nature Neuroscience.

[55]  J. Mehler,et al.  The neonate brain detects speech structure , 2008, Proceedings of the National Academy of Sciences.

[56]  G. Barker,et al.  Study design in fMRI: Basic principles , 2006, Brain and Cognition.

[57]  R. Saager,et al.  Direct characterization and removal of interfering absorption trends in two-layer turbid media. , 2005, Journal of the Optical Society of America. A, Optics, image science, and vision.

[58]  L. Shuster,et al.  An fMRI investigation of covertly and overtly produced mono- and multisyllabic words , 2005, Brain and Language.

[59]  J. Connolly,et al.  Universal Newborn Hearing Screening: Are We Achieving the Joint Committee on Infant Hearing (JCIH) Objectives? , 2005, The Laryngoscope.

[60]  Kyung K Peck,et al.  Comparison of hemodynamic response nonlinearity across primary cortical areas , 2004, NeuroImage.

[61]  Jan Wouters,et al.  Objective assessment of frequency-specific hearing thresholds in babies. , 2004, International journal of pediatric otorhinolaryngology.

[62]  S. Fantini,et al.  Optical measurements of absorption changes in two-layered diffusive media. , 2004, Physics in medicine and biology.

[63]  David A. Boas,et al.  Factors affecting the accuracy of near-infrared spectroscopy concentration calculations for focal changes in oxygenation parameters , 2003, NeuroImage.

[64]  Karl J. Friston,et al.  Comparing event-related and epoch analysis in blocked design fMRI , 2003, NeuroImage.

[65]  Peter A. Bandettini,et al.  Detection versus Estimation in Event-Related fMRI: Choosing the Optimal Stimulus Timing , 2002, NeuroImage.

[66]  C. Clemens,et al.  The False-Positive in Universal Newborn Hearing Screening , 2000, Pediatrics.

[67]  J. Brockway Two functional magnetic resonance imaging f(MRI) tasks that may replace the gold standard, Wada testing, for language lateralization while giving additional localization information. , 2000, Brain and cognition.

[68]  Karl J. Friston,et al.  Stochastic Designs in Event-Related fMRI , 1999, NeuroImage.

[69]  G. Glover Deconvolution of Impulse Response in Event-Related BOLD fMRI1 , 1999, NeuroImage.

[70]  Mark S. Cohen,et al.  Parametric Analysis of fMRI Data Using Linear Systems Methods , 1997, NeuroImage.

[71]  S. Rombouts,et al.  Test-retest analysis with functional MR of the activated area in the human visual cortex. , 1997, AJNR. American journal of neuroradiology.

[72]  A. Dale,et al.  Selective averaging of rapidly presented individual trials using fMRI , 1997, Human brain mapping.

[73]  Terence W. Picton,et al.  Frequency‐Specific Audiometry Using Steady‐State Responses , 1996, Ear and hearing.

[74]  Y. Sininger,et al.  Auditory Brain Stem Response for Objective Measures of Hearing , 1993, Ear and hearing.

[75]  G. Dawson A summation technique for the detection of small evoked potentials. , 1954, Electroencephalography and clinical neurophysiology.