How to evaluate innovation ability objectively and scientifically of high level innovative technical personnel is of great significance for an area to draw up scientific and technical policy and originality innovation strategy. By literature review method, analytic hierarchy process and expert scoring method, throuh the basis on analyzing a variety of factors which impact on innovation ability of local high level technical personnel, after two rounds of expert consultation, three level evaluation index system has been established, which includes sixteen two-level indexes and thirty five three-level indexes. The corresponding weighting coefficients and the main observation point are provided by every index. For example postgraduates graduating in 2013 from an university in Hebei province, output and effect evaluation of index system are investigated from performance appraisal, which proved that this index system is scientific and feasible.