The Variable Internal Structure of the Mycoplasma penetrans Attachment Organelle Revealed by Biochemical and Microscopic Analyses: Implications for Attachment Organelle Mechanism and Evolution

ABSTRACT Although mycoplasmas have small genomes, many of them, including the HIV-associated opportunist Mycoplasma penetrans, construct a polar attachment organelle (AO) that is used for both adherence to host cells and gliding motility. However, the irregular phylogenetic distribution of similar structures within the mycoplasmas, as well as compositional and ultrastructural differences among these AOs, suggests that AOs have arisen several times through convergent evolution. We investigated the ultrastructure and protein composition of the cytoskeleton-like material of the M. penetrans AO with several forms of microscopy and biochemical analysis, to determine whether the M. penetrans AO was constructed at the molecular level on principles similar to those of other mycoplasmas, such as Mycoplasma pneumoniae and Mycoplasma mobile. We found that the M. penetrans AO interior was generally dissimilar from that of other mycoplasmas, in that it exhibited considerable heterogeneity in size and shape, suggesting a gel-like nature. In contrast, several of the 12 potential protein components identified by mass spectrometry of M. penetrans detergent-insoluble proteins shared certain distinctive biochemical characteristics with M. pneumoniae AO proteins, although not with M. mobile proteins. We conclude that convergence between M. penetrans and M. pneumoniae AOs extends to the molecular level, leading to the possibility that the less organized material in both M. pneumoniae and M. penetrans is the substance principally responsible for the organization and function of the AO. IMPORTANCE Mycoplasma penetrans is a bacterium that infects HIV-positive patients and may contribute to the progression of AIDS. It attaches to host cells through a structure called an AO, but it is not clear how it builds this structure. Our research is significant not only because it identifies the novel protein components that make up the material within the AO that give it its structure but also because we find that the M. penetrans AO is organized unlike AOs from other mycoplasmas, suggesting that similar structures have evolved multiple times. From this work, we derive some basic principles by which mycoplasmas, and potentially all organisms, build structures at the subcellular level.

[1]  K. Namba,et al.  Periodicity in Attachment Organelle Revealed by Electron Cryotomography Suggests Conformational Changes in Gliding Mechanism of Mycoplasma pneumoniae , 2016, mBio.

[2]  E. Querol,et al.  A minimized motile machinery for Mycoplasma genitalium , 2016, Molecular microbiology.

[3]  D. Nakane,et al.  Systematic Structural Analyses of Attachment Organelle in Mycoplasma pneumoniae , 2015, PLoS pathogens.

[4]  E. Tulman,et al.  Global Changes in Mycoplasma gallisepticum Phase-Variable Lipoprotein Gene vlhA Expression during In Vivo Infection of the Natural Chicken Host , 2015, Infection and Immunity.

[5]  Melanie Pfeiffer,et al.  Subunits of the Pyruvate Dehydrogenase Cluster of Mycoplasma pneumoniae Are Surface-Displayed Proteins that Bind and Activate Human Plasminogen , 2015, PloS one.

[6]  E. Querol,et al.  A novel sigma factor reveals a unique regulon controlling cell-specific recombination in Mycoplasma genitalium , 2015, Nucleic acids research.

[7]  Hongbaek Cho The role of cytoskeletal elements in shaping bacterial cells. , 2015, Journal of microbiology and biotechnology.

[8]  Mitchell F. Balish,et al.  Mycoplasma iowae: relationships among oxygen, virulence, and protection from oxidative stress , 2015, Veterinary Research.

[9]  Mitchell F. Balish,et al.  Mycoplasma pneumoniae, an Underutilized Model for Bacterial Cell Biology , 2014, Journal of bacteriology.

[10]  Mitchell F. Balish,et al.  Reduction of Hydrogen Peroxide Accumulation and Toxicity by a Catalase from Mycoplasma iowae , 2014, PloS one.

[11]  M. Thanbichler,et al.  Nucleotide‐independent cytoskeletal scaffolds in bacteria , 2013, Cytoskeleton.

[12]  B. Tjaden,et al.  Computational analysis of bacterial RNA-Seq data , 2013, Nucleic acids research.

[13]  G. Jensen,et al.  The bacterial cytoskeleton: more than twisted filaments. , 2013, Current opinion in cell biology.

[14]  Dominika A. Jurkovic,et al.  Conserved Terminal Organelle Morphology and Function in Mycoplasma penetrans and Mycoplasma iowae , 2012, Journal of bacteriology.

[15]  D. C. Krause,et al.  Loss of co‐chaperone TopJ impacts adhesin P1 presentation and terminal organelle maturation in Mycoplasma pneumoniae , 2011, Molecular microbiology.

[16]  C. Dorman Regulation of transcription by DNA supercoiling in Mycoplasma genitalium: global control in the smallest known self‐replicating genome , 2011, Molecular microbiology.

[17]  E. Hoiczyk,et al.  BacM, an N‐terminally processed bactofilin of Myxococcus xanthus, is crucial for proper cell shape , 2011, Molecular microbiology.

[18]  Shinobu Satoh [Protein kinase C activation]. , 2010, Nihon rinsho. Japanese journal of clinical medicine.

[19]  M. Miyata Unique centipede mechanism of Mycoplasma gliding. , 2010, Annual review of microbiology.

[20]  Ariane Briegel,et al.  Bactofilins, a ubiquitous class of cytoskeletal proteins mediating polar localization of a cell wall synthase in Caulobacter crescentus , 2010, The EMBO journal.

[21]  M. Suyama,et al.  Transcriptome Complexity in a Genome-Reduced Bacterium , 2009, Science.

[22]  W. Margolin,et al.  Sculpting the Bacterial Cell , 2009, Current Biology.

[23]  Mitchell F. Balish,et al.  Mycoplasma pneumoniae Cytoskeletal Protein HMW2 and the Architecture of the Terminal Organelle , 2009, Journal of bacteriology.

[24]  Christian Suloway,et al.  Fully automated, sequential tilt-series acquisition with Leginon. , 2009, Journal of structural biology.

[25]  Mitchell F. Balish,et al.  Novel Cellular Organization in a Gliding Mycoplasma, Mycoplasma insons , 2009, Journal of bacteriology.

[26]  A. Fisher,et al.  Peroxiredoxin-6 protects against mitochondrial dysfunction and liver injury during ischemia-reperfusion in mice. , 2009, American journal of physiology. Gastrointestinal and liver physiology.

[27]  Liang Ma,et al.  Mycoplasma genitalium-Encoded MG309 Activates NF-κB via Toll-Like Receptors 2 and 6 To Elicit Proinflammatory Cytokine Secretion from Human Genital Epithelial Cells , 2008, Infection and Immunity.

[28]  S. Rottem,et al.  Mycoplasma penetrans under nutritional stress: influence on lipid and lipoprotein profiles and on the binding to and invasion of HeLa cells. , 2008, FEMS microbiology letters.

[29]  G. Jensen,et al.  A Self-Associating Protein Critical for Chromosome Attachment, Division, and Polar Organization in Caulobacter , 2008, Cell.

[30]  D. Nakane,et al.  Cytoskeletal “jellyfish” structure of Mycoplasma mobile , 2007, Proceedings of the National Academy of Sciences.

[31]  Ariane Briegel,et al.  How electron cryotomography is opening a new window onto prokaryotic ultrastructure. , 2007, Current opinion in structural biology.

[32]  A. Frangakis,et al.  Structural analysis of Mycoplasma pneumoniae by cryo-electron tomography. , 2006, Journal of structural biology.

[33]  D. C. Krause,et al.  Terminal organelle development in the cell wall-less bacterium Mycoplasma pneumoniae , 2006, Proceedings of the National Academy of Sciences.

[34]  Yu-Ling Shih,et al.  The Bacterial Cytoskeleton , 2006, Microbiology and Molecular Biology Reviews.

[35]  Mitchell F. Balish,et al.  Ultrastructure and gliding motility of Mycoplasma amphoriforme, a possible human respiratory pathogen. , 2006, Microbiology.

[36]  Mitchell F. Balish,et al.  Subcellular structures of mycoplasmas. , 2006, Frontiers in bioscience : a journal and virtual library.

[37]  G. Jensen,et al.  Three‐dimensional structure of Mycoplasma pneumoniae’s attachment organelle and a model for its role in gliding motility , 2006, Molecular microbiology.

[38]  Takashi Shimizu,et al.  Lipid‐associated membrane proteins of Mycoplasma fermentans and M. penetrans activate human immunodeficiency virus long‐terminal repeats through Toll‐like receptors , 2004, Immunology.

[39]  I. Ginsburg,et al.  Intracellular Location and Survival of Mycoplasma penetrans Within HeLa Cells , 2004, Current Microbiology.

[40]  Jacob D. Jaffe,et al.  The complete genome and proteome of Mycoplasma mobile. , 2004, Genome research.

[41]  B. Henrich,et al.  OppA, the Substrate-Binding Subunit of the Oligopeptide Permease, Is the Major Ecto-ATPase of Mycoplasma hominis , 2004, Journal of bacteriology.

[42]  Mitchell F. Balish,et al.  Cellular engineering in a minimal microbe: structure and assembly of the terminal organelle of Mycoplasma pneumoniae , 2004, Molecular microbiology.

[43]  C. Jacobs-Wagner,et al.  The Bacterial Cytoskeleton An Intermediate Filament-Like Function in Cell Shape , 2003, Cell.

[44]  Mitchell F. Balish,et al.  Deletion analysis identifies key functional domains of the cytadherence‐associated protein HMW2 of Mycoplasma pneumoniae , 2003, Molecular microbiology.

[45]  Y. Sasaki,et al.  Multiple Promoter Inversions Generate Surface Antigenic Variation in Mycoplasma penetrans , 2003, Journal of bacteriology.

[46]  M. Hattori,et al.  The complete genomic sequence of Mycoplasma penetrans, an intracellular bacterial pathogen in humans. , 2002, Nucleic acids research.

[47]  M. Prevost,et al.  Phase Variation among Major Surface Antigens ofMycoplasma penetrans , 2001, Infection and Immunity.

[48]  C. Higgins,et al.  ABC transporters: physiology, structure and mechanism--an overview. , 2001, Research in microbiology.

[49]  P. Burkhard,et al.  Coiled coils: a highly versatile protein folding motif. , 2001, Trends in cell biology.

[50]  U. Hadding,et al.  The Adherence-Associated Lipoprotein P100, Encoded by an opp Operon Structure, Functions as the Oligopeptide-Binding Domain OppA of a Putative Oligopeptide Transport System in Mycoplasma hominis , 1999, Journal of bacteriology.

[51]  M. Prevost,et al.  Antigenic characterization and cytolocalization of P35, the major Mycoplasma penetrans antigen. , 1999, Microbiology.

[52]  Y. Naot,et al.  Molecular Biology and Pathogenicity of Mycoplasmas , 1998, Microbiology and Molecular Biology Reviews.

[53]  S. Rottem,et al.  Protein kinase C activation and vacuolation in HeLa cells invaded by Mycoplasma penetrans. , 1998, Journal of medical microbiology.

[54]  M. Prevost,et al.  Identification of two glycosylated components of Mycoplasma penetrans: a surface-exposed capsular polysaccharide and a glycolipid fraction. , 1998, Microbiology.

[55]  B. Berger,et al.  MultiCoil: A program for predicting two‐and three‐stranded coiled coils , 1997, Protein science : a publication of the Protein Society.

[56]  H. Shigematsu,et al.  Induction of Tumor Necrosis Factor Alpha (TNFα) and Enhancement of HIV‐1 Replication in the J22HL60 Cell Line by Mycoplasma penetrans , 1996, Microbiology and immunology.

[57]  H. Hilbert,et al.  Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae. , 1996, Nucleic acids research.

[58]  L. Montagnier,et al.  In vitro influence of Mycoplasma penetrans on activation of peripheral T lymphocytes from healthy donors or human immunodeficiency virus-infected individuals , 1995, Infection and immunity.

[59]  I. Rosenshine,et al.  Invasion of HeLa cells by Mycoplasma penetrans and the induction of tyrosine phosphorylation of a 145-kDa host cell protein. , 1995, FEMS microbiology letters.

[60]  A. Honigman,et al.  Mycoplasmas regulate HIV-LTR-dependent gene expression. , 1995, FEMS microbiology letters.

[61]  U. Hadding,et al.  Cytoadhesins of Mycoplasma hominis , 1993, Infection and immunity.

[62]  P. Pierce,et al.  High frequency of antibodies to Mycoplasma penetrans in HIV-infected patients , 1992, The Lancet.

[63]  P. Pierce,et al.  Mycoplasma penetrans sp. nov., from the urogenital tract of patients with AIDS. , 1992, International journal of systematic bacteriology.

[64]  P. Pierce,et al.  Newly discovered mycoplasma isolated from patients infected with HIV , 1991, The Lancet.

[65]  R. Wenzel,et al.  Enhanced isolation of Mycoplasma pneumoniae from throat washings with a newly-modified culture medium. , 1979, The Journal of infectious diseases.

[66]  U. K. Laemmli,et al.  Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4 , 1970, Nature.

[67]  P. Biberfeld,et al.  Ultrastructural Features of Mycoplasma pneumoniae , 1970, Journal of bacteriology.

[68]  Dominika A. Jurkovic,et al.  Analysis of energy sources for Mycoplasma penetrans gliding motility. , 2013, FEMS microbiology letters.

[69]  Mitchell F. Balish,et al.  Attachment organelle ultrastructure correlates with phylogeny, not gliding motility properties, in Mycoplasma pneumoniae relatives. , 2008, Microbiology.

[70]  B. Pettersson,et al.  Taxonomy of Mollicutes , 2002 .

[71]  M. Prevost,et al.  Mycoplasma penetrans bacteremia and primary antiphospholipid syndrome. , 1999, Emerging infectious diseases.

[72]  M. Prevost,et al.  Phase variations of the Mycoplasma penetrans main surface lipoprotein increase antigenic diversity. , 1999, Infection and immunity.