Functional Differentiation of Cyclins and Cyclin-Dependent Kinases in Giardia lamblia

Giardia lamblia CDKs (GlCDKs) and their cognate cyclins have not yet been studied. In this study, the functional roles of GlCDK1 and GlCDK2 were distinguished using morpholino-mediated knockdown and coimmunoprecipitation. GlCDK1 with Glcyclin 3977 plays a role in flagellum formation as well as cell cycle control of G. lamblia, whereas GlCDK2 with Glcyclin 22394/6584 is involved in cell cycle control. ABSTRACT Cyclin-dependent kinases (CDKs) are serine/threonine kinases that control the eukaryotic cell cycle. Limited information is available on Giardia lamblia CDKs (GlCDKs), GlCDK1 and GlCDK2. After treatment with the CDK inhibitor flavopiridol-HCl (FH), division of Giardia trophozoites was transiently arrested at the G1/S phase and finally at the G2/M phase. The percentage of cells arrested during prophase or cytokinesis increased, whereas DNA synthesis was not affected by FH treatment. Morpholino-mediated depletion of GlCDK1 caused arrest at the G2/M phase, while GlCDK2 depletion resulted in an increase in the number of cells arrested at the G1/S phase and cells defective in mitosis and cytokinesis. Coimmunoprecipitation experiments with GlCDKs and the nine putative G. lamblia cyclins (Glcyclins) identified Glcyclins 3977/14488/17505 and 22394/6584 as cognate partners of GlCDK1 and GlCDK2, respectively. Morpholino-based knockdown of Glcyclin 3977 or 22394/6584 arrested cells in the G2/M phase or G1/S phase, respectively. Interestingly, GlCDK1- and Glcyclin 3977-depleted Giardia showed significant flagellar extension. Altogether, our results suggest that GlCDK1/Glcyclin 3977 plays an important role in the later stages of cell cycle control and in flagellar biogenesis. In contrast, GlCDK2 along with Glcyclin 22394 and 6584 functions from the early stages of the Giardia cell cycle. IMPORTANCE Giardia lamblia CDKs (GlCDKs) and their cognate cyclins have not yet been studied. In this study, the functional roles of GlCDK1 and GlCDK2 were distinguished using morpholino-mediated knockdown and coimmunoprecipitation. GlCDK1 with Glcyclin 3977 plays a role in flagellum formation as well as cell cycle control of G. lamblia, whereas GlCDK2 with Glcyclin 22394/6584 is involved in cell cycle control.

[1]  Soon-Jung Park,et al.  Kinesin-13, a Motor Protein, is Regulated by Polo-like Kinase in Giardia lamblia , 2022, The Korean journal of parasitology.

[2]  S. Svärd,et al.  Dual RNA Sequencing Reveals Key Events When Different Giardia Life Cycle Stages Interact With Human Intestinal Epithelial Cells In Vitro , 2022, Frontiers in Cellular and Infection Microbiology.

[3]  Aaron R. Halpern,et al.  The Giardia ventrolateral flange is a lamellar membrane protrusion that supports attachment , 2022, PLoS pathogens.

[4]  S. Svärd,et al.  A Detailed Gene Expression Map of Giardia Encystation , 2021, Genes.

[5]  M. MacCoss,et al.  Identification of Actin Filament-Associated Proteins in Giardia lamblia , 2021, Microbiology spectrum.

[6]  I. Gutowska,et al.  Cyclin-Dependent Kinases (CDK) and Their Role in Diseases Development–Review , 2021, International journal of molecular sciences.

[7]  Soon-Jung Park,et al.  A polo-like kinase modulates cytokinesis and flagella biogenesis in Giardia lamblia , 2020, Parasites & Vectors.

[8]  Q. Zheng,et al.  CDK inhibitors in cancer therapy, an overview of recent development. , 2021, American journal of cancer research.

[9]  B. Clurman,et al.  A novel landscape of nuclear human CDK2 substrates revealed by in situ phosphorylation , 2020, Science Advances.

[10]  M. Wasserman,et al.  A new gene inventory of the ubiquitin and ubiquitin-like conjugation pathways in Giardia intestinalis , 2020, Memorias do Instituto Oswaldo Cruz.

[11]  J. Andersson,et al.  The compact genome of Giardia muris reveals important steps in the evolution of intestinal protozoan parasites , 2019, bioRxiv.

[12]  E. Merritt,et al.  Nek8445, a protein kinase required for microtubule regulation and cytokinesis in Giardia lamblia , 2019, bioRxiv.

[13]  J. Kondev,et al.  Length-dependent disassembly maintains four different flagellar lengths in Giardia , 2019, bioRxiv.

[14]  Soon-Jung Park,et al.  RNA-sequencing Profiles of Cell Cycle–Related Genes Upregulated during the G2-Phase in Giardia lamblia , 2019, The Korean journal of parasitology.

[15]  Soon-Jung Park,et al.  Roles of end‐binding 1 protein and gamma‐tubulin small complex in cytokinesis and flagella formation of Giardia lamblia , 2018, MicrobiologyOpen.

[16]  Pei-Yun Jenny Wu,et al.  Regulation of the program of DNA replication by CDK: new findings and perspectives , 2018, Current Genetics.

[17]  Jonathan L. Robinson,et al.  Targeting CDK2 overcomes melanoma resistance against BRAF and Hsp90 inhibitors , 2018, Molecular systems biology.

[18]  G. Dayer,et al.  Drug-Free Approach To Study the Unusual Cell Cycle of Giardia intestinalis , 2017, mSphere.

[19]  V. Minin,et al.  Myosin-independent cytokinesis in Giardia utilizes flagella to coordinate force generation and direct membrane trafficking , 2017, Proceedings of the National Academy of Sciences.

[20]  R. Mortara,et al.  Protein SUMOylation is Involved in Cell‐cycle Progression and Cell Morphology in Giardia lamblia , 2017, The Journal of eukaryotic microbiology.

[21]  Kyu-Ho Lee,et al.  Phosphorylation of Serine 148 in Giardia lamblia End‐binding 1 Protein is Important for Cell Division , 2017, The Journal of eukaryotic microbiology.

[22]  Z. Svindrych,et al.  Giardia intestinalis mitosomes undergo synchronized fission but not fusion and are constitutively associated with the endoplasmic reticulum , 2017, BMC Biology.

[23]  P. Nurse,et al.  CDK Substrate Phosphorylation and Ordering the Cell Cycle , 2016, Cell.

[24]  M. Gotta,et al.  Mitotic entry: The interplay between Cdk1, Plk1 and Bora , 2016, Cell cycle.

[25]  G. Hagen,et al.  Absence of a conventional spindle mitotic checkpoint in the binucleated single-celled parasite Giardia intestinalis. , 2016, European journal of cell biology.

[26]  J. Vicente,et al.  Mad2, Bub3, and Mps1 regulate chromosome segregation and mitotic synchrony in Giardia intestinalis, a binucleate protist lacking an anaphase-promoting complex , 2014, Molecular biology of the cell.

[27]  A. Rópolo,et al.  SUMOylation and deimination of proteins: two epigenetic modifications involved in Giardia encystation. , 2014, Biochimica et biophysica acta.

[28]  M. Malumbres Cyclin-dependent kinases , 2014, Genome Biology.

[29]  P. Kaldis,et al.  Cdks, cyclins and CKIs: roles beyond cell cycle regulation , 2013, Development.

[30]  L. Holt,et al.  The Giardia cell cycle progresses independently of the anaphase-promoting complex , 2013, Journal of Cell Science.

[31]  M. C. Touz,et al.  SUMOylation in Giardia lamblia: A Conserved Post-Translational Modification in One of the Earliest Divergent Eukaryotes , 2012, Biomolecules.

[32]  Johannes E. Schindelin,et al.  Fiji: an open-source platform for biological-image analysis , 2012, Nature Methods.

[33]  Chin-Hung Sun,et al.  Regulation of a Myb Transcription Factor by Cyclin-dependent Kinase 2 in Giardia lamblia* , 2011, The Journal of Biological Chemistry.

[34]  D. S. Reiner,et al.  The minimal kinome of Giardia lamblia illuminates early kinase evolution and unique parasite biology , 2011, Genome Biology.

[35]  S. Gourguechon,et al.  Rapid Tagging and Integration of Genes in Giardia intestinalis , 2010, Eukaryotic Cell.

[36]  Oscar Franzén,et al.  Genome analysis and comparative genomics of a Giardia intestinalis assemblage E isolate , 2010, BMC Genomics.

[37]  M. Henriksson,et al.  Phosphorylation by Cdk2 is required for Myc to repress Ras-induced senescence in cotransformation , 2009, Proceedings of the National Academy of Sciences.

[38]  D. S. Reiner,et al.  Draft Genome Sequencing of Giardia intestinalis Assemblage B Isolate GS: Is Human Giardiasis Caused by Two Different Species? , 2009, PLoS pathogens.

[39]  M. Carpenter,et al.  Using Morpholinos for Gene Knockdown in Giardia intestinalis , 2009, Eukaryotic Cell.

[40]  M. C. Touz,et al.  Arginine deiminase has multiple regulatory roles in the biology of Giardia lamblia , 2008, Journal of Cell Science.

[41]  D. S. Reiner,et al.  Synchronisation of Giardia lamblia: identification of cell cycle stage-specific genes and a differentiation restriction point. , 2008, International journal for parasitology.

[42]  E. Nigg,et al.  Plk1 regulates mitotic Aurora A function through βTrCP-dependent degradation of hBora , 2008, Chromosoma.

[43]  Sarah L. Williams,et al.  Giardia lamblia aurora kinase: a regulator of mitosis in a binucleate parasite. , 2008, International journal for parasitology.

[44]  W. Z. Cande,et al.  Cell Cycle Synchrony in Giardia intestinalis Cultures Achieved by Using Nocodazole and Aphidicolin , 2008, Eukaryotic Cell.

[45]  Feng Chen,et al.  Genomic Minimalism in the Early Diverging Intestinal Parasite Giardia lamblia , 2007, Science.

[46]  M. Crosby,et al.  Cell Cycle: Principles of Control , 2007, The Yale Journal of Biology and Medicine.

[47]  Lillian K. Fritz-Laylin,et al.  Kinesin-13 Regulates Flagellar, Interphase, and Mitotic Microtubule Dynamics in Giardia intestinalis , 2007, Eukaryotic Cell.

[48]  Miklós Müller,et al.  Core histone genes of Giardia intestinalis: genomic organization, promoter structure, and expression , 2007, BMC Molecular Biology.

[49]  W. Z. Cande,et al.  Three-dimensional analysis of mitosis and cytokinesis in the binucleate parasite Giardia intestinalis , 2006, Journal of Cell Science.

[50]  R. Poon,et al.  A roller coaster ride with the mitotic cyclins. , 2005, Seminars in cell & developmental biology.

[51]  J. Stiller,et al.  Comparative genomics of cyclin-dependent kinases suggest co-evolution of the RNAP II C-terminal domain and CTD-directed CDKs , 2004, Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004..

[52]  O. Bensaude,et al.  Investigating RNA polymerase II carboxyl-terminal domain (CTD) phosphorylation. , 2003, European journal of biochemistry.

[53]  B. Lee,et al.  Identification of an encystation-specific transcription factor, Myb protein in Giardia lamblia. , 2003, Molecular and biochemical parasitology.

[54]  J. McCaffery,et al.  The cytoskeleton of Giardia lamblia. , 2003, International journal for parasitology.

[55]  F. Gillin,et al.  A novel Myb‐related protein involved in transcriptional activation of encystation genes in Giardia lamblia , 2002, Molecular microbiology.

[56]  G. Prelich RNA Polymerase II Carboxy-Terminal Domain Kinases: Emerging Clues to Their Function , 2002, Eukaryotic Cell.

[57]  N. Pavletich Mechanisms of cyclin-dependent kinase regulation: structures of Cdks, their cyclin activators, and Cip and INK4 inhibitors. , 1999, Journal of molecular biology.

[58]  K. Klempnauer,et al.  Phosphorylation and activation of B-Myb by cyclin A–Cdk2 , 1997, Current Biology.

[59]  T. Coleman,et al.  Cdc2 regulatory factors. , 1994, Current opinion in cell biology.

[60]  H. Piwnica-Worms,et al.  Mechanisms of p34cdc2 regulation , 1993, Molecular and cellular biology.

[61]  E. Sausville,et al.  Growth inhibition with reversible cell cycle arrest of carcinoma cells by flavone L86-8275. , 1992, Journal of the National Cancer Institute.

[62]  K. Gould,et al.  Phosphorylation at Thr167 is required for Schizosaccharomyces pombe p34cdc2 function. , 1991, The EMBO journal.

[63]  D. Keister Axenic culture of Giardia lamblia in TYI-S-33 medium supplemented with bile. , 1983, Transactions of the Royal Society of Tropical Medicine and Hygiene.