Transcriptional profiling of underground interaction of two contrasting sunflower cultivars with the root parasitic weed Orobanche cumana

[1]  Lei Wang,et al.  Extensive inter-plant protein transfer between Cuscuta parasites and their host plants. , 2019, Molecular plant.

[2]  Juanjuan Li,et al.  5-aminolevolinic acid enhances sunflower resistance to Orobanche cumana (Broomrape) , 2019, Industrial Crops and Products.

[3]  L. Velasco,et al.  First Report of Sunflower Broomrape, Orobanche cumana Wallr., in Morocco , 2017 .

[4]  C. dePamphilis,et al.  MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs , 2017, Nature.

[5]  Xiaonan Xie,et al.  iTRAQ‐based proteomics of sunflower cultivars differing in resistance to parasitic weed Orobanche cumana , 2017, Proteomics.

[6]  K. Yoneyama,et al.  Seed treatment with salicylic acid invokes defence mechanism of Helianthus annuus against Orobanche cumana , 2016 .

[7]  Patrick Vincourt,et al.  Sunflower Resistance to Broomrape (Orobanche cumana) Is Controlled by Specific QTLs for Different Parasitism Stages , 2016, Front. Plant Sci..

[8]  M. Duca,et al.  Expression of defence-related genes in sunflower infected with broomrape , 2016 .

[9]  B. Pérez-Vich,et al.  History of the race structure of Orobanche cumana and the breeding of sunflower for resistance to this parasitic weed: A review , 2015 .

[10]  U. Fatima,et al.  Plant and pathogen nutrient acquisition strategies , 2015, Front. Plant Sci..

[11]  Z. Zhang,et al.  First Report of Race Composition and Distribution of Sunflower Broomrape, Orobanche cumana, in China. , 2015, Plant Disease.

[12]  Claude W. dePamphilis,et al.  Comparative Transcriptome Analyses Reveal Core Parasitism Genes and Suggest Gene Duplication and Repurposing as Sources of Structural Novelty , 2014, Molecular biology and evolution.

[13]  Y. Sugimoto,et al.  Heliolactone, a non-sesquiterpene lactone germination stimulant for root parasitic weeds from sunflower. , 2014, Phytochemistry.

[14]  C. dePamphilis,et al.  Genomic-scale exchange of mRNA between a parasitic plant and its hosts , 2014, Science.

[15]  D. Roby,et al.  Secretome analysis reveals effector candidates associated with broad host range necrotrophy in the fungal plant pathogen Sclerotinia sclerotiorum , 2014, BMC Genomics.

[16]  Pietro P. M. Iannetta,et al.  Identification, characterisation and discriminatory power of microsatellite markers in the parasitic weed Orobanche cumana , 2014 .

[17]  M. Collado-Romero,et al.  Pathogenic and molecular diversity in highly virulent populations of the parasitic weed Orobanche cumana (sunflower broomrape) from Europe , 2014 .

[18]  G. Martin,et al.  Allelic variation in two distinct Pseudomonas syringae flagellin epitopes modulates the strength of plant immune responses but not bacterial motility. , 2013, The New phytologist.

[19]  O. Spring,et al.  New sesquiterpene lactones from sunflower root exudate as germination stimulants for Orobanche cumana. , 2013, Journal of agricultural and food chemistry.

[20]  Colin N. Dewey,et al.  De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis , 2013, Nature Protocols.

[21]  Cole Trapnell,et al.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions , 2013, Genome Biology.

[22]  Naomi S. Altman,et al.  Functional genomics of a generalist parasitic plant: Laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression , 2013, BMC Plant Biology.

[23]  Liam J McGuffin,et al.  Structure and evolution of barley powdery mildew effector candidates , 2012, BMC Genomics.

[24]  J. Gouzy,et al.  Genomic insights into strategies used by Xanthomonas albilineans with its reduced artillery to spread within sugarcane xylem vessels , 2012, BMC Genomics.

[25]  Neil Moore,et al.  Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses , 2012, Nature Genetics.

[26]  C. Zipfel,et al.  Plant pattern recognition receptor complexes at the plasma membrane. , 2012, Current opinion in plant biology.

[27]  C. Allen,et al.  The In Planta Transcriptome of Ralstonia solanacearum: Conserved Physiological and Virulence Strategies during Bacterial Wilt of Tomato , 2012, mBio.

[28]  B. Pérez-Vich,et al.  Inheritance of resistance to sunflower broomrape (Orobanche cumana Wallr.) in an interspecific cross between Helianthus annuus and Helianthus debilis subsp. tardiflorus , 2012 .

[29]  S. Brunak,et al.  SignalP 4.0: discriminating signal peptides from transmembrane regions , 2011, Nature Methods.

[30]  Colin N. Dewey,et al.  RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome , 2011, BMC Bioinformatics.

[31]  C. Zipfel,et al.  Pathogen-Associated Molecular Pattern-Triggered Immunity: Veni, Vidi…? , 2010, Plant Physiology.

[32]  J. Rodenburg,et al.  Addressing current and future problems of parasitic weeds in rice , 2010 .

[33]  Davis J. McCarthy,et al.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..

[34]  S. Somerville,et al.  Host-pathogen warfare at the plant cell wall. , 2009, Current opinion in plant biology.

[35]  S. Ishiguro,et al.  Gateway vectors for plant transformation , 2009 .

[36]  E. Prats,et al.  Breeding approaches for crenate broomrape (Orobanche crenata Forsk.) management in pea (Pisum sativum L.). , 2009, Pest management science.

[37]  Cole Trapnell,et al.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome , 2009, Genome Biology.

[38]  M. Press,et al.  Striga infestation of cereal crops - an unsolved problem in resource limited agriculture. , 2008, Current opinion in plant biology.

[39]  T. Roitsch,et al.  Plant physiology meets phytopathology: plant primary metabolism and plant-pathogen interactions. , 2007, Journal of experimental botany.

[40]  R. Hückelhoven Cell wall-associated mechanisms of disease resistance and susceptibility. , 2007, Annual review of phytopathology.

[41]  F. Monteau,et al.  Molecular analysis of resistance mechanisms to Orobanche cumana in sunflower , 2007 .

[42]  D. Marion,et al.  Ha-DEF1, a sunflower defensin, induces cell death in Orobanche parasitic plants , 2007, Planta.

[43]  Jesús Jorrín,et al.  Pre-haustorial resistance to broomrape (Orobanche cumana) in sunflower (Helianthus annuus): cytochemical studies. , 2006, Journal of experimental botany.

[44]  R. García-Ruiz,et al.  Pathogenic diversity within field populations of Orobanche cumana and different reactions on sunflower genotypes , 2006 .

[45]  W. Seel,et al.  Differential resistance among host and non-host species underlies the variable success of the hemi-parasitic plant Rhinanthus minor. , 2006, Annals of botany.

[46]  Jonathan D. G. Jones,et al.  The plant immune system , 2006, Nature.

[47]  F. Sarhan,et al.  Putative fasciclin-like arabinogalactan-proteins (FLA) in wheat (Triticum aestivum) and rice (Oryza sativa): identification and bioinformatic analyses , 2006, Molecular Genetics and Genomics.

[48]  K. Yoneyama,et al.  Germination response of Orobanche seeds subjected to conditioning temperature, water potential and growth regulator treatments , 2005 .

[49]  J. Sauerborn,et al.  Two granular formulations of Fusarium oxysporum f.sp. orthoceras to mitigate sunflower broomrape Orobanche cumana , 2004, BioControl.

[50]  D. Joel,et al.  In vitro infection of host roots by differentiated calli of the parasitic plant Orobanche. , 2004, Journal of experimental botany.

[51]  M. Jurado-Expósito,et al.  Pronamide Applied to Sunflower Seeds for Orobanche cumana Control1 , 2003, Weed technology.

[52]  P. Labrousse,et al.  Several Mechanisms are Involved in Resistance of Helianthus to Orobanche cumana Wallr. , 2001 .

[53]  D. Joel The long-term approach to parasitic weeds control : manipulation of specific developmental mechanisms of the parasite , 2000 .

[54]  S. Brunak,et al.  Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. , 2000, Journal of molecular biology.

[55]  V. Velikova,et al.  Oxidative stress and some antioxidant systems in acid rain-treated bean plants Protective role of exogenous polyamines , 2000 .

[56]  Weijun Zhou,et al.  Uniconazole-induced alleviation of freezing injury in relation to changes in hormonal balance, enzyme activities and lipid peroxidation in winter rape , 1998, Plant Growth Regulation.

[57]  F. Daniel-Vedele,et al.  Nitrate transport: a key step in nitrate assimilation. , 1998, Current opinion in plant biology.

[58]  P. Lintilhac,et al.  Mechanical signals in plant development: a new method for single cell studies. , 1997, Developmental biology.

[59]  U. Sonnewald,et al.  A simplified procedure for the subtractive cDNA cloning of photoassimilate-responding genes: isolation of cDNAs encoding a new class of pathogenesis-related proteins , 1995, Plant Molecular Biology.

[60]  R. J. Porra,et al.  Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy , 1989 .

[61]  Johannes Helder,et al.  Plant degradation: A nematode expansin acting on plants , 2004, Nature.

[62]  Adam Godzik,et al.  Tolerating some redundancy significantly speeds up clustering of large protein databases , 2002, Bioinform..

[63]  N. Keen Gene-for-gene complementarity in plant-pathogen interactions. , 1990, Annual review of genetics.