Diversity of Anaerobic Microorganisms Involved in Long-Chain Fatty Acid Degradation in Methanogenic Sludges as Revealed by RNA-Based Stable Isotope Probing
暂无分享,去创建一个
Hideki Harada | Akiyoshi Ohashi | H. Harada | A. Ohashi | M. Hatamoto | H. Imachi | Masashi Hatamoto | Hiroyuki Imachi | Yuto Yashiro | Yuto Yashiro
[1] Lutgarde Raskin,et al. Microbial population dynamics during start‐up and overload conditions of anaerobic digesters treating municipal solid waste and sewage sludge , 2004, Biotechnology and bioengineering.
[2] B. Svensson,et al. Mesophilic syntrophic acetate oxidation during methane formation in biogas reactors , 1999 .
[3] T. Lueders,et al. Enhanced sensitivity of DNA- and rRNA-based stable isotope probing by fractionation and quantitative analysis of isopycnic centrifugation gradients. , 2003, Environmental microbiology.
[4] K. Kida,et al. Microbial community analysis of mesophilic anaerobic protein degradation process using bovine serum albumin (BSA)-fed continuous cultivation. , 2005, Journal of bioscience and bioengineering.
[5] B L Maidak,et al. The RDP-II (Ribosomal Database Project) , 2001, Nucleic Acids Res..
[6] Sang‐Hyoun Kim,et al. Inhibitory effects of long-chain fatty acids on VFA degradation and β-oxidation , 2003 .
[7] Amarjeet Bassi,et al. Long-term performance of high-rate anaerobic reactors for the treatment of oily wastewater. , 2006, Environmental science & technology.
[8] Philip Ineson,et al. Stable-isotope probing as a tool in microbial ecology , 2000, Nature.
[9] H. Harada,et al. Pilot-plant study on anaerobic treatment of a lipid- and protein-rich food industrial wastewater by a thermophilic multi-staged UASB reactor. , 2002, Water science and technology : a journal of the International Association on Water Pollution Research.
[10] C. Jeanthon,et al. Characterization of long-chain fatty-acid-degrading syntrophic associations from a biodegraded oil reservoir. , 2005, Research in microbiology.
[11] M. Wagner,et al. Use of Stable-Isotope Probing, Full-Cycle rRNA Analysis, and Fluorescence In Situ Hybridization-Microautoradiography To Study a Methanol-Fed Denitrifying Microbial Community , 2004, Applied and Environmental Microbiology.
[12] A. Whiteley,et al. Unlocking the 'microbial black box' using RNA-based stable isotope probing technologies. , 2006, Current opinion in biotechnology.
[13] Y. Kamagata,et al. Thermacetogenium phaeum gen. nov., sp. nov., a strictly anaerobic, thermophilic, syntrophic acetate-oxidizing bacterium. , 2000, International journal of systematic and evolutionary microbiology.
[14] H. Harada,et al. Process Performance and Sludge Behaviors of Multi-staged UASB reactor for Treatment of Palm Oil Mill Effluent (POME) , 2003 .
[15] P. Hugenholtz. Exploring prokaryotic diversity in the genomic era , 2002, Genome Biology.
[16] B. Schink. Energetics of syntrophic cooperation in methanogenic degradation , 1997, Microbiology and molecular biology reviews : MMBR.
[17] Alison M. Cupples,et al. Identification of in situ 2,4-dichlorophenoxyacetic acid-degrading soil microorganisms using DNA-stable isotope probing , 2007 .
[18] S. Goodison,et al. 16S ribosomal DNA amplification for phylogenetic study , 1991, Journal of bacteriology.
[19] Y. Kamagata,et al. Identification and Isolation of Anaerobic, Syntrophic Phthalate Isomer-Degrading Microbes from Methanogenic Sludges Treating Wastewater from Terephthalate Manufacturing , 2004, Applied and Environmental Microbiology.
[20] K. Schleifer,et al. ARB: a software environment for sequence data. , 2004, Nucleic acids research.
[21] H. Harada,et al. Identification and Cultivation of Anaerobic, Syntrophic Long-Chain Fatty Acid-Degrading Microbes from Mesophilic and Thermophilic Methanogenic Sludges , 2006, Applied and Environmental Microbiology.
[22] Thomas Huber,et al. Bellerophon: a program to detect chimeric sequences in multiple sequence alignments , 2004, Bioinform..
[23] Alfons J. M. Stams,et al. Microbial Communities Involved in Anaerobic Degradation of Unsaturated or Saturated Long-Chain Fatty Acids , 2006, Applied and Environmental Microbiology.
[24] B. Patel,et al. Anaerobaculum thermoterrenum gen. nov., sp. nov., a novel, thermophilic bacterium which ferments citrate. , 1997, International journal of systematic bacteriology.
[25] M. Friedrich. Stable-isotope probing of DNA: insights into the function of uncultivated microorganisms from isotopically labeled metagenomes. , 2006, Current opinion in biotechnology.
[26] L. Muxí,et al. Physiological and Molecular Characterisation of an Anaerobic Thermophilic Oleate-degrading Enrichment Culture , 2001 .
[27] Xiuzhu Dong,et al. Syntrophomonas curvata sp. nov., an anaerobe that degrades fatty acids in co-culture with methanogens. , 2004, International journal of systematic and evolutionary microbiology.
[28] I. Koster,et al. Inhibition of Methanogenesis from Acetate in Granular Sludge by Long-Chain Fatty Acids , 1987, Applied and environmental microbiology.
[29] T. Lueders,et al. Stable-Isotope Probing of Microorganisms Thriving at Thermodynamic Limits: Syntrophic Propionate Oxidation in Flooded Soil , 2004, Applied and Environmental Microbiology.
[30] Bo H. Svensson,et al. Mesophilic syntrophic acetate oxidation during methane formation by a triculture at high ammonium concentration , 1994, Archives of Microbiology.
[31] B. Patel,et al. Thermotoga elfii sp. nov., a novel thermophilic bacterium from an African oil-producing well. , 1995, International journal of systematic bacteriology.
[32] C. Kitts,et al. Terminal restriction fragment patterns: a tool for comparing microbial communities and assessing community dynamics. , 2001, Current issues in intestinal microbiology.
[33] R. Menes,et al. Detection of fatty acid beta-oxidizing syntrophic bacteria by fluorescence in situ hybridization. , 2006, Water science and technology : a journal of the International Association on Water Pollution Research.
[34] C. Etchebehere,et al. Coprothermobacter platensis sp. nov., a new anaerobic proteolytic thermophilic bacterium isolated from an anaerobic mesophilic sludge. , 1998, International journal of systematic bacteriology.
[35] H. Harada,et al. Syntrophomonas palmitatica sp. nov., an anaerobic, syntrophic, long-chain fatty-acid-oxidizing bacterium isolated from methanogenic sludge. , 2007, International journal of systematic and evolutionary microbiology.
[36] E. Madsen. The use of stable isotope probing techniques in bioreactor and field studies on bioremediation. , 2006, Current opinion in biotechnology.
[37] F. Rainey,et al. Thermosyntropha lipolytica gen. nov., sp. nov., a lipolytic, anaerobic, alkalitolerant, thermophilic bacterium utilizing short- and long-chain fatty acids in syntrophic coculture with a methanogenic archaeum. , 1996, International journal of systematic bacteriology.
[38] Lutgarde Raskin,et al. Quantification of Syntrophic Fatty Acid-β-Oxidizing Bacteria in a Mesophilic Biogas Reactor by Oligonucleotide Probe Hybridization , 1999, Applied and Environmental Microbiology.
[39] Hauke Smidt,et al. Syntrophomonas zehnderi sp. nov., an anaerobe that degrades long-chain fatty acids in co-culture with Methanobacterium formicicum. , 2007, International journal of systematic and evolutionary microbiology.
[40] M. P. Bryant,et al. Syntrophomonas wolfei subsp. saponavida subsp. nov., a Long-Chain Fatty-Acid-Degrading, Anaerobic, Syntrophic Bacterium; Syntrophomonas wolfei subsp. wolfei subsp. nov.; and Emended Descriptions of the Genus and Species , 1989 .
[41] B. Schink,et al. Clostridium ultunense sp. nov., a mesophilic bacterium oxidizing acetate in syntrophic association with a hydrogenotrophic methanogenic bacterium. , 1996, International journal of systematic bacteriology.
[42] A. Ogram,et al. Phylogeny of Acetate-Utilizing Microorganisms in Soils along a Nutrient Gradient in the Florida Everglades , 2006, Applied and Environmental Microbiology.
[43] E. Samain,et al. Synthrophomonas sapovorans sp. nov., a new obligately proton reducing anaerobe oxidizing saturated and unsaturated long chain fatty acids , 1986, Archives of Microbiology.
[44] Mark J. Bailey,et al. RNA Stable Isotope Probing, a Novel Means of Linking Microbial Community Function to Phylogeny , 2002, Applied and Environmental Microbiology.
[45] P A Vanrolleghem,et al. Coupling the SHARON process with anammox: model-based scenario analysis with focus on operating costs. , 2005, Water science and technology : a journal of the International Association on Water Pollution Research.
[46] M. P. Bryant,et al. Assignment of fatty acid-beta-oxidizing syntrophic bacteria to Syntrophomonadaceae fam. nov. on the basis of 16S rRNA sequence analyses. , 1993, International journal of systematic bacteriology.
[47] Richard E. Speece,et al. Anaerobic Biotechnology for Industrial Wastewaters , 1996 .
[48] Y. Kamagata,et al. Sequence-specific cleavage of 16S rRNA for rapid and quantitative detection of particular groups of anaerobes in bioreactors. , 2005, Water science and technology : a journal of the International Association on Water Pollution Research.
[49] A. Ogram,et al. Fatty Acid-Oxidizing Consortia along a Nutrient Gradient in the Florida Everglades , 2006, Applied and Environmental Microbiology.
[50] S. Wuertz,et al. Three-dimensional distribution of GFP-labeled Pseudomonas putida during biofilm formation on solid PAHs assessed by confocal laser scanning microscopy. , 2003, Water science and technology : a journal of the International Association on Water Pollution Research.
[51] Y. Kamagata,et al. Syntrophothermus lipocalidus gen. nov., sp. nov., a novel thermophilic, syntrophic, fatty-acid-oxidizing anaerobe which utilizes isobutyrate. , 2000, International journal of systematic and evolutionary microbiology.
[52] K. Kida,et al. Microbial diversity of mesophilic methanogenic consortium that can degrade long-chain fatty acids in chemostat cultivation. , 2006, Journal of bioscience and bioengineering.
[53] A. Stams,et al. Molecular monitoring of microbial diversity in expanded granular sludge bed (EGSB) reactors treating oleic acid. , 2002, FEMS microbiology ecology.
[54] Y Y Li,et al. High-rate methane fermentation of lipid-rich food wastes by a high-solids co-digestion process. , 2002, Water science and technology : a journal of the International Association on Water Pollution Research.
[55] C. Woese,et al. Syntrophus aciditrophicus sp. nov., a new anaerobic bacterium that degrades fatty acids and benzoate in syntrophic association with hydrogen-using microorganisms , 1999, Archives of Microbiology.