Biomolecular-Level Event Detection: A New Representation of Generating Short Sentence and Sample Selection Strategy

[1]  Yves Grandvalet,et al.  Extracting biomedical events from pairs of text entities , 2015, BMC Bioinformatics.

[2]  Sampo Pyysalo,et al.  Overview of BioNLP’09 Shared Task on Event Extraction , 2009, BioNLP@HLT-NAACL.

[3]  Zhiyong Lu,et al.  PubTator: a web-based text mining tool for assisting biocuration , 2013, Nucleic Acids Res..

[4]  Jeffrey Dean,et al.  Distributed Representations of Words and Phrases and their Compositionality , 2013, NIPS.

[5]  Tapio Salakoski,et al.  EVEX in ST’13: Application of a large-scale text mining resource to event extraction and network construction , 2013, BioNLP@ACL.

[6]  Xiaolei Ma,et al.  A Novel Sample Selection Strategy for Imbalanced Data of Biomedical Event Extraction with Joint Scoring Mechanism , 2016, Comput. Math. Methods Medicine.

[7]  Deyu Zhou,et al.  A semi-supervised learning framework for biomedical event extraction based on hidden topics , 2015, Artif. Intell. Medicine.

[8]  Bao-Quoc Ho,et al.  A Hybrid approach for biomedical event extraction , 2013, BioNLP@ACL.

[9]  Sophia Ananiadou,et al.  Boosting automatic event extraction from the literature using domain adaptation and coreference resolution , 2012, Bioinform..

[10]  Yijia Zhang,et al.  Biomedical event trigger detection by dependency-based word embedding , 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

[11]  Keun Ho Ryu,et al.  Self-training in significance space of support vectors for imbalanced biomedical event data , 2015, BMC Bioinformatics.

[12]  Xiaodong Gu,et al.  Cascaded Convolutional Neural Networks for Aspect-Based Opinion Summary , 2017, Neural Processing Letters.

[13]  Yue Wang,et al.  The Genia Event Extraction Shared Task, 2013 Edition - Overview , 2013, BioNLP@ACL.

[14]  Tapio Salakoski,et al.  Distributional Semantics Resources for Biomedical Text Processing , 2013 .

[15]  Yu Wang,et al.  Choosing Between Two Classification Learning Algorithms Based on Calibrated Balanced $$5\times 2$$5×2 Cross-Validated F-Test , 2016, Neural Processing Letters.

[16]  Hong Cai,et al.  Metrical Consistency NMF for Predicting Gene–Phenotype Associations , 2017, Interdisciplinary Sciences: Computational Life Sciences.

[17]  Jari Björne,et al.  University of Turku in the BioNLP'11 Shared Task , 2012, BMC Bioinformatics.

[18]  Shanshan Liu,et al.  Extracting Biomedical Event with Dual Decomposition Integrating Word Embeddings , 2016, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

[19]  Andrew McCallum,et al.  Fast and Robust Joint Models for Biomedical Event Extraction , 2011, EMNLP.