Large-scale gene expression profiling reveals major pathogenetic pathways of cartilage degeneration in osteoarthritis.

OBJECTIVE Despite many research efforts in recent decades, the major pathogenetic mechanisms of osteoarthritis (OA), including gene alterations occurring during OA cartilage degeneration, are poorly understood, and there is no disease-modifying treatment approach. The present study was therefore initiated in order to identify differentially expressed disease-related genes and potential therapeutic targets. METHODS This investigation consisted of a large gene expression profiling study performed based on 78 normal and disease samples, using a custom-made complementary DNA array covering >4,000 genes. RESULTS Many differentially expressed genes were identified, including the expected up-regulation of anabolic and catabolic matrix genes. In particular, the down-regulation of important oxidative defense genes, i.e., the genes for superoxide dismutases 2 and 3 and glutathione peroxidase 3, was prominent. This indicates that continuous oxidative stress to the cells and the matrix is one major underlying pathogenetic mechanism in OA. Also, genes that are involved in the phenotypic stability of cells, a feature that is greatly reduced in OA cartilage, appeared to be suppressed. CONCLUSION Our findings provide a reference data set on gene alterations in OA cartilage and, importantly, indicate major mechanisms underlying central cell biologic alterations that occur during the OA disease process. These results identify molecular targets that can be further investigated in the search for therapeutic interventions.

[1]  G. Verbruggen,et al.  Homeostasis of the extracellular matrix of normal and osteoarthritic human articular cartilage chondrocytes in vitro. , 2003, Osteoarthritis and cartilage.

[2]  T. Aigner,et al.  Immunolocalization of type X collagen in normal fetal and adult osteoarthritic cartilage with monoclonal antibodies. , 1996, Matrix biology : journal of the International Society for Matrix Biology.

[3]  R Herwig,et al.  Comparative gene expression profiling by oligonucleotide fingerprinting. , 1998, Nucleic acids research.

[4]  Mirela Ionescu,et al.  The pathobiology of focal lesion development in aging human articular cartilage and molecular matrix changes characteristic of osteoarthritis. , 2003, Arthritis and rheumatism.

[5]  T. Aigner,et al.  Freshly isolated osteoarthritic chondrocytes are catabolically more active than normal chondrocytes, but less responsive to catabolic stimulation with interleukin-1beta. , 2005, Arthritis and rheumatism.

[6]  P. Roughley,et al.  Contents and distributions of the proteoglycans decorin and biglycan in normal and osteoarthritic human articular cartilage , 1996, Journal of orthopaedic research : official publication of the Orthopaedic Research Society.

[7]  N. Cairns,et al.  Quantifying mRNA in postmortem human brain: influence of gender, age at death, postmortem interval, brain pH, agonal state and inter-lobe mRNA variance. , 2003, Brain research. Molecular brain research.

[8]  D. Heinegård,et al.  Altered patterns and synthesis of extracellular matrix macromolecules in early osteoarthritis. , 2004, Matrix biology : journal of the International Society for Matrix Biology.

[9]  R. Mason,et al.  Gene deletion of either interleukin-1beta, interleukin-1beta-converting enzyme, inducible nitric oxide synthase, or stromelysin 1 accelerates the development of knee osteoarthritis in mice after surgical transection of the medial collateral ligament and partial medial meniscectomy. , 2003, Arthritis and rheumatism.

[10]  H. Mankin,et al.  Collagen synthesis in normal and osteoarthritic human cartilage. , 1977, The Journal of clinical investigation.

[11]  B Kurz,et al.  Oxygen and reactive oxygen species in cartilage degradation: friends or foes? , 2005, Osteoarthritis and cartilage.

[12]  T. Aigner,et al.  Suppression of cartilage matrix gene expression in upper zone chondrocytes of osteoarthritic cartilage. , 1997, Arthritis and rheumatism.

[13]  D. Kingsley,et al.  Mutations in ANKH cause chondrocalcinosis. , 2002, American journal of human genetics.

[14]  T. Aigner,et al.  Independent expression of fibril-forming collagens I, II, and III in chondrocytes of human osteoarthritic cartilage. , 1993, The Journal of clinical investigation.

[15]  J. Loughlin The genetic epidemiology of human primary osteoarthritis: current status , 2005, Expert Reviews in Molecular Medicine.

[16]  A. Poole,et al.  A fibronectin fragment induces type II collagen degradation by collagenase through an interleukin-1-mediated pathway. , 2002, Arthritis and rheumatism.

[17]  R A Irizarry,et al.  On the utility of pooling biological samples in microarray experiments. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[18]  L. Southam,et al.  Functional variants within the secreted frizzled-related protein 3 gene are associated with hip osteoarthritis in females. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[19]  Richard R. Behringer,et al.  Sox9 is required for cartilage formation , 1999, Nature Genetics.

[20]  H. Dorfman,et al.  Biochemical and metabolic abnormalities in articular cartilage from osteo-arthritic human hips. II. Correlation of morphology with biochemical and metabolic data. , 1971, The Journal of bone and joint surgery. American volume.

[21]  M. Doherty,et al.  Extended haplotypes and linkage disequilibrium in the IL1R1–IL1A–IL1B–IL1RN gene cluster: association with knee osteoarthritis , 2004, Genes and Immunity.

[22]  A. Poole Can serum biomarker assays measure the progression of cartilage degeneration in osteoarthritis? , 2002, Arthritis and rheumatism.

[23]  T. Aigner,et al.  Activation of collagen type II expression in osteoarthritic and rheumatoid cartilage , 1992, Virchows Archiv. B, Cell pathology including molecular pathology.

[24]  D. Salter,et al.  Tenascin is increased in cartilage and synovium from arthritic knees. , 1993, British journal of rheumatology.

[25]  Frederick Albert Matsen IV,et al.  Reexpression of type IIA procollagen by adult articular chondrocytes in osteoarthritic cartilage. , 1999, Arthritis and rheumatism.

[26]  C. Müller,et al.  Large-scale clustering of cDNA-fingerprinting data. , 1999, Genome research.

[27]  M. Goldring,et al.  Osteoarthritis and cartilage: The role of cytokines , 2000, Current rheumatology reports.

[28]  T. Aigner,et al.  Repression of anti-proliferative factor Tob1 in osteoarthritic cartilage , 2005, Arthritis research & therapy.

[29]  G. Homandberg,et al.  Cartilage chondrolysis by fibronectin fragments causes cleavage of aggrecan at the same site as found in osteoarthritic cartilage. , 1997, Osteoarthritis and cartilage.

[30]  T. Aigner,et al.  Severe disturbance of the distribution and expression of type VI collagen chains in osteoarthritic articular cartilage. , 1998, Arthritis and rheumatism.

[31]  S. Werner,et al.  Heterozygous deficiency of manganese superoxide dismutase results in severe lipid peroxidation and spontaneous apoptosis in murine myocardium in vivo. , 2005, Free radical biology & medicine.

[32]  K. Marshall,et al.  cDNA arrays in degenerative arthritis research , 2006 .

[33]  Hans-Jürgen Thiesen,et al.  Cis- and trans-acting gene regulation is associated with osteoarthritis. , 2006, American journal of human genetics.

[34]  S. Matsuda,et al.  In search of a function for the TIS21/PC3/BTG1/TOB family , 2001, FEBS letters.

[35]  Sandrine Dudoit,et al.  Bioconductor R Packages for Exploratory Analysis and Normalization of cDNA Microarray Data , 2003 .

[36]  V. Lefebvre,et al.  Production of collagens, collagenase and collagenase inhibitor during the dedifferentiation of articular chondrocytes by serial subcultures. , 1990, Biochimica et biophysica acta.

[37]  T. Spector,et al.  Association between a variation in LRCH1 and knee osteoarthritis: a genome-wide single-nucleotide polymorphism association study using DNA pooling. , 2006, Arthritis and rheumatism.

[38]  T. Aigner,et al.  IL-1β induction of IL-6 and LIF in normal articular human chondrocytes involves the ERK, p38 and NFκB signaling pathways , 2004 .

[39]  T. Aigner,et al.  Quantification of expression levels of cellular differentiation markers does not support a general shift in the cellular phenotype of osteoarthritic chondrocytes , 2003, Journal of orthopaedic research : official publication of the Orthopaedic Research Society.

[40]  N. Cairns,et al.  An optimistic view for quantifying mRNA in post-mortem human brain. , 2003, Brain research. Molecular brain research.

[41]  T. Spector,et al.  Association study of candidate genes for the prevalence and progression of knee osteoarthritis. , 2004, Arthritis and rheumatism.

[42]  V. Lefebvre,et al.  Parallel expression of Sox9 and Col2a1 in cells undergoing chondrogenesis , 1997, Developmental dynamics : an official publication of the American Association of Anatomists.

[43]  T. Aigner,et al.  SOX9 expression does not correlate with type II collagen expression in adult articular chondrocytes. , 2003, Matrix biology : journal of the International Society for Matrix Biology.

[44]  T. Aigner,et al.  Effective isolation of high-quality total RNA from human adult articular cartilage. , 2000, Analytical biochemistry.

[45]  M. Tiku,et al.  Aggrecan degradation in chondrocytes is mediated by reactive oxygen species and protected by antioxidants. , 1999, Free radical research.

[46]  W. Horton,et al.  Intrajoint comparisons of gene expression patterns in human osteoarthritis suggest a change in chondrocyte phenotype , 2005, Journal of orthopaedic research : official publication of the Orthopaedic Research Society.

[47]  H. Bratzke,et al.  Visualization of postmortem chondrocyte damage by vital staining and confocal laser scanning 3D microscopy. , 2002, Journal of forensic sciences.

[48]  T. Aigner,et al.  Subtyping of osteoarthritic synoviopathy. , 2002, Clinical and experimental rheumatology.

[49]  W. Horton,et al.  Overview of studies comparing human normal cartilage with minimal and advanced osteoarthritic cartilage. , 2005, Clinical and experimental rheumatology.

[50]  T. Spector,et al.  Reproducible genetic associations between candidate genes and clinical knee osteoarthritis in men and women. , 2006, Arthritis and rheumatism.

[51]  G. Lust,et al.  Synthesis of fibronectin in normal and osteoarthritic articular cartilage. , 1984, Biochimica et biophysica acta.

[52]  Yusuke Nakamura,et al.  An aspartic acid repeat polymorphism in asporin inhibits chondrogenesis and increases susceptibility to osteoarthritis , 2005, Nature Genetics.

[53]  T. Aigner,et al.  Relative messenger RNA expression profiling of collagenases and aggrecanases in human articular chondrocytes in vivo and in vitro. , 2002, Arthritis and rheumatism.

[54]  John D. Storey,et al.  Statistical significance for genomewide studies , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[55]  A Zien,et al.  Anabolic and catabolic gene expression pattern analysis in normal versus osteoarthritic cartilage using complementary DNA-array technology. , 2001, Arthritis and rheumatism.

[56]  E. Thonar,et al.  Biochemical changes in progressive osteoarthrosis. , 1977, Annals of the rheumatic diseases.