Transcriptome sequence resource for the cucurbit powdery mildew pathogen Podosphaera xanthii

[1]  F. Faretra,et al.  Transcriptome sequence resource for the cucurbit powdery mildew pathogen Podosphaera xanthii , 2019, Scientific Data.

[2]  A. de Vicente,et al.  The Functional Characterization of Podosphaera xanthii Candidate Effector Genes Reveals Novel Target Functions for Fungal Pathogenicity. , 2018, Molecular plant-microbe interactions : MPMI.

[3]  B. Thomma,et al.  Transposable Elements Direct The Coevolution between Plants and Microbes. , 2017, Trends in genetics : TIG.

[4]  Rocío Bautista,et al.  De novo Analysis of the Epiphytic Transcriptome of the Cucurbit Powdery Mildew Fungus Podosphaera xanthii and Identification of Candidate Secreted Effector Proteins , 2016, PloS one.

[5]  Ana Conesa,et al.  Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data , 2015, Bioinform..

[6]  Evgeny M. Zdobnov,et al.  BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs , 2015, Bioinform..

[7]  A. Pirondi,et al.  Genetic diversity analysis of the cucurbit powdery mildew fungus Podosphaera xanthii suggests a clonal population structure. , 2015, Fungal biology.

[8]  Björn Usadel,et al.  Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..

[9]  F. Faretra,et al.  Variation in Podosphaera xanthii on Cucurbits in Southern Italy , 2011 .

[10]  N. Friedman,et al.  Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data , 2011, Nature Biotechnology.

[11]  T. Miyamoto,et al.  Occurrence of boscalid resistance in cucumber powdery mildew in Japan and molecular characterization of the iron–sulfur protein of succinate dehydrogenase of the causal fungus , 2010, Journal of General Plant Pathology.

[12]  Ning Ma,et al.  BLAST+: architecture and applications , 2009, BMC Bioinformatics.

[13]  Alejandro Pérez-García,et al.  The powdery mildew fungus Podosphaera fusca (synonym Podosphaera xanthii), a constant threat to cucurbits. , 2009, Molecular plant pathology.

[14]  Jerzy Jurka,et al.  Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor , 2006, BMC Bioinformatics.

[15]  Lin Fang,et al.  WEGO: a web tool for plotting GO annotations , 2006, Nucleic Acids Res..

[16]  Juan Miguel García-Gómez,et al.  BIOINFORMATICS APPLICATIONS NOTE Sequence analysis Manipulation of FASTQ data with Galaxy , 2005 .

[17]  D. Nuss Hypovirulence: Mycoviruses at the fungal–plant interface , 2005, Nature Reviews Microbiology.

[18]  J. Jurka,et al.  Repbase Update, a database of eukaryotic repetitive elements , 2005, Cytogenetic and Genome Research.

[19]  X. Huang,et al.  CAP3: A DNA sequence assembly program. , 1999, Genome research.

[20]  F. Faretra,et al.  New insights into biology, transcriptome analysis and control strategies of the cucurbit pathogen Podosphaera xanthii , 2018 .

[21]  Transposons: The Jumping Genes , 2017 .

[22]  U. Braun The powdery mildews (Erysiphales) of Europe , 1995 .