Cell Nuclei Segmentation Combining Multiresolution Analysis, Clustering Methods and Colour Spaces

In this paper a new method for medical images analysis has been proposed. It is based in a multiresolution schema in combination with a k-means clustering algorithm. The edge detection and classification schema is based on the analysis of the data obtained by a multiresolution image analysis (MRA) using Mallat and Zhong's wavelet. The edge detection and classification algorithm developed has been tested defining five contour types: step, ramp, stair, pulse and 'noise'. The cell nuclei presented in medical images can be perfectly isolated with the help of the 'cellular nucleus' contour, a special noise reduction achieved by means of the previous classification schema and a segmentation process provided by a k-means algorithm. We have proposed an algorithm to estimate the number of cells appearing in tissue samples, as well as the estimate of positivity levels in tumour tissues. This is part of a software tool for tumour detection and diagnosis of diseases.

[1]  Stéphane Mallat,et al.  Characterization of Signals from Multiscale Edges , 2011, IEEE Trans. Pattern Anal. Mach. Intell..

[2]  John Flynn,et al.  Automated processing of shoeprint images based on the Fourier transform for use in forensic science , 2005, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[3]  Albert C. S. Chung,et al.  A nonlinear and non-iterative noise reduction technique for medical images: concept and methods comparison , 2004, CARS.

[4]  Dar-Ren Chen,et al.  Watershed segmentation for breast tumor in 2-D sonography. , 2004, Ultrasound in medicine & biology.

[5]  Hamid Soltanian-Zadeh,et al.  Unsupervised MRI segmentation with spatial connectivity , 2002, SPIE Medical Imaging.

[6]  Mausumi Acharyya,et al.  An adaptive approach to unsupervised texture segmentation using M-Band wavelet transform , 2001, Signal Process..

[7]  Xose Manuel Pardo,et al.  Biomedical active segmentation guided by edge saliency , 2000, Pattern Recognit. Lett..

[8]  Marcel J. T. Reinders,et al.  On-line detection of red blood cell shape using deformable templates , 2000, Pattern Recognit. Lett..

[9]  Refractor Vision , 2000, The Lancet.

[10]  Edward R. Dougherty,et al.  The granulometric size density in filter optimization , 1999, XII Brazilian Symposium on Computer Graphics and Image Processing (Cat. No.PR00481).

[11]  J. Barba,et al.  A parametric fitting algorithm for segmentation of cell images , 1998, IEEE Transactions on Biomedical Engineering.

[12]  Roberto Manduchi,et al.  Bilateral filtering for gray and color images , 1998, Sixth International Conference on Computer Vision (IEEE Cat. No.98CH36271).

[13]  Girod Alexandre,et al.  Computerized classification of the shoeprints of burglars' soles , 1996 .

[14]  Zeno Geradts,et al.  The image-database REBEZO for shoeprints with developments on automatic classification of shoe outsole designs , 1996 .

[15]  José Ramón Beltrán,et al.  Edge detection and classification using Mallat's wavelet , 1994, Proceedings of 1st International Conference on Image Processing.

[16]  Alberto M. Marchevsky,et al.  Image Analysis: A Primer for Pathologists , 1994 .

[17]  E. Dougherty,et al.  Gray-scale morphological granulometric texture classification , 1994 .

[18]  Graham Jones,et al.  Image segmentation using texture boundary detection , 1994, Pattern Recognit. Lett..

[19]  Jeff B. Pelz,et al.  Morphological texture-based maximum-likelihood pixel classification based on local granulometric moments , 1992, Pattern Recognit..

[20]  Jeff B. Pelz,et al.  Image Segmentation By Local Morphological Granulometries , 1989, 12th Canadian Symposium on Remote Sensing Geoscience and Remote Sensing Symposium,.

[21]  Stéphane Mallat,et al.  A Theory for Multiresolution Signal Decomposition: The Wavelet Representation , 1989, IEEE Trans. Pattern Anal. Mach. Intell..

[22]  Nuggehally Sampath Jayant,et al.  An adaptive clustering algorithm for image segmentation , 1989, International Conference on Acoustics, Speech, and Signal Processing,.

[23]  Thrasyvoulos N. Pappas,et al.  An Adaptive Clustering Algorithm For Image Segmentation , 1988, [1988 Proceedings] Second International Conference on Computer Vision.

[24]  John F. Canny,et al.  A Computational Approach to Edge Detection , 1986, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[25]  J. Galayda Edge Focusing , 1981, IEEE Transactions on Nuclear Science.

[26]  A. Rosenfeld,et al.  Edge and Curve Detection for Visual Scene Analysis , 1971, IEEE Transactions on Computers.

[27]  J. Lee,et al.  Color image segmentation for identification of the bladder cancer , 1999 .

[28]  William V. Stoecker,et al.  Unsupervised color image segmentation: with application to skin tumor borders , 1996 .

[29]  Edward R. Dougherty,et al.  Morphological pattern-spectrum classification of noisy shapes: Exterior granulometries , 1995, Pattern Recognit..

[30]  Josef Kittler,et al.  Minimum error thresholding , 1986, Pattern Recognit..

[31]  E. Dubois,et al.  Digital picture processing , 1985, Proceedings of the IEEE.