Electrical detection of DNA hybridization: three extraction techniques based on interdigitated Al/Al2O3 capacitors.

Based on interdigitated aluminum electrodes covered with Al(2)O(3) and silver precipitation via biotin-antibody coupled gold nano-labels as signal enhancement, three complementary electrical methods were used and compared to detect the hybridization of target DNA for concentrations down to the 50 pM of a PCR product from cytochrome P450 2b2 gene. Human hepatic cytochrome P450 (CYP) enzymes participate in detoxification metabolism of xenobiotics. Therefore, determination of mutational status of P450 gene in a patient could have a significant impact on the choice of a medical treatment. Our three electrical extraction procedures are performed on the same interdigitated capacitive sensor lying on a passivated silicon substrate and consist in the measurement of respectively the low-frequency inter-electrodes capacitance, the high-frequency self-resonance frequency, and the equivalent MOS capacitance between the short-circuited electrodes and the backside metallization of the silicon substrate. This study is the first of its kind as it opens the way for correlation studies and noise reduction techniques based on multiple electrical measurements of the same DNA hybridization event with a single sensor.

[1]  Michael Schäferling,et al.  Optical technologies for the read out and quality control of DNA and protein microarrays , 2006, Analytical and bioanalytical chemistry.

[2]  Eric Nebling,et al.  Electrical detection of viral DNA using ultramicroelectrode arrays. , 2004, Analytical chemistry.

[3]  Joel P Golden,et al.  A comparison of imaging methods for use in an array biosensor. , 2002, Biosensors & bioelectronics.

[4]  Andreas Offenhäusser,et al.  Possibilities and limitations of label-free detection of DNA hybridization with field-effect-based devices , 2005 .

[5]  S Hamels,et al.  Comparison between different strategies of covalent attachment of DNA to glass surfaces to build DNA microarrays. , 2000, Analytical biochemistry.

[6]  J. E. Mattson,et al.  A Group-IV Ferromagnetic Semiconductor: MnxGe1−x , 2002, Science.

[7]  D. D. Montgomery,et al.  Immunoassays and sequence-specific DNA detection on a microchip using enzyme amplified electrochemical detection. , 2004, Journal of biochemical and biophysical methods.

[8]  G. Eckstein,et al.  First results on label-free detection of DNA and protein molecules using a novel integrated sensor technology based on gravimetric detection principles. , 2004, Biosensors & bioelectronics.

[9]  Luke P. Lee,et al.  Theoretical and experimental study towards a nanogap dielectric biosensor. , 2005, Biosensors & bioelectronics.

[10]  M F Lawrence,et al.  Impedance-based detection of DNA sequences using a silicon transducer with PNA as the probe layer. , 2004, Nucleic acids research.

[11]  C. Mirkin,et al.  Array-Based Electrical Detection of DNA with Nanoparticle Probes , 2002, Science.

[12]  Denis Flandre,et al.  Sensitive DNA electrical detection based on interdigitated Al/Al2O3 microelectrodes , 2004 .

[13]  Denis Flandre,et al.  Immobilization of DNA on CMOS compatible materials , 2003 .