Automatic dendrometry: Tree detection, tree height and diameter estimation using terrestrial laser scanning

Abstract This study presents an automatic method to identify tree stems, and estimate tree heights and diameters from terrestrial laser scanning (TLS) data. The method is based on the isolation and vertical continuity of the stems. First, a height-normalized version of the point cloud is created. From this, stems are individualized, an iterative process is applied to the points at breast height for estimating diameters, and tree heights are calculated after denoising and clustering the points of each tree. The method was tested in three different sites. All the elements detected as trees were actual trees, and more than 99% of the trees in the plots were detected. Root mean square error (RMSE) of the estimated diameters at breast height (DBH) ranged from 0.8 to 1.3 cm in the test plots, and total tree height (TH) RMSE ranged from 0.3 to 0.7 m. In the cases studied, the algorithm showed robustness to the presence of steep or irregular terrain, the presence of low vegetation and artifacts at breast height, the indistinct use of individual or multiple scans, and tree density in the plot.

[1]  Stefan Norra,et al.  Terrestrial laser scanning for estimating urban tree volume and carbon content , 2012 .

[2]  AstrupRasmus,et al.  Approaches for estimating stand-level volume using terrestrial laser scanning in a single-scan mode , 2014 .

[3]  Helene C. Muller-Landau,et al.  Measuring tree height: a quantitative comparison of two common field methods in a moist tropical forest , 2013 .

[4]  J. Holmgren,et al.  Estimation of stem attributes using a combination of terrestrial and airborne laser scanning , 2012, European Journal of Forest Research.

[5]  R. McRoberts,et al.  A questionnaire-based review of the operational use of remotely sensed data by national forest inventories , 2016 .

[6]  P. Brando,et al.  Forest health and global change , 2015, Science.

[7]  Nancy F. Glenn,et al.  PARTIAL UNMIXING OF HYPERSPECTRAL IMAGERY: THEORY AND METHODS , 2007 .

[8]  S. Popescu,et al.  Measuring individual tree crown diameter with lidar and assessing its influence on estimating forest volume and biomass , 2003 .

[9]  Juha Hyyppä,et al.  Detecting Changes in Forest Structure over Time with Bi-Temporal Terrestrial Laser Scanning Data , 2012, ISPRS Int. J. Geo Inf..

[10]  Charles K. Toth,et al.  Remote sensing platforms and sensors: A survey , 2016 .

[11]  Alan H. Strahler,et al.  Retrieval of forest structural parameters using a ground-based lidar instrument (Echidna®) , 2008 .

[12]  Daniel L. Schmoldt,et al.  A Review of Past Research on Dendrometers , 2000, Forest Science.

[13]  J. Hyyppä,et al.  Review of methods of small‐footprint airborne laser scanning for extracting forest inventory data in boreal forests , 2008 .

[14]  Stefan Fleck,et al.  Comparison of conventional eight-point crown projections with LIDAR-based virtual crown projections in a temperate old-growth forest , 2011, Annals of Forest Science.

[15]  Philippe Santenoise,et al.  Terrestrial laser scanning for measuring the solid wood volume, including branches, of adult standing trees in the forest environment , 2012 .

[16]  Joanne C. White,et al.  Airborne laser scanning and digital stereo imagery measures of forest structure: comparative results and implications to forest mapping and inventory update , 2013 .

[17]  Tsuyoshi Inoue,et al.  Lidar-based individual tree species classification using convolutional neural network , 2017, Optical Metrology.

[18]  A. Al-Sharadqah,et al.  Error analysis for circle fitting algorithms , 2009, 0907.0421.

[19]  Carlos Cabo,et al.  An algorithm for automatic detection of pole-like street furniture objects from Mobile Laser Scanner point clouds , 2014 .

[20]  Juha Hyyppä,et al.  Automatic Stem Mapping by Merging Several Terrestrial Laser Scans at the Feature and Decision Levels , 2013, Sensors.

[21]  P. Gong,et al.  Automated methods for measuring DBH and tree heights with a commercial scanning lidar , 2011 .

[22]  Juha Hyyppä,et al.  Automatic Stem Mapping Using Single-Scan Terrestrial Laser Scanning , 2012, IEEE Transactions on Geoscience and Remote Sensing.

[23]  Christian Jauvin,et al.  PypeTree: A Tool for Reconstructing Tree Perennial Tissues from Point Clouds , 2014, Sensors.

[24]  Johannes Heinzel,et al.  Detecting Tree Stems from Volumetric TLS Data in Forest Environments with Rich Understory , 2016, Remote. Sens..

[25]  Hans-Gerd Maas,et al.  Automatic forest inventory parameter determination from terrestrial laser scanner data , 2008 .

[26]  Alessandro Flammini,et al.  The Contribution of Agriculture, Forestry and other Land Use activities to Global Warming, 1990–2012 , 2015, Global change biology.

[27]  J. Bufton Laser altimetry measurements from aircraft and spacecraft , 1989, Proc. IEEE.

[28]  H. Maas,et al.  Tree Topology Representation from TLS Point Clouds Using Depth-First Search in Voxel Space , 2012 .

[29]  Annika Kangas,et al.  Forest inventory: methodology and applications. , 2006 .

[30]  C. Hopkinson,et al.  Assessing forest metrics with a ground-based scanning lidar , 2004 .

[31]  Johan Holmgren,et al.  Tree Stem and Height Measurements using Terrestrial Laser Scanning and the RANSAC Algorithm , 2014, Remote. Sens..

[32]  M. Vastaranta,et al.  Status and prospects for LiDAR remote sensing of forested ecosystems , 2013 .

[33]  Alan Grainger,et al.  Dynamics of global forest area: Results from the FAO Global Forest Resources Assessment 2015 , 2015 .

[34]  C. Woodcock,et al.  Measuring forest structure and biomass in New England forest stands using Echidna ground-based lidar , 2011 .

[35]  Richard A. Fournier,et al.  An architectural model of trees to estimate forest structural attributes using terrestrial LiDAR , 2011, Environ. Model. Softw..

[36]  Guang Zheng,et al.  Retrieving Forest Inventory Variables with Terrestrial Laser Scanning (TLS) in Urban Heterogeneous Forest , 2011, Remote. Sens..

[37]  M. Vastaranta,et al.  Terrestrial laser scanning in forest inventories , 2016 .

[38]  Ville Kankare,et al.  Diameter distribution estimation with laser scanning based multisource single tree inventory , 2015 .

[39]  K. Macdicken,et al.  Global Forest Resources Assessment 2015: What, why and how?☆ , 2015 .

[40]  M. Herold,et al.  Data acquisition considerations for Terrestrial Laser Scanning of forest plots , 2017 .

[41]  W. Gander,et al.  Least-squares fitting of circles and ellipses , 1994 .

[42]  Pablo J. Zarco-Tejada,et al.  Field characterization of olive (Olea europaea L.) tree crown architecture using terrestrial laser scanning data , 2011 .

[43]  Martin Mokros,et al.  Accuracy of tree diameter estimation from terrestrial laser scanning by circle-fitting methods , 2017, Int. J. Appl. Earth Obs. Geoinformation.

[44]  Pete Watt,et al.  Measuring forest structure with terrestrial laser scanning , 2005 .

[45]  Michael A. Lefsky,et al.  Volume estimates of trees with complex architecture from terrestrial laser scanning , 2008 .

[46]  Field Note—Comparison of Three Dendrometers in Measuring Diameter at Breast Height Field Note , 2002 .

[47]  E. Næsset Predicting forest stand characteristics with airborne scanning laser using a practical two-stage procedure and field data , 2002 .

[48]  Juha Hyyppä,et al.  Automated matching of multiple terrestrial laser scans for stem mapping without the use of artificial references , 2017, Int. J. Appl. Earth Obs. Geoinformation.

[49]  E. Næsset Airborne laser scanning as a method in operational forest inventory: Status of accuracy assessments accomplished in Scandinavia , 2007 .

[50]  P. Radtke,et al.  Detailed Stem Measurements of Standing Trees from Ground-Based Scanning Lidar , 2006, Forest Science.

[51]  Terje Gobakken,et al.  Inference for lidar-assisted estimation of forest growing stock volume , 2013 .