A simple strategy for investigating the diversity and hydrocarbon degradation abilities of cultivable bacteria from contaminated soil

[1]  K. Márialigeti,et al.  Diversity, activity, antibiotic and heavy metal resistance of bacteria from petroleum hydrocarbon contaminated soils located in Harghita County (Romania) , 2012 .

[2]  Andrea Puškárová,et al.  A multiphasic approach for investigation of the microbial diversity and its biodegradative abilities in historical paper and parchment documents , 2012 .

[3]  M. Afzal,et al.  The Inoculation Method Affects Colonization and Performance of Bacterial Inoculant Strains in the Phytoremediation of Soil Contaminated with Diesel Oil , 2012, International journal of phytoremediation.

[4]  E. Parellada,et al.  Squamocin mode of action to stimulate biofilm formation of Pseudomonas plecoglossicida J26, a PAHs degrading bacterium , 2011 .

[5]  J. Tiedje,et al.  Comparison of the Specificities and Efficacies of Primers for Aromatic Dioxygenase Gene Analysis of Environmental Samples , 2011, Applied and Environmental Microbiology.

[6]  Carla C. C. R. de Carvalho,et al.  Bioaugmentation and biostimulation strategies to improve the effectiveness of bioremediation processes , 2011, Biodegradation.

[7]  I. Morelli,et al.  Isolation and characterization of indigenous soil bacteria for bioaugmentation of PAH contaminated soil of semiarid Patagonia, Argentina , 2011 .

[8]  M. Afzal,et al.  Hydrocarbon degradation and plant colonization by selected bacterial strains isolated from Italian ryegrass and birdsfoot trefoil , 2010, Journal of applied microbiology.

[9]  Y. Wong,et al.  Biodegradation ability and dioxgenase genes of PAH-degrading Sphingomonas and Mycobacterium strains isolated from mangrove sediments. , 2010 .

[10]  L. Ciric,et al.  Hydrocarbon utilization within a diesel-degrading bacterial consortium. , 2010, FEMS microbiology letters.

[11]  V. Gupta,et al.  Characterization of 2T engine oil degrading indigenous bacteria, isolated from high altitude (Mussoorie), India , 2010 .

[12]  K. Chovanová,et al.  Application of fluorescence internal transcribed spacer-PCR (f-ITS) for the cluster analysis of bacteria isolated from air and deteriorated fresco surfaces , 2009 .

[13]  Isis Serrano Silva,et al.  Bioremediation of a polyaromatic hydrocarbon contaminated soil by native soil microbiota and bioaugmentation with isolated microbial consortia. , 2009, Bioresource technology.

[14]  A. K. Haritash,et al.  Biodegradation aspects of polycyclic aromatic hydrocarbons (PAHs): a review. , 2009, Journal of hazardous materials.

[15]  B. Maliszewska-Kordybach,et al.  Concentrations, sources, and spatial distribution of individual polycyclic aromatic hydrocarbons (PAHs) in agricultural soils in the Eastern part of the EU: Poland as a case study. , 2009, The Science of the total environment.

[16]  A. Stolz Molecular characteristics of xenobiotic-degrading sphingomonads , 2009, Applied Microbiology and Biotechnology.

[17]  Petrović Olga,et al.  Screening method for detection of hydrocarbon-oxidizing bacteria in oil-contaminated water and soil specimens. , 2008, Journal of microbiological methods.

[18]  M. D. Aitken,et al.  Effects of enrichment with salicylate on bacterial selection and PAH mineralization in a microbial community from a bioreactor treating contaminated soil. , 2008, Environmental science & technology.

[19]  J. Oakeshott,et al.  Bacterial metabolism of polycyclic aromatic hydrocarbons: strategies for bioremediation , 2008, Indian Journal of Microbiology.

[20]  Y. Matsumiya,et al.  Phylogenetic analysis of long-chain hydrocarbon-degrading bacteria and evaluation of their hydrocarbon-degradation by the 2,6-DCPIP assay , 2008, Biodegradation.

[21]  Qi Li,et al.  Biodegradation of aged polycyclic aromatic hydrocarbons (PAHs) by microbial consortia in soil and slurry phases. , 2008, Journal of hazardous materials.

[22]  A. Wentzel,et al.  Bacterial metabolism of long-chain n-alkanes , 2007, Applied Microbiology and Biotechnology.

[23]  R. Norman,et al.  Microbial Dioxygenase Gene Population Shifts during Polycyclic Aromatic Hydrocarbon Biodegradation , 2006, Applied and Environmental Microbiology.

[24]  J. González-López,et al.  Selection and identification of bacteria isolated from waste crude oil with polycyclic aromatic hydrocarbons removal capacities. , 2006, Systematic and applied microbiology.

[25]  P. Spellman,et al.  Drosophila host defense after oral infection by an entomopathogenic Pseudomonas species. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[26]  S. Agathos,et al.  Is bioaugmentation a feasible strategy for pollutant removal and site remediation? , 2005, Current opinion in microbiology.

[27]  L. Gianfreda,et al.  Bacterial communities and enzyme activities of PAHs polluted soils. , 2004, Chemosphere.

[28]  C. Nakatsu,et al.  Detection and Enumeration of Aromatic Oxygenase Genes by Multiplex and Real-Time PCR , 2003, Applied and Environmental Microbiology.

[29]  K. Jirasripongpun The characterization of oil‐degrading microorganisms from lubricating oil contaminated (scale) soil , 2002, Letters in applied microbiology.

[30]  O. Singh,et al.  Polycyclic aromatic hydrocarbons: environmental pollution and bioremediation. , 2002, Trends in biotechnology.

[31]  R. Burns,et al.  Enrichment versus biofilm culture: a functional and phylogenetic comparison of polycyclic aromatic hydrocarbon-degrading microbial communities. , 2002, Environmental microbiology.

[32]  E. Singer,et al.  Pseudomonas brenneri sp. nov., a new species isolated from natural mineral waters. , 2001, Research in microbiology.

[33]  G. Lloyd-Jones,et al.  Quantification of phnAc andnahAc in Contaminated New Zealand Soils by Competitive PCR , 2000, Applied and Environmental Microbiology.

[34]  E. Madsen,et al.  In Situ, Real-Time Catabolic Gene Expression: Extraction and Characterization of Naphthalene Dioxygenase mRNA Transcripts from Groundwater , 1999, Applied and Environmental Microbiology.

[35]  H. Lehväslaiho,et al.  Cloning, nucleotide sequence and characterization of genes encoding naphthalene dioxygenase of Pseudomonas putida strain NCIB9816. , 1988, Gene.

[36]  N. Saitou,et al.  The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.

[37]  M. Kimura A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences , 1980, Journal of Molecular Evolution.

[38]  V. Milanović,et al.  Effects of biostimulation and bioaugmentation on diesel removal and bacterial community , 2012 .

[39]  L. Dendooven,et al.  Microbial communities to mitigate contamination of PAHs in soil—possibilities and challenges: a review , 2011, Environmental science and pollution research international.

[40]  Sang-Hong Yoon,et al.  Pseudomonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea. , 2003, International journal of systematic and evolutionary microbiology.

[41]  M. Kubo,et al.  Biodegradation of n-alkylcyclohexanes by co-oxidation via multiple pathways in Acinetobacter sp. ODDK71. , 2003, Journal of bioscience and bioengineering.

[42]  R. Naidu,et al.  Bioremediation of high molecular weight polycyclic aromatic hydrocarbons: a review of the microbial degradation of benzo[a]pyrene. , 2000 .

[43]  H. Wakabayashi,et al.  Pseudomonas plecoglossicida sp. nov., the causative agent of bacterial haemorrhagic ascites of ayu, Plecoglossus altivelis. , 2000, International journal of systematic and evolutionary microbiology.

[44]  D. Lane 16S/23S rRNA sequencing , 1991 .