Experimental design suboptimization for the enzyme-catalytic nonlinear time-delay system in microbial batch culture

In this paper, an enzyme-catalytic nonlinear time-delay system is investigated to describe the batch culture of glycerol to 1,3-propanediol (1,3-PD) by Klebsiella pneumoniae (K. pneumoniae), in which glycerol and 1,3-PD are assumed to pass the cell membrane by passive diffusion coupled with facilitated transport. The existence, uniqueness, boundness of solutions of the system and continuity of solutions with respect to the uncertain parameter appeared in the studied system are also discussed. The purpose of this article is to maximize the productivity of 1,3-PD at terminal time by controlling the initial value of the state vector and terminal time. With this in mind, taking the productivity of 1,3-PD at terminal time as the cost function and the initial concentration of biomass, glycerol, and terminal time as the control vectors, we firstly propose an optimal control model subject to the time-delay system and continuous state inequality constraints. To seek the optimal productivity of 1,3-PD at terminal time and the optimal control, a modified Nelder–Mead algorithm involved with the constraint transcription and smoothing techniques is then developed. Finally, the numerical results illustrate the appropriateness of the enzyme-catalytic nonlinear dynamic system and the validity of the optimization algorithm.

[1]  L. Glass,et al.  Oscillation and chaos in physiological control systems. , 1977, Science.

[2]  John A. Nelder,et al.  A Simplex Method for Function Minimization , 1965, Comput. J..

[3]  Wang Zong-tao,et al.  Parameter identification and optimization of process for bio-dissimilation of glycerol to 1,3-propanediol in batch culture , 2006 .

[4]  Enmin Feng,et al.  Modeling nonlinear stochastic kinetic system and stochastic optimal control of microbial bioconversion process in batch culture , 2013 .

[5]  Enmin Feng,et al.  Complex metabolic network of glycerol fermentation by Klebsiella pneumoniae and its system identification via biological robustness , 2011 .

[6]  Zhilong Xiu,et al.  Mathematical modeling of glycerol fermentation by Klebsiella pneumoniae: Concerning enzyme-catalytic reductive pathway and transport of glycerol and 1,3-propanediol across cell membrane , 2008 .

[7]  Behzad Moshiri,et al.  Optimal control of a nonlinear fed-batch fermentation process using model predictive approach , 2009 .

[8]  Jean Charles Gilbert,et al.  Numerical Optimization: Theoretical and Practical Aspects , 2003 .

[9]  A. Zeng,et al.  Kinetic, dynamic, and pathway studies of glycerol metabolism by Klebsiella pneumoniae in anaerobic continuous culture: II. Analysis of metabolic rates and pathways under oscillation and steady‐state conditions , 2000, Biotechnology and bioengineering.

[10]  Kok Lay Teo,et al.  Robust suboptimal control of nonlinear systems , 2011, Appl. Math. Comput..

[11]  Mahmood Joorabian,et al.  Optimal power flow under both normal and contingent operation conditions using the hybrid fuzzy particle swarm optimisation and Nelder-Mead algorithm (HFPSO-NM) , 2014, Appl. Soft Comput..

[12]  Lei Wang Modelling and Regularity of Nonlinear Impulsive Switching Dynamical System in Fed-Batch Culture , 2012 .

[13]  Enmin Feng,et al.  An improved model for multistage simulation of glycerol fermentation in batch culture and its parameter identification , 2009 .

[14]  Enmin Feng,et al.  The Optimal Properties of Nonlinear Bilevel Multi-stage Dynamic System , 2006, 2006 6th World Congress on Intelligent Control and Automation.

[15]  Kok Lay Teo,et al.  A Unified Computational Approach to Optimal Control Problems , 1991 .

[16]  Enmin Feng,et al.  Modelling and pathway identification involving the transport mechanism of a complex metabolic system in batch culture , 2014, Commun. Nonlinear Sci. Numer. Simul..

[17]  A. Zeng,et al.  A kinetic model for product formation of microbial and mammalian cells , 1995, Biotechnology and bioengineering.

[18]  Chongyang Liu,et al.  From the SelectedWorks of Chongyang Liu 2013 Modelling and parameter identification for a nonlinear time-delay system in microbial batch fermentation , 2017 .

[19]  Enmin Feng,et al.  Modeling and identification of a nonlinear hybrid dynamical system in batch fermentation of glycerol , 2011, Math. Comput. Model..

[20]  K. A. Murphy Estimation of time- and state-dependent delays and other parameters in functional differential equations , 1990 .

[21]  Ryan C. Loxton,et al.  Robust Optimal Control of a Microbial Batch Culture Process , 2015, J. Optim. Theory Appl..

[22]  Enmin Feng,et al.  Sensitivity analysis and identification of kinetic parameters in batch fermentation of glycerol , 2012, J. Comput. Appl. Math..

[23]  Mei Song,et al.  Global stability of an SIR epidemicmodel with time delay , 2004, Appl. Math. Lett..

[24]  J. Renaud Numerical Optimization, Theoretical and Practical Aspects— , 2006, IEEE Transactions on Automatic Control.

[25]  Jerald Hendrix,et al.  A theoretical and empirical investigation of delayed growth response in the continuous culture of bacteria. , 2003, Journal of theoretical biology.

[26]  Kok Lay Teo,et al.  A computational method for combined optimal parameter selection and optimal control problems with general constraints , 1989, The Journal of the Australian Mathematical Society. Series B. Applied Mathematics.

[27]  Vladimir L. Kharitonov,et al.  Stability of Time-Delay Systems , 2003, Control Engineering.

[28]  Zhaohua Gong,et al.  Optimal Control of Switched Systems Arising in Fermentation Processes , 2014 .

[29]  A. Zeng,et al.  A Kinetic Model for Substrate and Energy Consumption of Microbial Growth under Substrate‐Sufficient Conditions , 1995, Biotechnology progress.

[30]  Lei Wang,et al.  Determining the transport mechanism of an enzyme-catalytic complex metabolic network based on biological robustness , 2013, Bioprocess and Biosystems Engineering.

[31]  A. Feuer,et al.  Time delay estimation in continuous linear time-invariant systems , 1994, IEEE Trans. Autom. Control..

[32]  I. D. Coope,et al.  A Convergent Variant of the Nelder–Mead Algorithm , 2002 .

[33]  An Li,et al.  Mathematical modeling of kinetics and research on multiplicity of glycerol bioconversion to 1,3-propanediol , 2000 .

[34]  K. I. M. McKinnon,et al.  Convergence of the Nelder-Mead Simplex Method to a Nonstationary Point , 1998, SIAM J. Optim..

[35]  Václav Snásel,et al.  The Nelder-Mead Simplex Method with Variables Partitioning for Solving Large Scale Optimization Problems , 2013, IBICA.

[36]  Saša Singer,et al.  Efficient Implementation of the Nelder–Mead Search Algorithm , 2004 .

[37]  Enmin Feng,et al.  Optimal Control for Multistage Nonlinear Dynamic System of Microbial Bioconversion in Batch Culture , 2011, J. Appl. Math..

[38]  Zhaohua Gong,et al.  Optimal control and properties of nonlinear multistage dynamical system for planning horizontal well paths , 2009 .