论文信息 - Model preparation in MOLREP and examples of model improvement using X-ray data

Model preparation in MOLREP and examples of model improvement using X-ray data

The default model-preparation scheme of MOLREP is described. Two examples are presented of model improvement using X-ray data.

[1] A. Vagin,et al. MOLREP: an Automated Program for Molecular Replacement , 1997 .

[2] R. Huber,et al. An Analytical Packing Function Employing Fourier Transforms , 1991 .

[3] A. Antson,et al. Papillomavirus E1 helicase assembly maintains an asymmetric state in the absence of DNA and nucleotide cofactors , 2007, Nucleic acids research.

[4] S. B. Needleman,et al. A general method applicable to the search for similarities in the amino acid sequence of two proteins. , 1970, Journal of molecular biology.

[5] A G Murzin,et al. SCOP: a structural classification of proteins database for the investigation of sequences and structures. , 1995, Journal of molecular biology.

[6] A. Sali,et al. Modeller: generation and refinement of homology-based protein structure models. , 2003, Methods in enzymology.

[7] J. Navaza,et al. AMoRe: an automated package for molecular replacement , 1994 .

[8] Manuel C. Peitsch,et al. SWISS-MODEL: an automated protein homology-modeling server , 2003, Nucleic Acids Res..

[9] 良二上田. J. Appl. Cryst.の発刊に際して , 1970 .

[10] C. Chothia. One thousand families for the molecular biologist , 1992, Nature.

[11] R. Rosenfeld. Nature , 2009, Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery.

[12] B. Lee,et al. The interpretation of protein structures: estimation of static accessibility. , 1971, Journal of molecular biology.