Whole genome sequencing of Mycobacterium tuberculosis
暂无分享,去创建一个
Stefan Niemann | Timothy M. Walker | Daniela M. Cirillo | S. Niemann | T. Walker | D. Cirillo | Andrea M. Cabibbe | A. Cabibbe
[1] S. Niemann,et al. Aiming for zero tuberculosis transmission in low-burden countries. , 2017, The Lancet. Respiratory medicine.
[2] Whole-Genome Sequencing for Drug Resistance Profile Prediction in Mycobacterium tuberculosis , 2019, Antimicrobial Agents and Chemotherapy.
[3] D. Chin,et al. Genetic sequencing for surveillance of drug resistance in tuberculosis in highly endemic countries: a multi-country population-based surveillance study , 2018, The Lancet. Infectious diseases.
[4] N Woodford,et al. The role of whole genome sequencing in antimicrobial susceptibility testing of bacteria: report from the EUCAST Subcommittee. , 2017, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
[6] Zhaogang Sun,et al. Treating tuberculosis with high doses of anti-TB drugs: mechanisms and outcomes , 2017, Annals of Clinical Microbiology and Antimicrobials.
[7] M. Pai,et al. Real-Time Sequencing of Mycobacterium tuberculosis: Are We There Yet? , 2017, Journal of Clinical Microbiology.
[8] J. G. Patton,et al. Strain-specific suppression of microRNA-320 by carcinogenic Helicobacter pylori promotes expression of the antiapoptotic protein Mcl-1. , 2013, American journal of physiology. Gastrointestinal and liver physiology.
[9] T. Clark,et al. Removing the bottleneck in whole genome sequencing of Mycobacterium tuberculosis for rapid drug resistance analysis: a call to action. , 2017, International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases.
[10] N. Segata,et al. The new phylogeny of the genus Mycobacterium: The old and the news. , 2017, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.
[11] D. van Soolingen,et al. WGS more accurately predicts susceptibility of Mycobacterium tuberculosis to first-line drugs than phenotypic testing. , 2019, The Journal of antimicrobial chemotherapy.
[12] L. Chindelevitch,et al. Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase , 2018, Scientific Reports.
[13] S. Niemann,et al. Isoniazid resistance in Mycobacterium tuberculosis is a heterogeneous phenotype comprised of overlapping MIC distributions with different underlying resistance mechanisms , 2019, bioRxiv.
[14] Joanne R. Winter,et al. Interpreting whole genome sequencing for investigating tuberculosis transmission: a systematic review , 2016, BMC Medicine.
[15] Nalin Rastogi,et al. Evolutionary history and global spread of the Mycobacterium tuberculosis Beijing lineage , 2015, Nature Genetics.
[16] Stefan Niemann,et al. Mycobacterium tuberculosis resistance prediction and lineage classification from genome sequencing: comparison of automated analysis tools , 2017, Scientific Reports.
[17] T. Clark,et al. Use of whole genome sequencing in surveillance of drug resistant tuberculosis , 2018, Expert review of anti-infective therapy.
[18] S. Niemann,et al. Whole Genome Sequencing Reveals Complex Evolution Patterns of Multidrug-Resistant Mycobacterium tuberculosis Beijing Strains in Patients , 2013, PloS one.
[19] Phelim Bradley,et al. Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study , 2015, The Lancet. Infectious diseases.
[20] Phelim Bradley,et al. DNA Sequencing Predicts 1st-Line Tuberculosis Drug Susceptibility Profiles , 2018, The New England journal of medicine.
[21] G. Sotgiu,et al. Genotypic and phenotypic M. tuberculosis resistance: guiding clinicians to prescribe the correct regimens , 2017, European Respiratory Journal.
[22] Tamara Munzner,et al. Evidence-based design and evaluation of a whole genome sequencing clinical report for the reference microbiology laboratory , 2017, bioRxiv.
[23] G. Weinstock,et al. Making the Leap from Research Laboratory to Clinic: Challenges and Opportunities for Next-Generation Sequencing in Infectious Disease Diagnostics , 2015, mBio.
[24] J Moran-Gilad,et al. Practical issues in implementing whole-genome-sequencing in routine diagnostic microbiology. , 2017, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
[25] M. Huynen,et al. Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis , 2017, Clinical Microbiology Reviews.
[26] G. Rossolini,et al. Countrywide implementation of whole genome sequencing: an opportunity to improve tuberculosis management, surveillance and contact tracing in low incidence countries , 2018, European Respiratory Journal.
[27] E Trees,et al. Next-generation sequencing technologies and their application to the study and control of bacterial infections. , 2017, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
[28] K. Steingart,et al. Diagnostic Accuracy and Reproducibility of WHO-Endorsed Phenotypic Drug Susceptibility Testing Methods for First-Line and Second-Line Antituberculosis Drugs , 2012, Journal of Clinical Microbiology.
[29] Phelim Bradley,et al. Same-Day Diagnostic and Surveillance Data for Tuberculosis via Whole-Genome Sequencing of Direct Respiratory Samples , 2016, Journal of Clinical Microbiology.
[30] S. Niemann,et al. Whole genome sequencing for M/XDR tuberculosis surveillance and for resistance testing. , 2017, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
[31] Diogo F. Veiga,et al. Genome-Wide Discovery of Small RNAs in Mycobacterium tuberculosis , 2012, PloS one.
[32] D. Cirillo,et al. EUSeqMyTB to set standards and build capacity for whole genome sequencing for tuberculosis in the EU. , 2018, The Lancet. Infectious diseases.
[33] Thomas R Rogers,et al. Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study , 2016, The Lancet. Respiratory medicine.
[34] John Crandall,et al. Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory , 2017, Journal of Clinical Microbiology.
[35] Ruth McNerney,et al. A standardised method for interpreting the association between mutations and phenotypic drug resistance in Mycobacterium tuberculosis , 2017, European Respiratory Journal.
[36] T. de Oliveira,et al. Mycobacterium tuberculosis Next-Generation Whole Genome Sequencing: Opportunities and Challenges , 2018, Tuberculosis research and treatment.
[37] F. Baquero. Low-level antibacterial resistance: a gateway to clinical resistance. , 2001, Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy.
[38] Stefan Niemann,et al. Whole-Genome-Based Mycobacterium tuberculosis Surveillance: a Standardized, Portable, and Expandable Approach , 2014, Journal of Clinical Microbiology.
[39] Pascal Lapierre,et al. Comprehensive Whole-Genome Sequencing and Reporting of Drug Resistance Profiles on Clinical Cases of Mycobacterium tuberculosis in New York State , 2017, Journal of Clinical Microbiology.