Transcriptomic and proteomic profiling reveals toxicity and molecular action mechanisms of bioengineered chitosan‑iron nanocomposites against Xanthomonas oryzae pv. oryzae.

[1]  Yan Huang,et al.  Transcriptomic and Proteomic Analysis of Gardnerella vaginalis Responding to Acidic pH and Hydrogen Peroxide Stress , 2023, Microorganisms.

[2]  Hai Xu,et al.  Comparative Analysis of Transcriptomic Response of Escherichia coli K-12 MG1655 to Nine Representative Classes of Antibiotics , 2023, Microbiology spectrum.

[3]  Y. Qian,et al.  Study on spoilage potential and its molecular basis of Shewanella putrefaciens in response to cold conditions by Label-free quantitative proteomic analysis , 2022, World Journal of Microbiology and Biotechnology.

[4]  N. Yadav,et al.  Recent development in nanoencapsulation and delivery of natural bioactives through chitosan scaffolds for various biological applications. , 2022, International journal of biological macromolecules.

[5]  Fang Wang,et al.  Phage Resistance Reduced the Pathogenicity of Xanthomonas oryzae pv. oryzae on Rice , 2022, Viruses.

[6]  Md. Arshad Ali,et al.  Bioengineered chitosan-iron nanocomposite controls bacterial leaf blight disease by modulating plant defense response and nutritional status of rice (Oryza sativa L.) , 2022, Nano Today.

[7]  Wei Zhang,et al.  Proteomic Analysis Unravels Response and Antioxidation Defense Mechanism of Rice Plants to Copper Oxide Nanoparticles: Comparison with Bulk Particles and Dissolved Cu Ions , 2022, ACS Agricultural Science & Technology.

[8]  R. Oliva,et al.  Molecular characterization and screening of Xanthomonas oryzae pv. oryzae, isolated from Pakistan for prediction of bacterial leaf blight-resistant basmati rice , 2022, Physiological and Molecular Plant Pathology.

[9]  Zhichao Jin,et al.  New Axially Chiral Molecular Scaffolds with Antibacterial Activities against Xanthomonas oryzae pv. oryzae for Protection of Rice. , 2022, Journal of agricultural and food chemistry.

[10]  Dayong Li,et al.  Microbe-oriented nanoparticles as phytomedicines for plant health management: An emerging paradigm to achieve global food security , 2022, Critical reviews in food science and nutrition.

[11]  B. C. Viraktamath,et al.  Genetic Improvement of Rice for Bacterial Blight Resistance: Present Status and Future Prospects , 2022, Rice Science.

[12]  Ping Li,et al.  N-terminal HrpE from Xanthomonas oryzae pv. oryzae mediates the regulation of growth and photosynthesis in rice , 2022, Plant Growth Regulation.

[13]  J. Moon,et al.  Whole genome and RNA sequencing of oral commensal bacterium Streptococcus anginosus subsp. anginosus with vancomycin tolerance , 2022, Journal of Microbiology.

[14]  M. Fan,et al.  Integrated transcriptomic and proteomic analysis reveals the response mechanisms of Alicyclobacillus acidoterrestris to heat stress. , 2021, Food research international.

[15]  W. Feng,et al.  Nano-enabled agrochemicals/materials: Potential human health impact, risk assessment, management strategies and future prospects. , 2021, Environmental pollution.

[16]  Soon-Wook Kwon,et al.  Comparative proteome profiling of susceptible and resistant rice cultivars identified an arginase involved in rice defense against Xanthomonas oryzae pv. oryzae. , 2021, Plant physiology and biochemistry : PPB.

[17]  Xiaoyan Li,et al.  Comparative transcriptomic analysis reveals the molecular mechanisms related to oxytetracycline- resistance in strains of Aeromonas hydrophila , 2021 .

[18]  Hongman Zhang,et al.  Antibacterial mechanism and transcriptome analysis of ultra-small gold nanoclusters as an alternative of harmful antibiotics against Gram-negative bacteria. , 2021, Journal of hazardous materials.

[19]  M. Noman,et al.  Green magnesium oxide nanoparticles-based modulation of cellular oxidative repair mechanisms to reduce arsenic uptake and translocation in rice (Oryza sativa L.) plants. , 2021, Environmental pollution.

[20]  B. D. Mattos,et al.  Foliage adhesion and interactions with particulate delivery systems for plant nanobionics and intelligent agriculture , 2021 .

[21]  S. Senthil-Nathan,et al.  Seed treatment and foliar application of methyl salicylate (MeSA) as a defense mechanism in rice plants against the pathogenic bacterium, Xanthomonas oryzae pv. oryzae. , 2020, Pesticide biochemistry and physiology.

[22]  Md. Arshad Ali,et al.  The Bio-Synthesis of Three Metal Oxide Nanoparticles (ZnO, MnO2, and MgO) and Their Antibacterial Activity Against the Bacterial Leaf Blight Pathogen , 2020, Frontiers in Microbiology.

[23]  T. Ahmed,et al.  Biosynthesis of Silver Nanoparticles Using Onion Endophytic Bacterium and Its Antifungal Activity against Rice Pathogen Magnaporthe oryzae , 2020, Journal of fungi.

[24]  P. Mandal,et al.  Applications of chitosan and chitosan based metallic nanoparticles in agrosciences-A review. , 2020, International journal of biological macromolecules.

[25]  C. Pascoal,et al.  Transcriptomics reveals the action mechanisms and cellular targets of citrate-coated silver nanoparticles in a ubiquitous aquatic fungus. , 2020, Environmental pollution.

[26]  P. Barah,et al.  Temperature differentially modulates the transcriptome response in Oryza sativa to Xanthomonas oryzae pv. oryzae infection. , 2020, Genomics.

[27]  Xinhua Lin,et al.  Quaternary ammonium carbon quantum dots as an antimicrobial agent against gram-positive bacteria for the treatment of MRSA-infected pneumonia in mice , 2020 .

[28]  Guojun Wu,et al.  Quantitative proteomics reveals the mechanism of silver nanoparticles against multidrug-resistant Pseudomonas aeruginosa biofilm. , 2020, Journal of proteome research.

[29]  Md. Arshad Ali,et al.  Advancements in Plant and Microbe-Based Synthesis of Metallic Nanoparticles and Their Antimicrobial Activity against Plant Pathogens , 2020, Nanomaterials.

[30]  F. White,et al.  Xanthomonas diversity, virulence and plant–pathogen interactions , 2020, Nature Reviews Microbiology.

[31]  M. Noman,et al.  Silver Nanoparticles Synthesized by Using Bacillus cereus SZT1 Ameliorated the Damage of Bacterial Leaf Blight Pathogen in Rice , 2020, Pathogens.

[32]  E. Calabrese,et al.  Nano-pesticides: A great challenge for biodiversity? The need for a broader perspective , 2020 .

[33]  B. Baker,et al.  Biological control and integrated pest management in organic and conventional systems , 2020, Biological Control.

[34]  F. Tian,et al.  Transcriptional responses of Xanthomonas oryzae pv. oryzae to type III secretion system inhibitor ortho-coumaric acid , 2019, BMC Microbiology.

[35]  K. Paknikar,et al.  RNA-sequencing reveals a multitude of effects of silver nanoparticles on Pseudomonas aeruginosa biofilms , 2019, Environmental Science: Nano.

[36]  J. White,et al.  Nano-enabled strategies to enhance crop nutrition and protection , 2019, Nature Nanotechnology.

[37]  Guojun Wu,et al.  Antibacterial activity and mechanism of silver nanoparticles against multidrug-resistant Pseudomonas aeruginosa , 2019, International journal of nanomedicine.

[38]  Muchen Zhang,et al.  Green synthesis of zinc oxide nanoparticles using different plant extracts and their antibacterial activity against Xanthomonas oryzae pv. oryzae , 2019, Artificial cells, nanomedicine, and biotechnology.

[39]  Yinguang Chen,et al.  Comprehensive analysis of transcriptional and proteomic profiling reveals silver nanoparticles-induced toxicity to bacterial denitrification. , 2018, Journal of hazardous materials.

[40]  Weiyun Wang,et al.  Transcriptome Analysis Reveals Silver Nanoparticle-Decorated Quercetin Antibacterial Molecular Mechanism. , 2017, ACS applied materials & interfaces.

[41]  Jibin Sun,et al.  Complete genome sequence and transcriptomic analysis of a novel marine strain Bacillus weihaiensis reveals the mechanism of brown algae degradation , 2016, Scientific Reports.

[42]  D. Richardson,et al.  Antimicrobial Effects of Free Nitrous Acid on Desulfovibrio vulgaris: Implications for Sulfide-Induced Corrosion of Concrete , 2016, Applied and Environmental Microbiology.

[43]  Amr T. M. Saeb,et al.  A Review on Antimicrobial Chitosan-Silver Nanocomposites: A Roadmap Toward Pathogen Targeted Synthesis , 2015 .

[44]  W. Huber,et al.  which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets , 2011 .

[45]  M. Gerstein,et al.  RNA-Seq: a revolutionary tool for transcriptomics , 2009, Nature Reviews Genetics.

[46]  Thomas D. Schmittgen,et al.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.

[47]  M. M. Bradford.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. , 1976, Analytical biochemistry.