Methods for Tractography-Driven Surface Registration of Brain Structures

Registration of brain structures should bring anatomically equivalent areas into correspondence which is usually done using information from structural MRI modalities. Correspondence can be improved by using other image modalities that provide complementary data. In this paper we propose and evaluate two novel surface registration algorithms which improve within-surface correspondence in brain structures. Both approaches use a white-matter tract similarity function (derived from probabilistic tractography) to match areas of similar connectivity patterns. The two methods differ in the way the deformation field is calculated and in how the multi-scale registration framework is implemented. We validated both algorithms using artificial and real image examples, in both cases showing high registration consistency and the ability to find differences in thalamic sub-structures between Alzheimer's disease and control subjects. The results suggest differences in thalamic connectivity predominantly in the medial dorsal parts of the left thalamus.

[1]  Timothy Edward John Behrens,et al.  Characterization and propagation of uncertainty in diffusion‐weighted MR imaging , 2003, Magnetic resonance in medicine.

[2]  Mark W. Woolrich,et al.  Bayesian analysis of neuroimaging data in FSL , 2009, NeuroImage.

[3]  Timothy Edward John Behrens,et al.  Functional-anatomical validation and individual variation of diffusion tractography-based segmentation of the human thalamus. , 2005, Cerebral cortex.

[4]  E K Perry,et al.  Nerve cell loss in the thalamus in Alzheimer's disease and Parkinson's disease. , 1991, Brain : a journal of neurology.

[5]  A. Schleicher,et al.  Broca's region revisited: Cytoarchitecture and intersubject variability , 1999, The Journal of comparative neurology.

[6]  Yuan Qi,et al.  Cortical Surface Shape Analysis Based on Spherical Wavelets , 2007, IEEE Transactions on Medical Imaging.

[7]  Peter Schröder,et al.  Spherical wavelets: efficiently representing functions on the sphere , 1995, SIGGRAPH.

[8]  Daniel Rueckert,et al.  Tract-based spatial statistics: Voxelwise analysis of multi-subject diffusion data , 2006, NeuroImage.

[9]  Mark Jenkinson,et al.  A consistent relationship between local white matter architecture and functional specialisation in medial frontal cortex , 2006, NeuroImage.

[10]  Jean-Francois Mangin,et al.  Registration of Cortical Connectivity Matrices , 2006, 2006 Conference on Computer Vision and Pattern Recognition Workshop (CVPRW'06).

[11]  Stephen M Smith,et al.  Fast robust automated brain extraction , 2002, Human brain mapping.

[12]  Stephen M. Smith,et al.  Robust automated brain extraction , 2000, NeuroImage.

[13]  William H. Press,et al.  Numerical Recipes in C, 2nd Edition , 1992 .

[14]  Peter Schröder,et al.  Spherical Wavelets: Texture Processing , 1995, Rendering Techniques.

[15]  Aaron F. Bobick,et al.  Multiscale 3-D Shape Representation and Segmentation Using Spherical Wavelets , 2007, IEEE Transactions on Medical Imaging.