A method for hand-foot-mouth disease prediction using GeoDetector and LSTM model in Guangxi, China

Hand-foot-mouth disease (HFMD) is a common infectious disease in children and is particularly severe in Guangxi, China. Meteorological conditions are known to play a pivotal role in the HFMD. Previous studies have reported numerous models to predict the incidence of HFMD. In this study, we proposed a new method for the HFMD prediction using GeoDetector and a Long Short-Term Memory neural network (LSTM). The daily meteorological factors and HFMD records in Guangxi during 2014–2015 were adopted. First, potential risk factors for the occurrence of HFMD were identified based on the GeoDetector. Then, region-specific prediction models were developed in 14 administrative regions of Guangxi, China using an optimized three-layer LSTM model. Prediction results (the R-square ranges from 0.39 to 0.71) showed that the model proposed in this study had a good performance in HFMD predictions. This model could provide support for the prevention and control of HFMD. Moreover, this model could also be extended to the time series prediction of other infectious diseases.

[1]  Tonglin Zhang,et al.  A measure of spatial stratified heterogeneity , 2016 .

[2]  Zongben Xu,et al.  $L_{1/2}$ Regularization: A Thresholding Representation Theory and a Fast Solver , 2012, IEEE Transactions on Neural Networks and Learning Systems.

[3]  Marios Anthimopoulos,et al.  Lung Pattern Classification for Interstitial Lung Diseases Using a Deep Convolutional Neural Network , 2016, IEEE Transactions on Medical Imaging.

[4]  Shicheng Yu,et al.  Spatial-temporal mapping of hand foot and mouth disease and the long-term effects associated with climate and socio-economic variables in Sichuan Province, China from 2009 to 2013. , 2016, The Science of the total environment.

[5]  George Christakos,et al.  Hand, foot and mouth disease: spatiotemporal transmission and climate , 2011, International journal of health geographics.

[6]  Jian Cheng,et al.  Associations between extreme precipitation and childhood hand, foot and mouth disease in urban and rural areas in Hefei, China. , 2014, The Science of the total environment.

[7]  Qiyong Liu,et al.  The Effect of Meteorological Variables on the Transmission of Hand, Foot and Mouth Disease in Four Major Cities of Shanxi Province, China: A Time Series Data Analysis (2009-2013) , 2015, PLoS neglected tropical diseases.

[8]  W. Liu,et al.  Circulation of Coxsackievirus A10 and A6 in Hand-Foot-Mouth Disease in China, 2009–2011 , 2012, PloS one.

[9]  M. Hashizume,et al.  The influence of temperature and humidity on the incidence of hand, foot, and mouth disease in Japan. , 2011, The Science of the total environment.

[10]  B. Chun,et al.  Effect of Climatic Factors on Hand, Foot, and Mouth Disease in South Korea, 2010-2013 , 2016, PloS one.

[11]  Mehdi Khashei,et al.  Improvement of Auto-Regressive Integrated Moving Average models using Fuzzy logic and Artificial Neural Networks (ANNs) , 2009, Neurocomputing.

[12]  Y. Liao,et al.  A study of spatiotemporal delay in hand, foot and mouth disease in response to weather variations based on SVD: a case study in Shandong Province, China , 2015, BMC Public Health.

[13]  Wangjian Zhang,et al.  Predicting the hand, foot, and mouth disease incidence using search engine query data and climate variables: an ecological study in Guangdong, China , 2017, BMJ Open.

[14]  Yuan Yao,et al.  A paired neural network model for tourist arrival forecasting , 2018, Expert Syst. Appl..

[15]  Jing Liu,et al.  Machine Learning Algorithms for Risk Prediction of Severe Hand-Foot-Mouth Disease in Children , 2017, Scientific Reports.

[16]  Patrick Market,et al.  Meteorological conditions are associated with physical activities performed in open-air settings , 2008, International journal of biometeorology.

[17]  E. Druyts-Voets Epidemiological features of entero non-poliovirus isolations in Belgium 1980–94 , 1997, Epidemiology and Infection.

[18]  Ha Young Kim,et al.  ModAugNet: A new forecasting framework for stock market index value with an overfitting prevention LSTM module and a prediction LSTM module , 2018, Expert Syst. Appl..

[19]  Xiaoying Zheng,et al.  Geographical Detectors‐Based Health Risk Assessment and its Application in the Neural Tube Defects Study of the Heshun Region, China , 2010, Int. J. Geogr. Inf. Sci..

[20]  Kow-Tong Chen,et al.  Epidemiologic Features of Hand-Foot-Mouth Disease and Herpangina Caused by Enterovirus 71 in Taiwan, 1998–2005 , 2007, Pediatrics.

[21]  Chengdong Xu Spatio-Temporal Pattern and Risk Factor Analysis of Hand, Foot and Mouth Disease Associated with Under-Five Morbidity in the Beijing–Tianjin–Hebei Region of China , 2017, International journal of environmental research and public health.

[22]  Yilmaz Simsek,et al.  Multidimensional Bernstein polynomials and Bezier curves: Analysis of machine learning algorithm for facial expression recognition based on curvature , 2019, Appl. Math. Comput..

[23]  Yoshua Bengio,et al.  Learning long-term dependencies with gradient descent is difficult , 1994, IEEE Trans. Neural Networks.

[24]  Laurene V. Fausett,et al.  Fundamentals Of Neural Networks , 1994 .

[25]  K. Goh,et al.  Epidemiology and control of hand, foot and mouth disease in Singapore, 2001-2007. , 2009, Annals of the Academy of Medicine, Singapore.

[26]  Wenjie Si,et al.  ECG-based identity recognition via deterministic learning , 2018 .

[27]  Jian Cheng,et al.  Impact of temperature variation between adjacent days on childhood hand, foot and mouth disease during April and July in urban and rural Hefei, China , 2016, International Journal of Biometeorology.

[28]  Yaying Li,et al.  Analysis of Heavy Metal Sources in the Soil of Riverbanks Across an Urbanization Gradient , 2018, International journal of environmental research and public health.

[29]  Ying Peng,et al.  Application of seasonal auto-regressive integrated moving average model in forecasting the incidence of hand-foot-mouth disease in Wuhan, China , 2017, Current Medical Science.

[30]  E. H. Lennette,et al.  An apparently new enterovirus isolated from patients with disease of the central nervous system. , 1974, The Journal of infectious diseases.

[31]  Björn W. Schuller,et al.  Combining Long Short-Term Memory and Dynamic Bayesian Networks for Incremental Emotion-Sensitive Artificial Listening , 2010, IEEE Journal of Selected Topics in Signal Processing.

[32]  Gansen Zhao,et al.  Developing a Machine Learning System for Identification of Severe Hand, Foot, and Mouth Disease from Electronic Medical Record Data , 2017, Scientific Reports.

[33]  J. Chu,et al.  Developments towards antiviral therapies against enterovirus 71 , 2010, Drug Discovery Today.

[34]  Lei Jia,et al.  Non-Linear Association between Exposure to Ambient Temperature and Children’s Hand-Foot-and-Mouth Disease in Beijing, China , 2015, PloS one.

[35]  Ha Young Kim,et al.  Early Forecasting of Rice Blast Disease Using Long Short-Term Memory Recurrent Neural Networks , 2017 .

[36]  Application of seasonal auto-regressive integrated moving average model in forecasting the incidence of hand-foot-mouth disease in Wuhan, China , 2017, Journal of Huazhong University of Science and Technology. Medical sciences = Hua zhong ke ji da xue xue bao. Yi xue Ying De wen ban = Huazhong keji daxue xuebao. Yixue Yingdewen ban.

[37]  Jürgen Schmidhuber,et al.  Long Short-Term Memory , 1997, Neural Computation.

[38]  Chengdong Xu,et al.  Spatiotemporal decomposition and risk determinants of hand, foot and mouth disease in Henan, China. , 2019, The Science of the total environment.

[39]  Qingquan Li,et al.  Geo-detection of factors controlling spatial patterns of heavy metals in urban topsoil using multi-source data. , 2018, The Science of the total environment.

[40]  G. Christakos,et al.  The association between heavy metal soil pollution and stomach cancer: a case study in Hangzhou City, China , 2018, Environmental Geochemistry and Health.

[41]  Hong Chen,et al.  Universal approximation to nonlinear operators by neural networks with arbitrary activation functions and its application to dynamical systems , 1995, IEEE Trans. Neural Networks.

[42]  Chengdong Xu,et al.  Space-time heterogeneity of hand, foot and mouth disease in children and its potential driving factors in Henan, China , 2018, BMC Infectious Diseases.

[43]  Chengdong Xu,et al.  Spatiotemporal risk mapping of hand, foot and mouth disease and its association with meteorological variables in children under 5 years , 2017, Epidemiology and Infection.

[44]  N. Silverberg,et al.  Update on hand-foot-and-mouth disease. , 2015, Clinics in dermatology.

[45]  Kenneth J. Smith,et al.  Forecasting the economic value of an Enterovirus 71 (EV71) vaccine. , 2010, Vaccine.

[46]  Yanchen Bo,et al.  Using an autologistic regression model to identify spatial risk factors and spatial risk patterns of hand, foot and mouth disease (HFMD) in Mainland China , 2014, BMC Public Health.