Optical control of cell signaling by single-chain photoswitchable kinases
暂无分享,去创建一个
Michael Z. Lin | K. Shen | Linlin Z Fan | Michael Z Lin | Kang Shen | Linlin Z. Fan | Pengpeng Li | Xin X Zhou | Pengpeng Li | Xin X. Zhou
[1] G. Murshudov,et al. Refinement of macromolecular structures by the maximum-likelihood method. , 1997, Acta crystallographica. Section D, Biological crystallography.
[2] Emily K. Lehrman,et al. Two Cyclin-Dependent Kinase Pathways Are Essential for Polarized Trafficking of Presynaptic Components , 2010, Cell.
[3] Yi Yang,et al. Spatiotemporal control of gene expression by a light-switchable transgene system , 2012, Nature Methods.
[4] E. Huq,et al. A light-switchable gene promoter system , 2002, Nature Biotechnology.
[5] K. Gardner,et al. An optogenetic gene expression system with rapid activation and deactivation kinetics , 2013, Nature chemical biology.
[6] Josiah P. Zayner,et al. TULIPs: Tunable, light-controlled interacting protein tags for cell biology , 2012, Nature Methods.
[7] M. Baccarini,et al. “RAF” neighborhood: Protein–protein interaction in the Raf/Mek/Erk pathway , 2014, FEBS letters.
[8] W. P. Russ,et al. Surface Sites for Engineering Allosteric Control in Proteins , 2008, Science.
[9] Jared E. Toettcher,et al. Using Optogenetics to Interrogate the Dynamic Control of Signal Transmission by the Ras/Erk Module , 2013, Cell.
[10] Michael Z. Lin,et al. Autofluorescent proteins with excitation in the optical window for intravital imaging in mammals. , 2009, Chemistry & biology.
[11] M. Kennedy,et al. A light-triggered protein secretion system , 2013, The Journal of cell biology.
[12] T. Hunter,et al. The Protein Kinase Complement of the Human Genome , 2002, Science.
[13] B. Kuhlman,et al. A genetically-encoded photoactivatable Rac controls the motility of living cells , 2009, Nature.
[14] Ravi S Kane,et al. Optogenetic protein clustering and signaling activation in mammalian cells , 2013, Nature Methods.
[15] Michael Z. Lin,et al. Optical Control of Protein Activity by Fluorescent Protein Domains , 2012, Science.
[16] O. Carugo,et al. A Mek1–Mek2 heterodimer determines the strength and duration of the Erk signal , 2009, Nature Structural &Molecular Biology.
[17] Christopher A. Voigt,et al. Spatiotemporal Control of Cell Signalling Using A Light-Switchable Protein Interaction , 2009, Nature.
[18] J. McCubrey,et al. Signal transduction mediated by the Ras/Raf/MEK/ERK pathway from cytokine receptors to transcription factors: potential targeting for therapeutic intervention , 2003, Leukemia.
[19] Jacob J. Hughey,et al. High-Sensitivity Measurements of Multiple Kinase Activities in Live Single Cells , 2014, Cell.
[20] J. Hodgkin,et al. The ERK MAP Kinase Cascade Mediates Tail Swelling and a Protective Response to Rectal Infection in C. elegans , 2004, Current Biology.
[21] Randy J. Read,et al. Phaser crystallographic software , 2007, Journal of applied crystallography.
[22] Susan S. Taylor,et al. Allosteric Activation of Functionally Asymmetric RAF Kinase Dimers , 2013, Cell.
[23] Uri Alon,et al. Dynamics and variability of ERK2 response to EGF in individual living cells. , 2009, Molecular cell.
[24] R. Tsien,et al. A monomeric red fluorescent protein , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[25] W. Heo,et al. Spatiotemporal control of fibroblast growth factor receptor signals by blue light. , 2014, Chemistry & biology.
[26] Z. Otwinowski,et al. [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.
[27] K. Guan,et al. Cytoplasmic localization of the mitogen-activated protein kinase activator MEK. , 1994, The Journal of biological chemistry.
[28] Jens Timmer,et al. Multi-chromatic control of mammalian gene expression and signaling , 2013, Nucleic acids research.
[29] Moritoshi Sato,et al. Engineered pairs of distinct photoswitches for optogenetic control of cellular proteins , 2015, Nature Communications.
[30] Brian Kuhlman,et al. Designing photoswitchable peptides using the AsLOV2 domain. , 2012, Chemistry & biology.
[31] A. Sorkin,et al. Endocytosis of receptor tyrosine kinases. , 2013, Cold Spring Harbor perspectives in biology.
[32] K. Moffat,et al. Light-activated DNA binding in a designed allosteric protein , 2008, Proceedings of the National Academy of Sciences.
[33] Nils Blüthgen,et al. Strong negative feedback from Erk to Raf confers robustness to MAPK signalling , 2011, Molecular systems biology.
[34] Michael Z. Lin,et al. Improving FRET dynamic range with bright green and red fluorescent proteins , 2012, Nature Methods.
[35] S. Ceryak,et al. Raf-independent, PP2A-dependent MEK activation in response to ERK silencing. , 2009, Biochemical and biophysical research communications.
[36] B. Cui,et al. Light-Mediated Kinetic Control Reveals the Temporal Effect of the Raf/MEK/ERK Pathway in PC12 Cell Neurite Outgrowth , 2014, PloS one.
[37] Won Do Heo,et al. Reversible protein inactivation by optogenetic trapping in cells , 2014, Nature Methods.
[38] Yuta Nihongaki,et al. Photoactivatable CRISPR-Cas9 for optogenetic genome editing , 2015, Nature Biotechnology.
[39] G. Lahav,et al. Encoding and Decoding Cellular Information through Signaling Dynamics , 2013, Cell.
[40] J. Warmus,et al. Structures of human MAP kinase kinase 1 (MEK1) and MEK2 describe novel noncompetitive kinase inhibition , 2004, Nature Structural &Molecular Biology.
[41] Matias D Zurbriggen,et al. Optogenetic control of protein kinase activity in mammalian cells. , 2014, ACS synthetic biology.
[42] Michael Z. Lin,et al. Experimental systems for optogenetic control of protein activity with photodissociable fluorescent proteins , 2015, Photonics West - Biomedical Optics.
[43] G Ulrich Nienhaus,et al. Red fluorescent protein eqFP611 and its genetically engineered dimeric variants. , 2005, Journal of biomedical optics.
[44] Randy J. Read,et al. Acta Crystallographica Section D Biological , 2003 .
[45] J. Philo,et al. Sedimentation equilibrium analysis of mixed associations using numerical constraints to impose mass or signal conservation. , 2000, Methods in enzymology.
[46] R. Dolmetsch,et al. Induction of protein-protein interactions in live cells using light , 2009, Nature Biotechnology.
[47] Kevin W Eliceiri,et al. NIH Image to ImageJ: 25 years of image analysis , 2012, Nature Methods.
[48] Kevin Cowtan,et al. research papers Acta Crystallographica Section D Biological , 2005 .
[49] Sangkyun Lee,et al. Light-inducible receptor tyrosine kinases that regulate neurotrophin signalling , 2014, Nature Communications.
[50] L. Flatauer,et al. A Conserved Docking Site in MEKs Mediates High-affinity Binding to MAP Kinases and Cooperates with a Scaffold Protein to Enhance Signal Transmission* , 2001, The Journal of Biological Chemistry.
[51] Li-Huei Tsai,et al. A decade of CDK5 , 2001, Nature Reviews Molecular Cell Biology.
[52] M. Merkx,et al. Quantitative understanding of the energy transfer between fluorescent proteins connected via flexible peptide linkers. , 2006, Biochemistry.
[53] L. Johnson,et al. The structural basis for control of eukaryotic protein kinases. , 2012, Annual review of biochemistry.
[54] Nikolay V. Dokholyan,et al. Engineering extrinsic disorder to control protein activity in living cells , 2016, Science.
[55] Andreas Möglich,et al. Engineering of a red-light–activated human cAMP/cGMP-specific phosphodiesterase , 2014, Proceedings of the National Academy of Sciences.
[56] S. Grzesiek,et al. NMRPipe: A multidimensional spectral processing system based on UNIX pipes , 1995, Journal of biomolecular NMR.
[57] Harald Janovjak,et al. Spatio‐temporally precise activation of engineered receptor tyrosine kinases by light , 2014, The EMBO journal.
[58] P. Poulikakos,et al. Targeting RAS–ERK signalling in cancer: promises and challenges , 2014, Nature Reviews Drug Discovery.
[59] Kwang-Hyun Cho,et al. Positive- and negative-feedback regulations coordinate the dynamic behavior of the Ras-Raf-MEK-ERK signal transduction pathway , 2009, Journal of Cell Science.
[60] Sophie Dahan,et al. Spatial and Temporal Regulation of Receptor Tyrosine Kinase Activation and Intracellular Signal Transduction. , 2016, Annual review of biochemistry.
[61] John G. Albeck,et al. Frequency-modulated pulses of ERK activity transmit quantitative proliferation signals. , 2013, Molecular cell.
[62] M. Ehlers,et al. Rapid blue light induction of protein interactions in living cells , 2010, Nature Methods.
[63] T. Halazonetis,et al. Ultraviolet-B-mediated induction of protein–protein interactions in mammalian cells , 2013, Nature Communications.