Draft Genome Sequence of a Fermenting Bacterium, Soehngenia sp. Strain 1933P, Isolated from a Petroleum Reservoir in Azerbaijan

The draft genome sequence of a mesophilic fermenting bacterium, Soehngenia sp. strain 1933P, isolated from production water of the Binagady petroleum reservoir (Republic of Azerbaijan), is presented. The genome is annotated for elucidation of the metabolic potential and taxonomic position of strain 1933P. ABSTRACT The draft genome sequence of a mesophilic fermenting bacterium, Soehngenia sp. strain 1933P, isolated from production water of the Binagady petroleum reservoir (Republic of Azerbaijan), is presented. The genome is annotated for elucidation of the metabolic potential and taxonomic position of strain 1933P.

[1]  K. Konstantinidis,et al.  The enveomics collection: a toolbox for specialized analyses of microbial genomes and metagenomes , 2016 .

[2]  Fangfang Xia,et al.  RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes , 2015, Scientific Reports.

[3]  Björn Usadel,et al.  Trimmomatic: a flexible trimmer for Illumina sequence data , 2014, Bioinform..

[4]  Fangfang Xia,et al.  The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST) , 2013, Nucleic Acids Res..

[5]  Sergey I. Nikolenko,et al.  SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing , 2012, J. Comput. Biol..

[6]  Hans-Peter Klenk,et al.  Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison , 2010, Standards in genomic sciences.

[7]  Rick L. Stevens,et al.  The RAST Server: Rapid Annotations using Subsystems Technology , 2008, BMC Genomics.

[8]  A. Stams,et al.  Soehngenia saccharolytica gen. nov., sp. nov. and Clostridium amygdalinum sp. nov., two novel anaerobic, benzaldehyde-converting bacteria. , 2003, International journal of systematic and evolutionary microbiology.

[9]  K. Wilson Preparation of Genomic DNA from Bacteria , 2001, Current protocols in molecular biology.

[10]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[11]  N. Pace,et al.  Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[12]  Henrik Christensen,et al.  Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes. , 2018, International journal of systematic and evolutionary microbiology.

[13]  K. Pepin Prokaryotic Genome Annotation Pipeline , 2009 .

[14]  L. Daniels,et al.  Bacterial methanogenesis: Acetate as a methane precursor in pure culture , 2004, Archives of Microbiology.

[15]  T. Nazina,et al.  Microbial oil transformation processes accompanied by methane and hydrogen‐sulfide formation , 1985 .