Distribution Patterns of Microbial Community Structure Along a 7000-Mile Latitudinal Transect from the Mediterranean Sea Across the Atlantic Ocean to the Brazilian Coastal Sea
暂无分享,去创建一个
Guofu Chen | Chunyun Zhang | Jin Zhou | Hui Jin | Y. Lao | Xiao Song | Zhonghua Cai
[1] A. Perfumo,et al. Hydrocarbon degraders establish at the costs of microbial richness, abundance and keystone taxa after crude oil contamination in permafrost environments , 2016, Scientific Reports.
[2] I. Hewson,et al. Abundance of Two Pelagibacter ubique Bacteriophage Genotypes along a Latitudinal Transect in the North and South Atlantic Oceans , 2016, Front. Microbiol..
[3] M. Doebeli,et al. Decoupling function and taxonomy in the global ocean microbiome , 2016, Science.
[4] Jizhong Zhou,et al. The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages. , 2016, Ecology letters.
[5] J. McManus,et al. North Atlantic ocean circulation and abrupt climate change during the last glaciation , 2016, Science.
[6] Stefan Schouten,et al. Hydrogen peroxide detoxification is a key mechanism for growth of ammonia-oxidizing archaea , 2016, Proceedings of the National Academy of Sciences.
[7] J. Kengwoung-Keumo. Competition between a nonallelopathic phytoplankton and an allelopathic phytoplankton species under predation. , 2016, Mathematical biosciences and engineering : MBE.
[8] Zhi-Luo Deng,et al. Bacterioplankton Biogeography of the Atlantic Ocean: A Case Study of the Distance-Decay Relationship , 2016, Front. Microbiol..
[9] Li Huang,et al. Spatial Variations of Prokaryotic Communities in Surface Water from India Ocean to Chinese Marginal Seas and their Underlining Environmental Determinants , 2016, Front. Mar. Sci..
[10] Bin Zhao,et al. Diversity, Abundance, and Niche Differentiation of Ammonia-Oxidizing Prokaryotes in Mud Deposits of the Eastern China Marginal Seas , 2016, Front. Microbiol..
[11] B. Eyre,et al. Bacterioplankton Dynamics within a Large Anthropogenically Impacted Urban Estuary , 2016, Front. Microbiol..
[12] G. Zhu,et al. Species, Abundance and Function of Ammonia-oxidizing Archaea in Inland Waters across China , 2015, Scientific Reports.
[13] V. Turk,et al. Bacterial community shift is induced by dynamic environmental parameters in a changing coastal ecosystem (northern Adriatic, northeastern Mediterranean Sea)--a 2-year time-series study. , 2015, Environmental microbiology.
[14] B. Herut,et al. Distribution patterns of bacterioplankton in the oligotrophic south-eastern Mediterranean Sea. , 2015, FEMS microbiology ecology.
[15] F. Thompson,et al. Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review , 2015, PeerJ.
[16] B. Jørgensen,et al. Methanogenic archaea and sulfate reducing bacteria co-cultured on acetate: teamwork or coexistence? , 2015, Front. Microbiol..
[17] S. Palumbi,et al. Uncovering hidden worlds of ocean biodiversity , 2015, Science.
[18] Luis Pedro Coelho,et al. Structure and function of the global ocean microbiome , 2015, Science.
[19] Peer Bork,et al. Determinants of community structure in the global plankton interactome , 2015, Science.
[20] Peer Bork,et al. Open science resources for the discovery and analysis of Tara Oceans data , 2015, Scientific Data.
[21] David C. Smith,et al. Bacterial and archaeal biogeography of the deep chlorophyll maximum in the South Pacific Gyre , 2015 .
[22] Joshua Livermore,et al. Local–global overlap in diversity informs mechanisms of bacterial biogeography , 2015, The ISME Journal.
[23] T. Hazen,et al. The Unique Chemistry of Eastern Mediterranean Water Masses Selects for Distinct Microbial Communities by Depth , 2015, PloS one.
[24] G. Luther,et al. Microbial Iron Mats at the Mid-Atlantic Ridge and Evidence that Zetaproteobacteria May Be Restricted to Iron-Oxidizing Marine Systems , 2015, PloS one.
[25] Francisco P Chavez,et al. Microbial community transcriptional networks are conserved in three domains at ocean basin scales , 2015, Proceedings of the National Academy of Sciences.
[26] S. Giovannoni,et al. Rethinking the marine carbon cycle: Factoring in the multifarious lifestyles of microbes , 2015, Science.
[27] Xiaohua Zhang,et al. Phylogenetic shifts of bacterioplankton community composition along the Pearl Estuary: the potential impact of hypoxia and nutrients , 2015, Front. Microbiol..
[28] Jed A. Fuhrman,et al. Marine microbial community dynamics and their ecological interpretation , 2015, Nature Reviews Microbiology.
[29] Kazuo Yamamoto,et al. Seawater-driven forward osmosis for enriching nitrogen and phosphorous in treated municipal wastewater: effect of membrane properties and feed solution chemistry. , 2015, Water research.
[30] M. Oliver,et al. Seasonal dynamics of active SAR11 ecotypes in the oligotrophic Northwest Mediterranean Sea , 2014, The ISME Journal.
[31] A. Enrich-Prast,et al. Microbial diversity and community structure across environmental gradients in Bransfield Strait, Western Antarctic Peninsula , 2014, Front. Microbiol..
[32] Robert G. Beiko,et al. STAMP: statistical analysis of taxonomic and functional profiles , 2014, Bioinform..
[33] S. Suh,et al. Distinct patterns of marine bacterial communities in the South and North Pacific Oceans , 2014, Journal of Microbiology.
[34] C. Winter,et al. Fracture zones in the Mid Atlantic Ridge lead to alterations in prokaryotic and viral parameters in deep-water masses , 2014, Front. Microbiol..
[35] A. Spormann,et al. Hydrogenase-independent uptake and metabolism of electrons by the archaeon Methanococcus maripaludis , 2014, The ISME Journal.
[36] L. Roesch,et al. Network topology reveals high connectance levels and few key microbial genera within soils , 2014, Front. Environ. Sci..
[37] S. Giovannoni,et al. Implications of streamlining theory for microbial ecology , 2014, The ISME Journal.
[38] Sarah R. Smith,et al. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing , 2014, PLoS biology.
[39] Z. Ma,et al. Spatial heterogeneity and co-occurrence patterns of human mucosal-associated intestinal microbiota , 2013, The ISME Journal.
[40] B. Fuchs,et al. Variations in pelagic bacterial communities in the North Atlantic Ocean coincide with water bodies , 2013 .
[41] Anne-Flore Deton-Cabanillas,et al. Complex patterns in phytoplankton and microeukaryote diversity along the estuarine continuum , 2013, Hydrobiologia.
[42] Karina L. Mine,et al. Unexpected links reflect the noise in networks , 2013, Biology Direct.
[43] F. Rodríguez-Valera,et al. Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria , 2013, Scientific Reports.
[44] Robert C. Edgar,et al. UPARSE: highly accurate OTU sequences from microbial amplicon reads , 2013, Nature Methods.
[45] D. Daffonchio,et al. Biogeography of planktonic bacterial communities across the whole Mediterranean Sea , 2013 .
[46] Niels W. Hanson,et al. Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean , 2013, Proceedings of the National Academy of Sciences.
[47] Svein Valla,et al. Metagenomics of microbial life in extreme temperature environments. , 2013, Current opinion in biotechnology.
[48] B. Fu,et al. Ecological Drivers of Biogeographic Patterns of Soil Archaeal Community , 2013, PloS one.
[49] E. Delong,et al. Pattern and synchrony of gene expression among sympatric marine microbial populations , 2013, Proceedings of the National Academy of Sciences.
[50] J. Soussana,et al. Habitat filtering and niche differentiation jointly explain species relative abundance within grassland communities along fertility and disturbance gradients. , 2012, The New phytologist.
[51] Matthew Z. DeMaere,et al. Global biogeography of SAR11 marine bacteria , 2012, Molecular systems biology.
[52] J. Raes,et al. Microbial interactions: from networks to models , 2012, Nature Reviews Microbiology.
[53] Curtis Huttenhower,et al. Microbial Co-occurrence Relationships in the Human Microbiome , 2012, PLoS Comput. Biol..
[54] A. Rogers,et al. Patterns of marine bacterioplankton biodiversity in the surface waters of the Scotia Arc, Southern Ocean. , 2012, FEMS microbiology ecology.
[55] S. Giovannoni,et al. Seasonality in Ocean Microbial Communities , 2012, Science.
[56] P. Lundberg,et al. Phylogenetic Analysis Suggests That Habitat Filtering Is Structuring Marine Bacterial Communities Across the Globe , 2012, Microbial Ecology.
[57] M. Montero,et al. Is There a Seamount Effect on Microbial Community Structure and Biomass? The Case Study of Seine and Sedlo Seamounts (Northeast Atlantic) , 2012, PloS one.
[58] Jianjun Wang,et al. Do Patterns of Bacterial Diversity along Salinity Gradients Differ from Those Observed for Macroorganisms? , 2011, PloS one.
[59] F. J. Luque,et al. Ligand migration in Methanosarcina acetivorans protoglobin: effects of ligand binding and dimeric assembly. , 2011, The journal of physical chemistry. B.
[60] Susan M. Huse,et al. Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems , 2011, PloS one.
[61] D. Caron,et al. Marine bacterial, archaeal and protistan association networks reveal ecological linkages , 2011, The ISME Journal.
[62] Rob Knight,et al. UCHIME improves sensitivity and speed of chimera detection , 2011, Bioinform..
[63] Rob Knight,et al. Examining the global distribution of dominant archaeal populations in soil , 2011, The ISME Journal.
[64] B. Quéguiner,et al. How far details are important in ecosystem modelling: the case of multi-limiting nutrients in phytoplankton–zooplankton interactions , 2010, Philosophical Transactions of the Royal Society B: Biological Sciences.
[65] Ye Deng,et al. Functional Molecular Ecological Networks , 2010, mBio.
[66] J. Ferry,et al. How to make a living by exhaling methane. , 2010, Annual review of microbiology.
[67] A. Santoro,et al. Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current. , 2010, Environmental microbiology.
[68] Hubert Rehrauer,et al. A global network of coexisting microbes from environmental and whole-genome sequence data. , 2010, Genome research.
[69] Susan M. Huse,et al. Ironing out the wrinkles in the rare biosphere through improved OTU clustering , 2010, Environmental microbiology.
[70] William A. Walters,et al. QIIME allows analysis of high-throughput community sequencing data , 2010, Nature Methods.
[71] E. Casamayor,et al. Global ecological patterns in uncultured Archaea , 2010, The ISME Journal.
[72] C. Dytham,et al. Relative roles of niche and neutral processes in structuring a soil microbial community , 2010, The ISME Journal.
[73] W. Ulrich,et al. Species assortment or habitat filtering: a case study of spider communities on lake islands , 2010, Ecological Research.
[74] Dawn Field,et al. The seasonal structure of microbial communities in the Western English Channel. , 2009, Environmental microbiology.
[75] Martin Hartmann,et al. Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities , 2009, Applied and Environmental Microbiology.
[76] C. Quince,et al. Accurate determination of microbial diversity from 454 pyrosequencing data , 2009, Nature Methods.
[77] F. Rohwer,et al. Viruses manipulate the marine environment , 2009, Nature.
[78] J. Fuhrman. General Distributions and the 'rare Biosphere' Microbial Community Structure and Its Functional Implications Review Insight , 2022 .
[79] R. Knight,et al. The influence of sex, handedness, and washing on the diversity of hand surface bacteria , 2008, Proceedings of the National Academy of Sciences.
[80] C. McClain,et al. Environmental factors controlling the phytoplankton blooms at the Patagonia shelf-break in spring , 2008 .
[81] Maureen A. O’Malley. 'Everything is everywhere: but the environment selects': ubiquitous distribution and ecological determinism in microbial biogeography. , 2008, Studies in history and philosophy of biological and biomedical sciences.
[82] Daniel S. Jones,et al. Niche differentiation among sulfur-oxidizing bacterial populations in cave waters , 2008, The ISME Journal.
[83] Andreas Richter,et al. Nitrification in terrestrial hot springs of Iceland and Kamchatka. , 2008, FEMS microbiology ecology.
[84] W. Whitman,et al. Metabolic, Phylogenetic, and Ecological Diversity of the Methanogenic Archaea , 2008, Annals of the New York Academy of Sciences.
[85] T. McMahon,et al. Updated world map of the Köppen-Geiger climate classification , 2007 .
[86] F. Bushman,et al. Short pyrosequencing reads suffice for accurate microbial community analysis , 2007, Nucleic acids research.
[87] Susan M. Huse,et al. Accuracy and quality of massively parallel DNA pyrosequencing , 2007, Genome Biology.
[88] A. Halpern,et al. The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific , 2007, PLoS biology.
[89] Francesca Malfatti,et al. Microbial structuring of marine ecosystems , 2007, Nature Reviews Microbiology.
[90] A. Konopka,et al. Effect of Nutrient Periodicity on Microbial Community Dynamics , 2006, Applied and Environmental Microbiology.
[91] S Psarra,et al. Nature of Phosphorus Limitation in the Ultraoligotrophic Eastern Mediterranean , 2005, Science.
[92] J. Fuhrman,et al. Rapid Detection of Enteroviruses in Small Volumes of Natural Waters by Real-Time Quantitative Reverse Transcriptase PCR , 2005, Applied and Environmental Microbiology.
[93] D. Vaulot,et al. Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene. , 2005, FEMS microbiology ecology.
[94] D. Oesterhelt,et al. A two-alpha-helix extra domain mediates the halophilic character of a plant-type ferredoxin from halophilic archaea. , 2005, Biochemistry.
[95] Jef Huisman,et al. Global biodiversity patterns of marine phytoplankton and zooplankton , 2004, Nature.
[96] K. Timmis,et al. Isolation of haloarchaea that grow at low salinities. , 2004, Environmental microbiology.
[97] Nora G. Montoya,et al. Characterization of spring phytoplankton communities in the Río de La Plata maritime front using pigment signatures and cell microscopy , 2003 .
[98] Victor Smetacek,et al. Architecture and material properties of diatom shells provide effective mechanical protection , 2003, Nature.
[99] B. Finlay. Global Dispersal of Free-Living Microbial Eukaryote Species , 2002, Science.
[100] A. A. Ross,et al. A Suggested Protocol for Continuous Flow Automated Analysis of Seawater Nutrients Using the Alpkem Flow Solution IV System (Phosphate, Nitrate, Nitrite, Silicic Acid and Ammonia) chemical protocols used in the WOCE Hydrographic Program and the Joint Global Ocean Fluxes Study , 2001 .
[101] F. Chapin,et al. Consequences of changing biodiversity , 2000, Nature.
[102] Frédéric Médail,et al. Hot-Spots Analysis for Conservation of Plant Biodiversity in the Mediterranean Basin , 1997 .
[103] K. Porter,et al. The use of DAPI for identifying and counting aquatic microflora1 , 1980 .
[104] J. P. Riley,et al. A modified single solution method for the determination of phosphate in natural waters , 1962 .
[105] Y. Shinmei,et al. Macroecological patterns of phytoplankton in the northwestern North Atlantic Ocean , 2022 .