Occurrence and Carbon Metabolism of Green Nonsulfur-like Bacteria in Californian and Nevada Hot Spring Microbial mats as Revealed by Wax Ester Lipid Analysis

Green nonsulfur-like bacteria (GNSLB) in Yellowstone hot spring microbial mats have been extensively studied and are thought to operate both as photoheterotrophs and photoautotrophs. Here we studied the occurrence and carbon metabolisms of GNSLB by analyzing the distribution and isotopic composition of their characteristic wax ester lipids in four Californian and Nevada hot spring microbial mats at a range of temperatures (37–96°C). The distribution of wax esters varied strongly with temperature. At temperatures between 50–60°C the wax ester composition in each of the four hot spring microbial mats was dominated by C30 to C36 wax esters, consisting of mixtures of C15-C18 n-alkyl and branched fatty acids and alcohols, typical for GNSLB. Stable carbon isotopic analysis showed that these wax esters were only depleted by 5 to 10‰ compared to dissolved inorganic carbon in the overlying water, suggesting that these GNSLB were mainly autotrophic. However, analysis of different depth layers of one microbial mat showed that these GNSLB wax esters were increasingly depleted in 13C with depth, suggesting that photoautotrophy mainly occurred in the top layer of the mat. 13C-depleted C36-C44 wax esters were found in one hot spring at high temperatures (77–96°C) and are likely derived from allochtonous plant waxes. At several lower temperature sites (35–40°C) the wax esters were predominantly composed of C28, C30 and C32 wax esters consisting of mixtures of C14-C16 fatty acids and n-alkanols and were depleted in 13C by 15–20‰ relative to dissolved inorganic carbon, suggesting they may be derived from heterotrophic organisms. Our results indicate that autotrophic GNSLB occur widely in hot springs and that diverse groups of organisms contribute to the pool of wax ester lipids in hot spring environments.

[1]  Stefan Schouten,et al.  Distribution and isotopic composition of bacterial lipid biomarkers in microbial mats from a sulfidic Icelandic hot spring , 2008 .

[2]  J. Wiegel,et al.  Lipid Biomarkers, Carbon Isotopes, and Phylogenetic Characterization of Bacteria in California and Nevada Hot Springs , 2007 .

[3]  A. Çelekli,et al.  On the relationship between ecology and phytoplankton composition in a karstic spring (Çepni, Bolu) , 2007 .

[4]  D. M. Ward,et al.  Impact of carbon metabolism on 13C signatures of cyanobacteria and green non-sulfur-like bacteria inhabiting a microbial mat from an alkaline siliceous hot spring in Yellowstone National Park (USA). , 2007, Environmental microbiology.

[5]  Andrea Wieland,et al.  Diel Variations in Carbon Metabolism by Green Nonsulfur-Like Bacteria in Alkaline Siliceous Hot Spring Microbial Mats from Yellowstone National Park , 2005, Applied and Environmental Microbiology.

[6]  H. Naraoka,et al.  Hydrogen and carbon isotopic fractionations of lipid biosynthesis among terrestrial (C3, C4 and CAM) and aquatic plants. , 2004, Phytochemistry.

[7]  J. Farmer,et al.  Lipid biomarker and carbon isotopic signatures for stromatolite‐forming, microbial mat communities and Phormidium cultures from Yellowstone National Park , 2004 .

[8]  D. M. Ward,et al.  Compound-Specific Isotopic Fractionation Patterns Suggest Different Carbon Metabolisms among Chloroflexus-Like Bacteria in Hot-Spring Microbial Mats , 2003, Applied and Environmental Microbiology.

[9]  Y. Sakai,et al.  Wax ester production by bacteria. , 2003, Current opinion in microbiology.

[10]  J. Weckesser,et al.  Characterization of a photosynthetic Euglena strain isolated from an acidic hot mud pool of a volcanic area of Costa Rica. , 2002, FEMS microbiology ecology.

[11]  D. M. Ward,et al.  Microscopic Examination of Distribution and Phenotypic Properties of Phylogenetically Diverse Chloroflexaceae-Related Bacteria in Hot Spring Microbial Mats , 2002, Applied and Environmental Microbiology.

[12]  D. M. Ward,et al.  Alkane-1,2-diol-based glycosides and fatty glycosides and wax esters in Roseiflexus castenholzii and hot spring microbial mats , 2002, Archives of Microbiology.

[13]  D. M. Ward,et al.  Biosynthetic Controls on the 13C Contents of Organic Components in the Photoautotrophic Bacterium Chloroflexus aurantiacus * , 2001, The Journal of Biological Chemistry.

[14]  D. M. Ward,et al.  Autotrophy of green non-sulphur bacteria in hot spring microbial mats: biological explanations for isotopically heavy organic carbon in the geological record. , 2000, Environmental microbiology.

[15]  D. M. Ward,et al.  All-cis hentriaconta-9,15,22-triene in microbial mats formed by the phototrophic prokaryote Chloroflexus. , 1999, Organic geochemistry.

[16]  R. Triemer,et al.  A Molecular Study of Euglenoid Phylogeny using Small Subunit rDNA , 1999, The Journal of eukaryotic microbiology.

[17]  David M. Ward,et al.  A Natural View of Microbial Biodiversity within Hot Spring Cyanobacterial Mat Communities , 1998, Microbiology and Molecular Biology Reviews.

[18]  C. Vivar,et al.  Heterotrophic bacterial populations in the mineral waters of thermal springs in Spain. , 1994, The Journal of applied bacteriology.

[19]  Brian Fry,et al.  Compound-specific δ 13C analyses of leaf lipids from plants with differing carbon dioxide metabolisms , 1994 .

[20]  G. Fuchs,et al.  Enzymes of a novel autotrophic CO2 fixation pathway in the phototrophic bacterium Chloroflexus aurantiacus, the 3-hydroxypropionate cycle. , 1993, European journal of biochemistry.

[21]  David M. Ward,et al.  Photoexcretion and Fate of Glycolate in a Hot Spring Cyanobacterial Mat , 1988, Applied and environmental microbiology.

[22]  D. M. Ward,et al.  Biogeochemistry of hot spring environments: Extractable lipids of a cyanobacterial mat , 1988 .

[23]  D. M. Ward,et al.  Obligately phototrophic Chloroflexus: primary production in anaerobic hot spring microbial mats , 1987, Archives of Microbiology.

[24]  C. Woese,et al.  The green non-sulfur bacteria: a deep branching in the eubacterial line of descent. , 1987, Systematic and applied microbiology.

[25]  H. Holo,et al.  Autotrophic growth and CO2 fixation of Chloroflexus aurantiacus , 1986, Archives of Microbiology.

[26]  R. Sirevåg,et al.  Quantitative and structural characteristics of lipids in Chlorobium and Chloroflexus , 1982, Archives of Microbiology.

[27]  P. Walne,et al.  Aliphatic Chains of Esterified Lipids in Isolated Eyespots of Euglena gracilis var. bacillaris. , 1976, Plant physiology.

[28]  M. Madigan,et al.  Photosynthetic sulfide oxidation by Chloroflexus aurantiacus, a filamentous, photosynthetic, gliding bacterium , 1975, Journal of bacteriology.

[29]  M. Madigan,et al.  Nutritional studies on Chloroflexus, a filamentous photosynthetic, gliding bacterium , 1974, Archives of Microbiology.

[30]  D. Seigler,et al.  Wax esters from Larrea divaricata , 1974 .

[31]  W. G. Mook,et al.  CARBON ISOTOPE FRACTIONATION BETWEEN DISSOLVED BICARBONATE AND GASEOUS CARBON-DIOXIDE , 1974 .

[32]  T. D. Brock,et al.  Ecological studies of Chloroflexis, a gliding photosynthetic bacterium , 1973, Archiv für Mikrobiologie.

[33]  R. Castenholz THE POSSIBLE PHOTOSYNTHETIC USE OF SULFIDE BY THE FILAMENTOUS PHOTOTROPHIC BACTERIA OF HOT SPRINGS1 , 1973 .

[34]  R. Pancost,et al.  Lipid biomolecules in silica sinters: indicators of microbial biodiversity. , 2005, Environmental microbiology.

[35]  R. Castenholz,et al.  A phototrophic gliding filamentous bacterium of hot springs, Chloroflexus aurantiacus, gen. and sp. nov. , 2004, Archives of Microbiology.

[36]  M. Madigan Anoxygenic phototrophic bacteria from extreme environments , 2004, Photosynthesis Research.

[37]  S. Takaichi,et al.  Roseiflexus castenholzii gen. nov., sp. nov., a thermophilic, filamentous, photosynthetic bacterium that lacks chlorosomes. , 2002, International journal of systematic and evolutionary microbiology.

[38]  D. M. Ward,et al.  Biosynthetic controls on the 13C contents of organic components in the photoautotrophic bacterium Chloroflexus aurantiacus. , 2001, The Journal of biological chemistry.

[39]  B. Simoneit,et al.  Lipid biomarkers for bacterial ecosystems: studies of cultured organisms, hydrothermal environments and ancient sediments. , 1996, Ciba Foundation symposium.

[40]  R. Castenholz,et al.  The Family Chloroflexaceae , 1992 .

[41]  D. M. Ward,et al.  Comparative analysis of extractable lipids in hot spring microbial mats and their component photosynthetic bacteria , 1991 .

[42]  S. Koritala Microbiological synthesis of wax esters by euglena gracilis , 1989 .

[43]  P. Kolattukudy Cutin, suberin, and waxes , 1980 .

[44]  G. A. Thompson,et al.  COMPLEX LIPIDS. , 1963, Annual review of biochemistry.