Structure-Aware Noise Reduction Generative Adversarial Network for Optical Coherence Tomography Image

Optical coherence tomography (OCT) is a common imaging examination in ophthalmology, which can visualize cross-sectional retinal structures for diagnosis. However, image quality still suffers from speckle noise and other motion artifacts. An effective OCT denoising method is needed to ensure the image is interpreted correctly. However, lack of paired clean image restricts its development. Here, we propose an end-to-end structure-aware noise reduction generative adversarial network (SNR-GAN), trained with un-paired OCT images. The network is designed to translate images between noisy domain and clean domain. Besides adversarial and cycle consistence loss, structure-aware loss based on structural similarity index (SSIM) is added to the objective function, so as to achieve more structural constraints during image denoising. We evaluated our method on normal and pathological OCT datasets. Compared to the traditional methods, our proposed method achieved the best denoising performance and subtle structural preservation.

[1]  Joachim Hornegger,et al.  Wavelet denoising of multiframe optical coherence tomography data , 2012, Biomedical optics express.

[2]  Xiaofei Wang,et al.  A Deep Learning Approach to Denoise Optical Coherence Tomography Images of the Optic Nerve Head , 2018, Scientific Reports.

[3]  Bo Chong,et al.  Speckle reduction in optical coherence tomography images of human finger skin by wavelet modified BM3D filter , 2013 .

[4]  Alexei A. Efros,et al.  Unpaired Image-to-Image Translation Using Cycle-Consistent Adversarial Networks , 2017, 2017 IEEE International Conference on Computer Vision (ICCV).

[5]  Eero P. Simoncelli,et al.  Image quality assessment: from error visibility to structural similarity , 2004, IEEE Transactions on Image Processing.

[6]  Alexei A. Efros,et al.  Image-to-Image Translation with Conditional Adversarial Networks , 2016, 2017 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[7]  Ivan W. Selesnick,et al.  Three Dimensional Data-Driven Multi Scale Atomic Representation of Optical Coherence Tomography , 2015, IEEE Transactions on Medical Imaging.

[8]  Wolfgang Heidrich,et al.  Statistical model for OCT image denoising. , 2017, Biomedical optics express.

[9]  Jichai Jeong,et al.  Effective speckle noise suppression in optical coherence tomography images using nonlocal means denoising filter with double Gaussian anisotropic kernels , 2015 .

[10]  Xinjian Chen,et al.  Speckle noise reduction in optical coherence tomography images based on edge-sensitive cGAN. , 2018, Biomedical optics express.

[11]  J. Duker,et al.  Optical coherence tomography – current and future applications , 2013, Current Opinion in Ophthalmology.

[12]  H. M. Salinas,et al.  Comparison of PDE-Based Nonlinear Diffusion Approaches for Image Enhancement and Denoising in Optical Coherence Tomography , 2007, IEEE Transactions on Medical Imaging.