Development of a Genosensor for Sickle Cell Anemia Trait Determination

Sickle cell anemia (SCA) is a common recessive genetic condition in which patients produce an abnormal form of hemoglobin. The disease is common mainly among African individuals and in parts of the continent up to 40 % of the population presents its genetic trait. Currently, disease diagnosis and trait determination are performed using polymerase chain reaction, liquid chromatography and electrophoresis. Although these methods present high sensitivity and are well established, they are costly and require specialized equipment to be performed. We developed an electrochemical genosensor for simple and low cost SCA trait determination. The device was based on the immobilization of single DNA strands containing the disease related mutation on gold platforms using the self-assembled monolayers technique. The determination of SCA trait was then performed using electrochemical impedance spectroscopy. The genosensor displayed a wide linear range (0.01 to 7.5 μmol L−1, R2=0.979), with a detection limit of 7.0 nmol L−1. Furthermore, the device was able to distinguish between DNA sequences containing or not the mutation (target and non-target sequences) with precision and great reproducibility (10.4 %, n=3). It is expected that such sensor increases the number of SCA trait determination, promoting early diagnosis and genetically counseling.

[1]  N. Ono,et al.  Microfluidic analysis of pressure drop and flow behavior in hypertensive micro vessels , 2015, Biomedical microdevices.

[2]  Valtencir Zucolotto,et al.  A nanostructured genosensor for the early diagnosis of systemic arterial hypertension , 2015, Biomedical microdevices.

[3]  J. Gonzalez,et al.  Prevalence of the sickle cell trait in Gabon: a nationwide study. , 2014, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

[4]  Rubiyah Yusof,et al.  Development of carbon nanotube based biosensors model for detection of single-nucleotide polymorphism , 2014 .

[5]  Scott T. Miller,et al.  Hydroxycarbamide in very young children with sickle-cell anaemia: a multicentre, randomised, controlled trial (BABY HUG) , 2011, The Lancet.

[6]  Anand P. Patil,et al.  Global distribution of the sickle cell gene and geographical confirmation of the malaria hypothesis , 2010, Nature communications.

[7]  F. Gao,et al.  Engineering hybrid nanotube wires for high-power biofuel cells. , 2010, Nature communications.

[8]  Juewen Liu,et al.  Functional nucleic acid sensors. , 2009, Chemical reviews.

[9]  X. Mao,et al.  A nanoparticle amplification based quartz crystal microbalance DNA sensor for detection of Escherichia coli O157:H7. , 2006, Biosensors & bioelectronics.

[10]  Despina P Kalogianni,et al.  Nanoparticle-based DNA biosensor for visual detection of genetically modified organisms. , 2006, Biosensors & bioelectronics.

[11]  Mehmet Ozsoz,et al.  Label-free electrochemical hybridization genosensor for the detection of hepatitis B virus genotype on the development of Lamivudine resistance. , 2005, Analytical chemistry.

[12]  Yi Xiao,et al.  Aptamer-functionalized Au nanoparticles for the amplified optical detection of thrombin. , 2004, Journal of the American Chemical Society.

[13]  Kang Xu,et al.  Electrochemical impedance study on the low temperature of Li-ion batteries , 2004 .

[14]  I. Willner,et al.  Probing Biomolecular Interactions at Conductive and Semiconductive Surfaces by Impedance Spectroscopy: Routes to Impedimetric Immunosensors, DNA‐Sensors, and Enzyme Biosensors , 2003 .

[15]  I-Ming Hsing,et al.  Microfabricated PCR-electrochemical device for simultaneous DNA amplification and detection. , 2003, Lab on a chip.

[16]  Dapa Diallo,et al.  Sickle cell disease in Africa , 2002, Current opinion in hematology.

[17]  A. Syvänen Accessing genetic variation: genotyping single nucleotide polymorphisms , 2001, Nature Reviews Genetics.

[18]  R. B. D. P. E. Silva,et al.  Riscos e benefícios da triagem genética: o traço falciforme como modelo de estudo em uma população brasileira , 1997 .

[19]  M. Heller,et al.  Rapid determination of single base mismatch mutations in DNA hybrids by direct electric field control. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[20]  G. Lawson Defining limit of detection and limit of quantitation as applied to drug of abuse testing: striving for a consensus. , 1994, Clinical chemistry.

[21]  D A Armbruster,et al.  Limit of detection (LQD)/limit of quantitation (LOQ): comparison of the empirical and the statistical methods exemplified with GC-MS assays of abused drugs. , 1994, Clinical chemistry.

[22]  L. Pauling,et al.  Sickle cell anemia a molecular disease. , 1949, Science.

[23]  J. Neel The Inheritance of Sickle Cell Anemia. , 1949, Science.

[24]  A. Dalal,et al.  Sickle Cell Anemia—Molecular Diagnosis and Prenatal Counseling: SGPGI Experience , 2011, The Indian Journal of Pediatrics.

[25]  L. Blum,et al.  DNA biosensors and microarrays. , 2008, Chemical reviews.

[26]  R S Foote,et al.  Microchip device for cell lysis, multiplex PCR amplification, and electrophoretic sizing. , 1998, Analytical chemistry.