Stochastic Channel Switching of Frequency-Encoded Signals in Molecular Communication Networks

This letter investigates the impact of noise on the functionality of channel switches in molecular communication networks. The channel switches considered in this letter are designed based on a set of biological cells that propagate frequency-encoded Ca2+ signals through gap junction channels. First, we develop a stochastic and generalized model of Ca2+ signaling considering three types of noise, such as internal noise, external noise, and gating noise of gap junction channels. Second, we develop a method based on spectral analysis to determine whether cells extract information from frequency-encoded Ca2+ signals. Third, we examine numerically whether channel switches propagate Ca2+ signals to selected cells in the presence of noise, and show how noise degrades the performance of channel switches.

[1]  Xudong Cao,et al.  Patterning multiple cell types in co-cultures: A review , 2009 .

[2]  Luc Leybaert,et al.  Connexin mimetic peptides inhibit Cx43 hemichannel opening triggered by voltage and intracellular Ca2+ elevation , 2012, Basic Research in Cardiology.

[3]  Ya Jia,et al.  A constructive role of internal noise on coherence resonance induced by external noise in a calcium oscillation system , 2009 .

[4]  Matthew D. Higgins,et al.  Performance of SW-ARQ in bacterial quorum communications , 2015, Nano Commun. Networks.

[5]  Camillo Peracchia,et al.  Gap junctions : molecular basis of cell communication in health and disease , 2000 .

[6]  Andrew W. Eckford,et al.  A Comprehensive Survey of Recent Advancements in Molecular Communication , 2014, IEEE Communications Surveys & Tutorials.

[7]  Michael G. Roper,et al.  Microfluidic chip for continuous monitoring of hormone secretion from live cells using an electrophoresis-based immunoassay. , 2003, Analytical chemistry.

[8]  A Goldbeter,et al.  Minimal model for signal-induced Ca2+ oscillations and for their frequency encoding through protein phosphorylation. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[9]  Qiang Liu,et al.  Channel Switching in Molecular Communication Networks through Calcium Signaling , 2017, 2017 IEEE Wireless Communications and Networking Conference (WCNC).

[10]  A. Vasilakos,et al.  Molecular Communication Among Biological Nanomachines: A Layered Architecture and Research Issues , 2014, IEEE Transactions on NanoBioscience.

[11]  N. Gilula,et al.  Functional assembly of gap junction conductance in lipid bilayers: Demonstration that the major 27 kd protein forms the junctional channel , 1987, Cell.

[12]  Mauro Femminella,et al.  Congestion Control in Molecular Cyber-Physical Systems , 2017, IEEE Access.