A Stk4-Foxp3–NF-κB p65 transcriptional complex promotes Treg cell activation and homeostasis

The molecular programs involved in regulatory T (Treg) cell activation and homeostasis remain incompletely understood. Here, we show that T cell receptor (TCR) signaling in Treg cells induces the nuclear translocation of serine/threonine kinase 4 (Stk4), leading to the formation of an Stk4–NF-κB p65–Foxp3 complex that regulates Foxp3- and p65-dependent transcriptional programs. This complex was stabilized by Stk4-dependent phosphorylation of Foxp3 on serine-418. Stk4 deficiency in Treg cells, either alone or in combination with its homolog Stk3, precipitated a fatal autoimmune lymphoproliferative disease in mice characterized by decreased Treg cell p65 expression and nuclear translocation, impaired NF-κB p65–Foxp3 complex formation, and defective Treg cell activation. In an adoptive immunotherapy model, overexpression of p65 or the phosphomimetic Foxp3S418E in Stk3/4-deficient Treg cells ameliorated their immune regulatory defects. Our studies identify Stk4 as an essential TCR-responsive regulator of p65-Foxp3–dependent transcription that promotes Treg cell–mediated immune tolerance. Description Stk4 combines with NF-κB and Foxp3 in a TCR-regulated trimolecular complex to mediate Treg cell activation and homeostasis. Transcriptional complexes in Treg cells Studies in individuals with a deficiency in the serine/threonine kinase 4 (STK4) and in mice lacking Stk3/4 have linked this kinase to Treg cell function, and Cui et al. now describe a role of Stk4 in regulating Treg cell transcriptional programs. T cell receptor (TCR) signaling in Treg cell–induced nuclear translocation of Stk4 and formation of a trimolecular complex composed of Stk4, NF-κB, and Foxp3. Stk4 phosphorylated Foxp3 on serine-418, which facilitated stable complex formation, and this complex regulated both Foxp3- and p65-dependent transcriptional activities. Mice with Stk3/4-deficient Treg cells failed to form this complex, had defects in Treg cell activation and function, and developed a lethal autoimmune lymphoproliferative disorder. Overexpression of p65 or expression of the phosphomimetic Foxp3S418E restored the defective Treg cell function in vivo. These findings highlight a role for Stk4 in regulating Treg cell transcription.

[1]  S. Özen,et al.  Diversity in STK4 Deficiency and Review of the Literature. , 2021, The journal of allergy and clinical immunology. In practice.

[2]  A. Rudensky,et al.  Roles of Regulatory T Cells in Tissue Pathophysiology and Metabolism. , 2020, Cell metabolism.

[3]  C. Benoist,et al.  The NF-κB RelA Transcription Factor Is Critical for Regulatory T Cell Activation and Stability , 2019, Front. Immunol..

[4]  T. Chatila,et al.  Regulatory T Cells: the Many Faces of Foxp3 , 2019, Journal of Clinical Immunology.

[5]  A. Kundaje,et al.  The ENCODE Blacklist: Identification of Problematic Regions of the Genome , 2019, Scientific Reports.

[6]  G. Blanchard-Rohner,et al.  Germline CBM-opathies: From immunodeficiency to atopy. , 2019, The Journal of allergy and clinical immunology.

[7]  Chad J. Miller,et al.  Comprehensive profiling of the STE20 kinase family defines features essential for selective substrate targeting and signaling output , 2019, PLoS biology.

[8]  Howard Y. Chang,et al.  A Mutation in the Transcription Factor Foxp3 Drives T Helper 2 Effector Function in Regulatory T Cells , 2019, Immunity.

[9]  Peter Vogel,et al.  Hippo Kinases Mst1 and Mst2 Sense and Amplify IL‐2R‐STAT5 Signaling in Regulatory T Cells to Establish Stable Regulatory Activity , 2018, Immunity.

[10]  H. Chi,et al.  Hippo/Mst signalling couples metabolic state and immune function of CD8α+ dendritic cells , 2018, Nature.

[11]  P. Carmeliet,et al.  Functional Reprogramming of Regulatory T cells in the absence of Foxp3 , 2019, Nature Immunology.

[12]  R. Rabadán,et al.  An NF-κB Transcription-Factor-Dependent Lineage-Specific Transcriptional Program Promotes Regulatory T Cell Identity and Function. , 2017, Immunity.

[13]  C. Benoist,et al.  Different molecular complexes that mediate transcriptional induction and repression by FoxP3 , 2017, Nature Immunology.

[14]  Marco Y. Hein,et al.  The Perseus computational platform for comprehensive analysis of (prote)omics data , 2016, Nature Methods.

[15]  Måns Magnusson,et al.  MultiQC: summarize analysis results for multiple tools and samples in a single report , 2016, Bioinform..

[16]  A. Rudensky,et al.  T cell receptor signalling in the control of regulatory T cell differentiation and function , 2016, Nature Reviews Immunology.

[17]  Jun Yu,et al.  International Journal of Molecular Sciences the Tead Family and Its Oncogenic Role in Promoting Tumorigenesis , 2022 .

[18]  Jiang Li,et al.  Mammalian Sterile 20-like Kinase 1 (Mst1) Enhances the Stability of Forkhead Box P3 (Foxp3) and the Function of Regulatory T Cells by Modulating Foxp3 Acetylation* , 2015, The Journal of Biological Chemistry.

[19]  L. Hui,et al.  STK4 regulates TLR pathways and protects against chronic inflammation-related hepatocellular carcinoma. , 2015, The Journal of clinical investigation.

[20]  T. Chatila,et al.  Control of peripheral tolerance by regulatory T cell-intrinsic Notch signaling , 2015, Nature Immunology.

[21]  Qing-Yu He,et al.  ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization , 2015, Bioinform..

[22]  D. Wallace,et al.  Essential role of mitochondrial energy metabolism in Foxp3+ T‐regulatory cell function and allograft survival , 2015, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[23]  A. Rudensky,et al.  Continuous requirement for the T cell receptor for regulatory T cell function , 2014, Nature Immunology.

[24]  A. Quinlan BEDTools: The Swiss‐Army Tool for Genome Feature Analysis , 2014, Current protocols in bioinformatics.

[25]  Eric Nestler,et al.  ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases , 2014, BMC Genomics.

[26]  Yonggang Zheng,et al.  Spatial Organization of Hippo Signaling at the Plasma Membrane Mediated by the Tumor Suppressor Merlin/NF2 , 2013, Cell.

[27]  Shian Wu,et al.  The Hippo effector Yorkie controls normal tissue growth by antagonizing scalloped-mediated default repression. , 2013, Developmental cell.

[28]  T. Pawson,et al.  Yap- and Cdc42-Dependent Nephrogenesis and Morphogenesis during Mouse Kidney Development , 2013, PLoS genetics.

[29]  H. Nie,et al.  Phosphorylation of FOXP3 controls regulatory T cell function and is inhibited by TNF-α in rheumatoid arthritis , 2013, Nature Medicine.

[30]  Yong Zhang,et al.  Identifying ChIP-seq enrichment using MACS , 2012, Nature Protocols.

[31]  A. Fischer,et al.  Inherited MST1 Deficiency Underlies Susceptibility to EV-HPV Infections , 2012, PloS one.

[32]  T. Chatila,et al.  MyD88 is critically involved in immune tolerance breakdown at environmental interfaces of Foxp3-deficient mice. , 2012, The Journal of clinical investigation.

[33]  F. Rieux-Laucat,et al.  MST1 mutations in autosomal recessive primary immunodeficiency characterized by defective naive T-cell survival. , 2012, Blood.

[34]  A. Rudensky,et al.  Regulatory T cells: mechanisms of differentiation and function. , 2012, Annual review of immunology.

[35]  Steven L Salzberg,et al.  Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.

[36]  K. Katagiri,et al.  Mst1 regulates integrin-dependent thymocyte trafficking and antigen recognition in the thymus , 2012, Nature Communications.

[37]  A. Schäffer,et al.  The phenotype of human STK4 deficiency. , 2011, Blood.

[38]  T. Chatila,et al.  A requisite role for induced regulatory T cells in tolerance based on expanding antigen receptor diversity. , 2011, Immunity.

[39]  Thomas M Green,et al.  A public genome-scale lentiviral expression library of human ORFs , 2011, Nature Methods.

[40]  Marcel Martin Cutadapt removes adapter sequences from high-throughput sequencing reads , 2011 .

[41]  Randy L. Johnson,et al.  Hippo Pathway Inhibits Wnt Signaling to Restrain Cardiomyocyte Proliferation and Heart Size , 2011, Science.

[42]  J. Rathmell,et al.  Cutting Edge: Distinct Glycolytic and Lipid Oxidative Metabolic Programs Are Essential for Effector and Regulatory CD4+ T Cell Subsets , 2011, The Journal of Immunology.

[43]  Ju-Seog Lee,et al.  Hippo signaling is a potent in vivo growth and tumor suppressor pathway in the mammalian liver , 2010, Proceedings of the National Academy of Sciences.

[44]  S. Ghosh,et al.  Nuclear factor-kappaB modulates regulatory T cell development by directly regulating expression of Foxp3 transcription factor. , 2009, Immunity.

[45]  Gonçalo R. Abecasis,et al.  The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..

[46]  Jiandie D. Lin,et al.  TEAD mediates YAP-dependent gene induction and growth control. , 2008, Genes & development.

[47]  E. Chi,et al.  Regulatory T cell-derived interleukin-10 limits inflammation at environmental interfaces. , 2008, Immunity.

[48]  J. Avruch,et al.  MOBKL1A/MOBKL1B Phosphorylation by MST1 and MST2 Inhibits Cell Proliferation , 2008, Current Biology.

[49]  Christophe Benoist,et al.  Foxp3 transcription-factor-dependent and -independent regulation of the regulatory T cell transcriptional signature. , 2007, Immunity.

[50]  Li Li,et al.  Inactivation of YAP oncoprotein by the Hippo pathway is involved in cell contact inhibition and tissue growth control. , 2007, Genes & development.

[51]  J. Stroud,et al.  FOXP3 Controls Regulatory T Cell Function through Cooperation with NFAT , 2006, Cell.

[52]  B. Hemmings,et al.  The human tumour suppressor LATS1 is activated by human MOB1 at the membrane. , 2006, Biochemical and biophysical research communications.

[53]  A. Hoffmann,et al.  A c-Rel subdomain responsible for enhanced DNA-binding affinity and selective gene activation. , 2005, Genes & development.

[54]  L. Kinnunen,et al.  NF-κB Is Transported into the Nucleus by Importin α3 and Importin α4* , 2005, Journal of Biological Chemistry.

[55]  S. Saccani,et al.  Degradation of Promoter-bound p65/RelA Is Essential for the Prompt Termination of the Nuclear Factor κB Response , 2004, The Journal of experimental medicine.

[56]  B. Wang,et al.  The Drosophila Ste20 family kinase dMST functions as a tumor suppressor by restricting cell proliferation and promoting apoptosis. , 2003, Genes & development.

[57]  G. Rodan,et al.  Mapping of MST1 Kinase Sites of Phosphorylation , 2002, The Journal of Biological Chemistry.

[58]  S. Yonehara,et al.  Phosphorylation and Dimerization Regulate Nucleocytoplasmic Shuttling of Mammalian STE20-like Kinase (MST)* , 2002, The Journal of Biological Chemistry.

[59]  A. Bowcock,et al.  JM2, encoding a fork head-related protein, is mutated in X-linked autoimmunity-allergic disregulation syndrome. , 2000, The Journal of clinical investigation.

[60]  R. Naviaux,et al.  The pCL vector system: rapid production of helper-free, high-titer, recombinant retroviruses , 1996, Journal of virology.

[61]  C. Benoist,et al.  Tissue Tregs. , 2016, Annual review of immunology.

[62]  J. Casanova,et al.  X-linked neonatal diabetes mellitus, enteropathy and endocrinopathy syndrome is the human equivalent of mouse scurfy , 2001, Nature Genetics.

[63]  H. Ochs,et al.  The immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome (IPEX) is caused by mutations of FOXP3 , 2001, Nature Genetics.